RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 ZNF56Q15929 161 aa9.24□□□□□ -0.93
HDAC5-203ENST00000586339 TRBV6-8A0A0A6YYG3 113 aa9.23□□□□□ -0.93
HDAC5-203ENST00000586339 RBFOX3A6NFN3 312 aa9.23□□□□□ -0.93
HDAC5-203ENST00000586339 OR5AL1P0C617 328 aa9.23□□□□□ -0.93
HDAC5-203ENST00000586339 C14orf177Q52M58 125 aa9.23□□□□□ -0.93
HDAC5-203ENST00000586339 CENPWQ5EE01 88 aa9.23□□□□□ -0.93
HDAC5-203ENST00000586339 LINC00528Q8N1L1 170 aa9.23□□□□□ -0.93
HDAC5-203ENST00000586339 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.23□□□□□ -0.93
HDAC5-203ENST00000586339 OR10AG1Q8NH19 301 aa9.23□□□□□ -0.93
HDAC5-203ENST00000586339 SSBP4Q9BWG4 385 aaPredicted RBP9.23□□□□□ -0.93
HDAC5-203ENST00000586339 TRBV20OR9-2A0A075B6H5 130 aa9.22□□□□□ -0.93
HDAC5-203ENST00000586339 MUC21A0A0G2JKD1 596 aa9.22□□□□□ -0.93
HDAC5-203ENST00000586339 MUC21A0A140T8X8 626 aa9.22□□□□□ -0.93
HDAC5-203ENST00000586339 A0A1B0GVG6 124 aa9.22□□□□□ -0.93
HDAC5-203ENST00000586339 RAB19A4D1S5 217 aa9.22□□□□□ -0.93
HDAC5-203ENST00000586339 TEX46H3BTG2 121 aa9.22□□□□□ -0.93
HDAC5-203ENST00000586339 MEF2BQ02080 365 aaPredicted RBP9.22□□□□□ -0.93
HDAC5-203ENST00000586339 TMEM97Q5BJF2 176 aa9.22□□□□□ -0.93
HDAC5-203ENST00000586339 NEXN-AS1Q8NBZ9 246 aa9.22□□□□□ -0.93
HDAC5-203ENST00000586339 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
HDAC5-203ENST00000586339 CRPP02741 224 aa9.21□□□□□ -0.94
HDAC5-203ENST00000586339 BCL2P10415 239 aa9.21□□□□□ -0.94
HDAC5-203ENST00000586339 SPANXN1Q5VSR9 72 aa9.21□□□□□ -0.94
HDAC5-203ENST00000586339 SCXQ7RTU7 201 aa9.21□□□□□ -0.94
HDAC5-203ENST00000586339 DNAJC30Q96LL9 226 aa9.21□□□□□ -0.94
HDAC5-203ENST00000586339 TMEM262E9PQX1 116 aa9.2□□□□□ -0.94
HDAC5-203ENST00000586339 IFNA1P01562 189 aa9.2□□□□□ -0.94
HDAC5-203ENST00000586339 GZMBP10144 247 aa9.2□□□□□ -0.94
HDAC5-203ENST00000586339 ALKAL2Q6UX46 152 aa9.2□□□□□ -0.94
HDAC5-203ENST00000586339 AP1S3Q96PC3 154 aa9.2□□□□□ -0.94
HDAC5-203ENST00000586339 VAX2Q9UIW0 290 aa9.2□□□□□ -0.94
HDAC5-203ENST00000586339 C19orf71A6NCJ1 209 aa9.19□□□□□ -0.94
HDAC5-203ENST00000586339 J3QL48 77 aa9.19□□□□□ -0.94
HDAC5-203ENST00000586339 PDE6DO43924 150 aa9.19□□□□□ -0.94
HDAC5-203ENST00000586339 NKX2-5P52952 324 aaPredicted RBP9.19□□□□□ -0.94
HDAC5-203ENST00000586339 SSTP61278 116 aa9.19□□□□□ -0.94
HDAC5-203ENST00000586339 MPV17L2Q567V2 206 aa9.19□□□□□ -0.94
HDAC5-203ENST00000586339 DEFB104AQ8WTQ1 72 aa9.19□□□□□ -0.94
HDAC5-203ENST00000586339 CHAC1Q9BUX1 264 aa9.19□□□□□ -0.94
HDAC5-203ENST00000586339 MED9Q9NWA0 146 aa9.19□□□□□ -0.94
HDAC5-203ENST00000586339 ANGP03950 147 aaKnown RBP9.18□□□□□ -0.94
HDAC5-203ENST00000586339 SMIM17P0DL12 118 aa9.18□□□□□ -0.94
HDAC5-203ENST00000586339 GNG4P50150 75 aa9.18□□□□□ -0.94
HDAC5-203ENST00000586339 MIAQ16674 131 aa9.18□□□□□ -0.94
HDAC5-203ENST00000586339 LINC01620Q4KN68 170 aa9.18□□□□□ -0.94
HDAC5-203ENST00000586339 ENHOQ6UWT2 76 aa9.18□□□□□ -0.94
HDAC5-203ENST00000586339 C15orf54Q8N8G6 183 aa9.18□□□□□ -0.94
HDAC5-203ENST00000586339 KRTAP29-1A8MX34 341 aaPredicted RBP9.17□□□□□ -0.94
HDAC5-203ENST00000586339 F5H697 171 aa9.17□□□□□ -0.94
HDAC5-203ENST00000586339 IGLC6P0CF74 106 aa9.17□□□□□ -0.94
HDAC5-203ENST00000586339 OR2D3Q8NGH3 330 aa9.17□□□□□ -0.94
HDAC5-203ENST00000586339 SMIM12Q96EX1 92 aa9.17□□□□□ -0.94
HDAC5-203ENST00000586339 CHCHD5Q9BSY4 110 aa9.17□□□□□ -0.94
HDAC5-203ENST00000586339 KIF25-AS1Q9Y6Z4 181 aa9.17□□□□□ -0.94
HDAC5-203ENST00000586339 TRBV25-1A0A075B6N4 114 aa9.16□□□□□ -0.94
HDAC5-203ENST00000586339 H7C1H1 209 aa9.15□□□□□ -0.94
HDAC5-203ENST00000586339 RPS20P60866 119 aaKnown RBP9.15□□□□□ -0.94
HDAC5-203ENST00000586339 NTM-AS1Q6ZSK4 140 aa9.15□□□□□ -0.94
HDAC5-203ENST00000586339 FER1L6-AS1Q8NA97 138 aa9.15□□□□□ -0.94
HDAC5-203ENST00000586339 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
HDAC5-203ENST00000586339 DAZAP1Q96EP5 407 aaKnown RBP9.15□□□□□ -0.94
HDAC5-203ENST00000586339 TPPP3Q9BW30 176 aa9.15□□□□□ -0.94
HDAC5-203ENST00000586339 PRR34Q9NV39 138 aa9.15□□□□□ -0.94
HDAC5-203ENST00000586339 LRP1Q07954 4544 aaKnown RBP9.14□□□□□ -0.95
HDAC5-203ENST00000586339 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
HDAC5-203ENST00000586339 K7EN84 100 aa9.14□□□□□ -0.95
HDAC5-203ENST00000586339 P01737 135 aa9.14□□□□□ -0.95
HDAC5-203ENST00000586339 HLA-DQA1P01909 254 aa9.14□□□□□ -0.95
HDAC5-203ENST00000586339 CACNG7P62955 275 aa9.14□□□□□ -0.95
HDAC5-203ENST00000586339 IQCJQ1A5X6 159 aa9.14□□□□□ -0.95
HDAC5-203ENST00000586339 LYPD6BQ8NI32 183 aa9.14□□□□□ -0.95
HDAC5-203ENST00000586339 XKRY2A2RUG3 117 aa9.13□□□□□ -0.95
HDAC5-203ENST00000586339 TAGLN2P37802 199 aaKnown RBP9.13□□□□□ -0.95
HDAC5-203ENST00000586339 KRTAP10-4P60372 401 aaPredicted RBP9.13□□□□□ -0.95
HDAC5-203ENST00000586339 RBX1P62877 108 aa9.13□□□□□ -0.95
HDAC5-203ENST00000586339 BLOC1S1P78537 153 aa9.13□□□□□ -0.95
HDAC5-203ENST00000586339 DGAT2L7PQ6IED9 249 aa9.13□□□□□ -0.95
HDAC5-203ENST00000586339 NUDT10Q8NFP7 164 aa9.13□□□□□ -0.95
HDAC5-203ENST00000586339 OCC1Q8TAD7 63 aa9.13□□□□□ -0.95
HDAC5-203ENST00000586339 NUDT11Q96G61 164 aa9.13□□□□□ -0.95
HDAC5-203ENST00000586339 FAT3Q8TDW7 4589 aa9.13□□□□□ -0.95
HDAC5-203ENST00000586339 IGHV1-24A0A0C4DH33 117 aa9.12□□□□□ -0.95
HDAC5-203ENST00000586339 M0QY20 66 aa9.12□□□□□ -0.95
HDAC5-203ENST00000586339 LYZL1Q6UWQ5 148 aa9.12□□□□□ -0.95
HDAC5-203ENST00000586339 RNASE7Q9H1E1 156 aaKnown RBP9.12□□□□□ -0.95
HDAC5-203ENST00000586339 PKHD1L1Q86WI1 4243 aa9.12□□□□□ -0.95
HDAC5-203ENST00000586339 F2Z2F3 143 aa9.11□□□□□ -0.95
HDAC5-203ENST00000586339 MGPP08493 103 aa9.11□□□□□ -0.95
HDAC5-203ENST00000586339 LINC00269Q8N2A0 174 aa9.11□□□□□ -0.95
HDAC5-203ENST00000586339 BIN3Q9NQY0 253 aa9.11□□□□□ -0.95
HDAC5-203ENST00000586339 TMEM250H0YL14 139 aa9.1□□□□□ -0.95
HDAC5-203ENST00000586339 PRSS1P07477 247 aa9.1□□□□□ -0.95
HDAC5-203ENST00000586339 TRGC1P0CF51 173 aa9.1□□□□□ -0.95
HDAC5-203ENST00000586339 GAGE6Q13070 117 aa9.1□□□□□ -0.95
HDAC5-203ENST00000586339 SUMO4Q6EEV6 95 aa9.1□□□□□ -0.95
HDAC5-203ENST00000586339 KRTAP26-1Q6PEX3 210 aa9.1□□□□□ -0.95
HDAC5-203ENST00000586339 C9orf163Q8N9P6 203 aa9.1□□□□□ -0.95
HDAC5-203ENST00000586339 RPP21Q9H633 154 aaKnown RBP9.1□□□□□ -0.95
HDAC5-203ENST00000586339 TRAV8-4A0A0B4J246 113 aa9.09□□□□□ -0.95
HDAC5-203ENST00000586339 NTF3P20783 257 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms