RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 FAM231DQ6ZW35 169 aa9.99□□□□□ -0.81
ATG4D-207ENST00000587256 NTF3P20783 257 aa9.98□□□□□ -0.81
ATG4D-207ENST00000587256 LAGE3Q14657 143 aa9.98□□□□□ -0.81
ATG4D-207ENST00000587256 TWIST1Q15672 202 aa9.98□□□□□ -0.81
ATG4D-207ENST00000587256 KCNIP4Q6PIL6 250 aa9.98□□□□□ -0.81
ATG4D-207ENST00000587256 LINC01551Q86U37 167 aa9.98□□□□□ -0.81
ATG4D-207ENST00000587256 DPH3P1Q9H4G8 78 aa9.98□□□□□ -0.81
ATG4D-207ENST00000587256 SUMO4Q6EEV6 95 aa9.97□□□□□ -0.81
ATG4D-207ENST00000587256 GTSF1Q8WW33 167 aa9.97□□□□□ -0.81
ATG4D-207ENST00000587256 A0A087WX48 190 aa9.96□□□□□ -0.82
ATG4D-207ENST00000587256 A8MWL6 223 aa9.96□□□□□ -0.82
ATG4D-207ENST00000587256 KRTAP10-2P60368 255 aa9.96□□□□□ -0.82
ATG4D-207ENST00000587256 CT83Q5H943 113 aa9.96□□□□□ -0.82
ATG4D-207ENST00000587256 WDR73Q6P4I2 378 aa9.96□□□□□ -0.82
ATG4D-207ENST00000587256 DAZ4Q86SG3 579 aaKnown RBP9.96□□□□□ -0.82
ATG4D-207ENST00000587256 NIT1Q86X76 327 aa9.96□□□□□ -0.82
ATG4D-207ENST00000587256 CNFNQ9BYD5 112 aa9.96□□□□□ -0.82
ATG4D-207ENST00000587256 DAZ3Q9NR90 486 aaKnown RBP9.96□□□□□ -0.82
ATG4D-207ENST00000587256 A0A087WTM6 91 aa9.95□□□□□ -0.82
ATG4D-207ENST00000587256 TRBV6-8A0A0A6YYG3 113 aa9.95□□□□□ -0.82
ATG4D-207ENST00000587256 M0QY20 66 aa9.95□□□□□ -0.82
ATG4D-207ENST00000587256 PEA15Q15121 130 aa9.95□□□□□ -0.82
ATG4D-207ENST00000587256 FAM74A3Q4VXF1 159 aa9.95□□□□□ -0.82
ATG4D-207ENST00000587256 SMIM15Q7Z3B0 74 aa9.95□□□□□ -0.82
ATG4D-207ENST00000587256 BORCS7Q96B45 105 aa9.95□□□□□ -0.82
ATG4D-207ENST00000587256 PGLYRP4Q96LB8 373 aa9.95□□□□□ -0.82
ATG4D-207ENST00000587256 TRAV8-3A0A0A6YYJ7 113 aa9.94□□□□□ -0.82
ATG4D-207ENST00000587256 TMEM97Q5BJF2 176 aa9.94□□□□□ -0.82
ATG4D-207ENST00000587256 RASL11AQ6T310 242 aa9.94□□□□□ -0.82
ATG4D-207ENST00000587256 C15orf54Q8N8G6 183 aa9.94□□□□□ -0.82
ATG4D-207ENST00000587256 DNAJC30Q96LL9 226 aa9.94□□□□□ -0.82
ATG4D-207ENST00000587256 CHCHD5Q9BSY4 110 aa9.94□□□□□ -0.82
ATG4D-207ENST00000587256 CHCHD7Q9BUK0 85 aa9.94□□□□□ -0.82
ATG4D-207ENST00000587256 TMEM262E9PQX1 116 aa9.93□□□□□ -0.82
ATG4D-207ENST00000587256 ADIRFQ15847 76 aa9.93□□□□□ -0.82
ATG4D-207ENST00000587256 TMEM241Q24JQ0 296 aa9.93□□□□□ -0.82
ATG4D-207ENST00000587256 TM2D2Q9BX73 214 aa9.93□□□□□ -0.82
ATG4D-207ENST00000587256 OSTCQ9NRP0 149 aa9.93□□□□□ -0.82
ATG4D-207ENST00000587256 C9JQL5 133 aa9.92□□□□□ -0.82
ATG4D-207ENST00000587256 PKIAP61925 76 aa9.92□□□□□ -0.82
ATG4D-207ENST00000587256 SRSF3P84103 164 aaKnown RBP9.92□□□□□ -0.82
ATG4D-207ENST00000587256 ELOBQ15370 118 aa9.92□□□□□ -0.82
ATG4D-207ENST00000587256 TSKUQ8WUA8 353 aa9.92□□□□□ -0.82
ATG4D-207ENST00000587256 NAT8Q9UHE5 227 aa9.92□□□□□ -0.82
ATG4D-207ENST00000587256 KLK12Q9UKR0 248 aa9.92□□□□□ -0.82
ATG4D-207ENST00000587256 RYR1P21817 5038 aa9.91□□□□□ -0.82
ATG4D-207ENST00000587256 LRP1BQ9NZR2 4599 aa9.91□□□□□ -0.82
ATG4D-207ENST00000587256 TRBV25-1A0A075B6N4 114 aa9.91□□□□□ -0.82
ATG4D-207ENST00000587256 HIGD1CA8MV81 97 aa9.91□□□□□ -0.82
ATG4D-207ENST00000587256 RPL23P62829 140 aaKnown RBP9.91□□□□□ -0.82
ATG4D-207ENST00000587256 CDPF1Q6NVV7 123 aa9.91□□□□□ -0.82
ATG4D-207ENST00000587256 ISOC2Q96AB3 205 aa9.91□□□□□ -0.82
ATG4D-207ENST00000587256 RMI2Q96E14 147 aa9.91□□□□□ -0.82
ATG4D-207ENST00000587256 GFRA4Q9GZZ7 299 aa9.91□□□□□ -0.82
ATG4D-207ENST00000587256 SMDT1Q9H4I9 107 aa9.91□□□□□ -0.82
ATG4D-207ENST00000587256 NIT2Q9NQR4 276 aa9.91□□□□□ -0.82
ATG4D-207ENST00000587256 TRAV26-2A0A0B4J265 109 aa9.9□□□□□ -0.82
ATG4D-207ENST00000587256 CRPP02741 224 aa9.9□□□□□ -0.82
ATG4D-207ENST00000587256 FUSP35637 526 aaKnown RBP eCLIP9.9□□□□□ -0.82
ATG4D-207ENST00000587256 RAB14P61106 215 aa9.9□□□□□ -0.82
ATG4D-207ENST00000587256 MPV17L2Q567V2 206 aa9.9□□□□□ -0.82
ATG4D-207ENST00000587256 UBE2WQ96B02 151 aa9.9□□□□□ -0.82
ATG4D-207ENST00000587256 PGPEP1Q9NXJ5 209 aa9.9□□□□□ -0.82
ATG4D-207ENST00000587256 DNAH5Q8TE73 4624 aa9.9□□□□□ -0.82
ATG4D-207ENST00000587256 IGHV1-24A0A0C4DH33 117 aa9.89□□□□□ -0.83
ATG4D-207ENST00000587256 A0A1B0GUT8 65 aa9.89□□□□□ -0.83
ATG4D-207ENST00000587256 FAM231BA6NCW3 169 aa9.89□□□□□ -0.83
ATG4D-207ENST00000587256 NTM-AS1Q6ZSK4 140 aa9.89□□□□□ -0.83
ATG4D-207ENST00000587256 COX11Q9Y6N1 276 aa9.89□□□□□ -0.83
ATG4D-207ENST00000587256 V9GYV3 84 aa9.89□□□□□ -0.83
ATG4D-207ENST00000587256 IGKV2D-24A0A075B6R9 120 aa9.88□□□□□ -0.83
ATG4D-207ENST00000587256 ANGP03950 147 aaKnown RBP9.88□□□□□ -0.83
ATG4D-207ENST00000587256 FOXA3P55318 350 aaPredicted RBP9.88□□□□□ -0.83
ATG4D-207ENST00000587256 GAGE6Q13070 117 aa9.88□□□□□ -0.83
ATG4D-207ENST00000587256 IQCJQ1A5X6 159 aa9.88□□□□□ -0.83
ATG4D-207ENST00000587256 GATD1Q8NB37 220 aa9.88□□□□□ -0.83
ATG4D-207ENST00000587256 LRCOL1A6NCL2 159 aa9.87□□□□□ -0.83
ATG4D-207ENST00000587256 Q8N976 141 aa9.87□□□□□ -0.83
ATG4D-207ENST00000587256 FRZBQ92765 325 aa9.87□□□□□ -0.83
ATG4D-207ENST00000587256 CDK2AP2O75956 126 aa9.86□□□□□ -0.83
ATG4D-207ENST00000587256 Q0VG73 95 aa9.86□□□□□ -0.83
ATG4D-207ENST00000587256 COTL1Q14019 142 aa9.86□□□□□ -0.83
ATG4D-207ENST00000587256 ATRAIDQ6UW56 229 aa9.86□□□□□ -0.83
ATG4D-207ENST00000587256 Q8N814 137 aa9.86□□□□□ -0.83
ATG4D-207ENST00000587256 DEFB104AQ8WTQ1 72 aa9.86□□□□□ -0.83
ATG4D-207ENST00000587256 RPL39LQ96EH5 51 aaKnown RBP9.86□□□□□ -0.83
ATG4D-207ENST00000587256 TMEM243Q9BU79 118 aa9.86□□□□□ -0.83
ATG4D-207ENST00000587256 NAT8BQ9UHF3 227 aa9.86□□□□□ -0.83
ATG4D-207ENST00000587256 IGLV5-52A0A0A0MRZ9 124 aa9.85□□□□□ -0.83
ATG4D-207ENST00000587256 LECT2O14960 151 aa9.85□□□□□ -0.83
ATG4D-207ENST00000587256 AMTP48728 403 aa9.85□□□□□ -0.83
ATG4D-207ENST00000587256 RBX1P62877 108 aa9.85□□□□□ -0.83
ATG4D-207ENST00000587256 RIGQ13278 110 aa9.85□□□□□ -0.83
ATG4D-207ENST00000587256 NUP35Q8NFH5 326 aa9.85□□□□□ -0.83
ATG4D-207ENST00000587256 NTN5Q8WTR8 489 aaPredicted RBP9.85□□□□□ -0.83
ATG4D-207ENST00000587256 C1orf43Q9BWL3 253 aa9.85□□□□□ -0.83
ATG4D-207ENST00000587256 TMEM191AQ9H0A3 160 aa9.85□□□□□ -0.83
ATG4D-207ENST00000587256 UBE2L6O14933 153 aa9.84□□□□□ -0.83
ATG4D-207ENST00000587256 CLPSL2Q6UWE3 100 aa9.84□□□□□ -0.83
ATG4D-207ENST00000587256 APOBP04114 4563 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms