RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PROP1O75360 226 aa9.96□□□□□ -0.81
RNF43-208ENST00000584437 C9orf66Q5T8R8 295 aa9.96□□□□□ -0.81
RNF43-208ENST00000584437 IGHV4-38-2P0DP08 117 aa9.96□□□□□ -0.82
RNF43-208ENST00000584437 PIP4P1Q86T03 277 aa9.96□□□□□ -0.82
RNF43-208ENST00000584437 NEXN-AS1Q8NBZ9 246 aa9.96□□□□□ -0.82
RNF43-208ENST00000584437 HHLA3Q9XRX5 114 aa9.96□□□□□ -0.82
RNF43-208ENST00000584437 MGAMO43451 1857 aa9.96□□□□□ -0.82
RNF43-208ENST00000584437 A0A0J9YX75 114 aa9.96□□□□□ -0.82
RNF43-208ENST00000584437 KIAA1671Q9BY89 1806 aa9.96□□□□□ -0.82
RNF43-208ENST00000584437 IGHV4-61A0A0C4DH41 118 aa9.96□□□□□ -0.82
RNF43-208ENST00000584437 RBX1P62877 108 aa9.96□□□□□ -0.82
RNF43-208ENST00000584437 UPK3BQ9BT76 320 aa9.96□□□□□ -0.82
RNF43-208ENST00000584437 IGHV4OR15-8A0A075B7B6 117 aa9.95□□□□□ -0.82
RNF43-208ENST00000584437 A0A087WW49 117 aa9.95□□□□□ -0.82
RNF43-208ENST00000584437 DYSFO75923 2080 aa9.95□□□□□ -0.82
RNF43-208ENST00000584437 CLPSL1A2RUU4 121 aa9.95□□□□□ -0.82
RNF43-208ENST00000584437 WT1P19544 449 aaPredicted RBP9.95□□□□□ -0.82
RNF43-208ENST00000584437 ZNF80P51504 273 aaPredicted RBP9.95□□□□□ -0.82
RNF43-208ENST00000584437 TEX49A0A1B0GTD5 131 aa9.94□□□□□ -0.82
RNF43-208ENST00000584437 P0DMU3 169 aa9.94□□□□□ -0.82
RNF43-208ENST00000584437 FAM231AP0DMU4 169 aa9.94□□□□□ -0.82
RNF43-208ENST00000584437 FAM231CP0DMU5 169 aa9.94□□□□□ -0.82
RNF43-208ENST00000584437 C3orf22Q8N5N4 141 aa9.94□□□□□ -0.82
RNF43-208ENST00000584437 Q8N7P7 452 aa9.94□□□□□ -0.82
RNF43-208ENST00000584437 ZNF295-AS1Q8N0V1 137 aa9.94□□□□□ -0.82
RNF43-208ENST00000584437 LINC00574Q9H8X3 128 aa9.94□□□□□ -0.82
RNF43-208ENST00000584437 TRAV23DV6A0A075B6W5 121 aa9.94□□□□□ -0.82
RNF43-208ENST00000584437 COX7BP24311 80 aa9.93□□□□□ -0.82
RNF43-208ENST00000584437 GRNP28799 593 aaKnown RBP9.93□□□□□ -0.82
RNF43-208ENST00000584437 ODF3Q96PU9 254 aa9.93□□□□□ -0.82
RNF43-208ENST00000584437 ZMAT4Q9H898 229 aa9.93□□□□□ -0.82
RNF43-208ENST00000584437 IGHV3-30P01768 117 aa9.93□□□□□ -0.82
RNF43-208ENST00000584437 IGHV3-33P01772 117 aa9.93□□□□□ -0.82
RNF43-208ENST00000584437 IGHV3-30-5P0DP03 117 aa9.93□□□□□ -0.82
RNF43-208ENST00000584437 FAM236DA0A1B0GTK5 79 aa9.93□□□□□ -0.82
RNF43-208ENST00000584437 PRB2P02812 416 aaPredicted RBP9.93□□□□□ -0.82
RNF43-208ENST00000584437 FAM236CP0DP71 79 aa9.93□□□□□ -0.82
RNF43-208ENST00000584437 MED13LQ71F56 2210 aa9.93□□□□□ -0.82
RNF43-208ENST00000584437 C20orf197Q8N268 126 aa9.93□□□□□ -0.82
RNF43-208ENST00000584437 TP53TG3Q9ULZ0 132 aa9.92□□□□□ -0.82
RNF43-208ENST00000584437 IGKV2D-26A0A0A0MRZ7 120 aa9.92□□□□□ -0.82
RNF43-208ENST00000584437 TRBV30A0A0K0K1B3 111 aa9.92□□□□□ -0.82
RNF43-208ENST00000584437 TMEM263Q8WUH6 116 aaKnown RBP9.92□□□□□ -0.82
RNF43-208ENST00000584437 CCL18P55774 89 aa9.92□□□□□ -0.82
RNF43-208ENST00000584437 IGF2-ASQ6U949 168 aa9.92□□□□□ -0.82
RNF43-208ENST00000584437 BPY2O14599 106 aa9.91□□□□□ -0.82
RNF43-208ENST00000584437 OBSL1O75147 1896 aa9.91□□□□□ -0.82
RNF43-208ENST00000584437 BRWD1-AS2P59051 145 aa9.91□□□□□ -0.82
RNF43-208ENST00000584437 U3KQK5 164 aa9.91□□□□□ -0.82
RNF43-208ENST00000584437 TANC1Q9C0D5 1861 aa9.91□□□□□ -0.82
RNF43-208ENST00000584437 C10orf105Q8TEF2 133 aa9.9□□□□□ -0.82
RNF43-208ENST00000584437 TMEM223A0PJW6 202 aa9.9□□□□□ -0.82
RNF43-208ENST00000584437 ZGRF1Q86YA3 2104 aa9.9□□□□□ -0.82
RNF43-208ENST00000584437 DENND4CQ5VZ89 1909 aa9.9□□□□□ -0.82
RNF43-208ENST00000584437 IMUPQ9GZP8 106 aa9.9□□□□□ -0.82
RNF43-208ENST00000584437 DEFB1P60022 68 aa9.9□□□□□ -0.82
RNF43-208ENST00000584437 FAM110AQ9BQ89 295 aa9.9□□□□□ -0.82
RNF43-208ENST00000584437 IGHV4-30-2A0A087WSY4 118 aa9.9□□□□□ -0.83
RNF43-208ENST00000584437 UNQ9165/PRO28630Q6UXU0 137 aa9.9□□□□□ -0.83
RNF43-208ENST00000584437 ZNF22P17026 224 aaPredicted RBP9.89□□□□□ -0.83
RNF43-208ENST00000584437 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
RNF43-208ENST00000584437 SIRPDQ9H106 197 aa9.89□□□□□ -0.83
RNF43-208ENST00000584437 CEMP1Q6PRD7 247 aaPredicted RBP9.89□□□□□ -0.83
RNF43-208ENST00000584437 PLXNB3Q9ULL4 1909 aa9.89□□□□□ -0.83
RNF43-208ENST00000584437 UFSP1Q6NVU6 142 aa9.89□□□□□ -0.83
RNF43-208ENST00000584437 SEM1Q6ZVN7 128 aa9.89□□□□□ -0.83
RNF43-208ENST00000584437 PRO0255Q9UI72 69 aa9.89□□□□□ -0.83
RNF43-208ENST00000584437 Q6ZPA2 131 aa9.88□□□□□ -0.83
RNF43-208ENST00000584437 SVIPQ8NHG7 77 aa9.88□□□□□ -0.83
RNF43-208ENST00000584437 UBE2AP49459 152 aa9.88□□□□□ -0.83
RNF43-208ENST00000584437 EIF4EBP1Q13541 118 aaPredicted RBP9.88□□□□□ -0.83
RNF43-208ENST00000584437 NUP210Q8TEM1 1887 aaPredicted RBP9.88□□□□□ -0.83
RNF43-208ENST00000584437 MAPKAPK5-AS1Q8N8E1 139 aa9.88□□□□□ -0.83
RNF43-208ENST00000584437 C4orf3Q8WVX3 66 aa9.88□□□□□ -0.83
RNF43-208ENST00000584437 TP73-AS1Q9UF72 201 aa9.88□□□□□ -0.83
RNF43-208ENST00000584437 TRIAP1O43715 76 aa9.88□□□□□ -0.83
RNF43-208ENST00000584437 ZFAND2AQ8N6M9 145 aa9.88□□□□□ -0.83
RNF43-208ENST00000584437 TNRC6BQ9UPQ9 1833 aaKnown RBP9.87□□□□□ -0.83
RNF43-208ENST00000584437 FAM240AA0A1B0GVK7 77 aa9.87□□□□□ -0.83
RNF43-208ENST00000584437 NDUFC2-KCTD14E9PQ53 114 aa9.87□□□□□ -0.83
RNF43-208ENST00000584437 CCDC140Q96MF4 163 aa9.87□□□□□ -0.83
RNF43-208ENST00000584437 ZFP36P26651 326 aaKnown RBP9.87□□□□□ -0.83
RNF43-208ENST00000584437 H7C423 109 aa9.87□□□□□ -0.83
RNF43-208ENST00000584437 LINC00308Q8TCZ7 52 aa9.87□□□□□ -0.83
RNF43-208ENST00000584437 KLK12Q9UKR0 248 aa9.87□□□□□ -0.83
RNF43-208ENST00000584437 IGLV4-3A0A075B6K6 122 aa9.86□□□□□ -0.83
RNF43-208ENST00000584437 MYCNOSP40205 109 aa9.86□□□□□ -0.83
RNF43-208ENST00000584437 ATP5EP56381 51 aaPredicted RBP9.86□□□□□ -0.83
RNF43-208ENST00000584437 FRMPD3Q5JV73 1810 aa9.86□□□□□ -0.83
RNF43-208ENST00000584437 MSMPQ1L6U9 139 aa9.86□□□□□ -0.83
RNF43-208ENST00000584437 CDKN2A-AS1Q9UH64 79 aa9.86□□□□□ -0.83
RNF43-208ENST00000584437 IBA57-AS1B1ANH7 110 aa9.86□□□□□ -0.83
RNF43-208ENST00000584437 DEFB113Q30KQ7 82 aa9.86□□□□□ -0.83
RNF43-208ENST00000584437 SPRY4Q9C004 299 aa9.85□□□□□ -0.83
RNF43-208ENST00000584437 NOTCH4Q99466 2003 aa9.85□□□□□ -0.83
RNF43-208ENST00000584437 COL4A3Q01955 1670 aa9.85□□□□□ -0.83
RNF43-208ENST00000584437 ARHGAP21Q5T5U3 1957 aa9.85□□□□□ -0.83
RNF43-208ENST00000584437 A6NDX4 124 aa9.85□□□□□ -0.83
RNF43-208ENST00000584437 CRIP3Q6Q6R5 217 aa9.85□□□□□ -0.83
RNF43-208ENST00000584437 NDUFC1O43677 76 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms