RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 KIAA1109Q2LD37 5005 aa16.7■□□□□ 0.26
TTC39C-209ENST00000584250 A0A087WWC5 75 aa16.69■□□□□ 0.26
TTC39C-209ENST00000584250 FUSP35637 526 aaKnown RBP eCLIP16.69■□□□□ 0.26
TTC39C-209ENST00000584250 SPATA12Q7Z6I5 190 aa16.69■□□□□ 0.26
TTC39C-209ENST00000584250 FOXA3P55318 350 aaPredicted RBP16.68■□□□□ 0.26
TTC39C-209ENST00000584250 TWIST1Q15672 202 aa16.68■□□□□ 0.26
TTC39C-209ENST00000584250 WDR73Q6P4I2 378 aa16.68■□□□□ 0.26
TTC39C-209ENST00000584250 PGLYRP4Q96LB8 373 aa16.68■□□□□ 0.26
TTC39C-209ENST00000584250 Q9HAA7 133 aa16.68■□□□□ 0.26
TTC39C-209ENST00000584250 TRGC1P0CF51 173 aa16.67■□□□□ 0.26
TTC39C-209ENST00000584250 NFE4Q86UQ8 179 aa16.67■□□□□ 0.26
TTC39C-209ENST00000584250 NIT1Q86X76 327 aa16.67■□□□□ 0.26
TTC39C-209ENST00000584250 A8MWL6 223 aa16.66■□□□□ 0.26
TTC39C-209ENST00000584250 NTM-AS1Q6ZSK4 140 aa16.66■□□□□ 0.26
TTC39C-209ENST00000584250 DPH3P1Q9H4G8 78 aa16.66■□□□□ 0.26
TTC39C-209ENST00000584250 RPL23P62829 140 aaKnown RBP16.65■□□□□ 0.26
TTC39C-209ENST00000584250 TMEM241Q24JQ0 296 aa16.65■□□□□ 0.26
TTC39C-209ENST00000584250 CLLU1Q5K131 121 aa16.65■□□□□ 0.26
TTC39C-209ENST00000584250 DNAJC30Q96LL9 226 aa16.65■□□□□ 0.26
TTC39C-209ENST00000584250 OSTCQ9NRP0 149 aa16.65■□□□□ 0.26
TTC39C-209ENST00000584250 PEA15Q15121 130 aa16.64■□□□□ 0.25
TTC39C-209ENST00000584250 CT83Q5H943 113 aa16.64■□□□□ 0.25
TTC39C-209ENST00000584250 ISOC2Q96AB3 205 aa16.64■□□□□ 0.25
TTC39C-209ENST00000584250 TRBV6-8A0A0A6YYG3 113 aa16.63■□□□□ 0.25
TTC39C-209ENST00000584250 C16orf90A8MZG2 172 aa16.63■□□□□ 0.25
TTC39C-209ENST00000584250 V9GYV3 84 aa16.63■□□□□ 0.25
TTC39C-209ENST00000584250 HERC2O95714 4834 aa16.62■□□□□ 0.25
TTC39C-209ENST00000584250 A0A087WTM6 91 aa16.62■□□□□ 0.25
TTC39C-209ENST00000584250 TRAV26-2A0A0B4J265 109 aa16.62■□□□□ 0.25
TTC39C-209ENST00000584250 DEFB104AQ8WTQ1 72 aa16.62■□□□□ 0.25
TTC39C-209ENST00000584250 ADIRFQ15847 76 aa16.61■□□□□ 0.25
TTC39C-209ENST00000584250 FAM74A3Q4VXF1 159 aa16.61■□□□□ 0.25
TTC39C-209ENST00000584250 RASL11AQ6T310 242 aa16.61■□□□□ 0.25
TTC39C-209ENST00000584250 TSKUQ8WUA8 353 aa16.61■□□□□ 0.25
TTC39C-209ENST00000584250 HIGD1CA8MV81 97 aa16.6■□□□□ 0.25
TTC39C-209ENST00000584250 GATD1Q8NB37 220 aa16.6■□□□□ 0.25
TTC39C-209ENST00000584250 NAT8Q9UHE5 227 aa16.6■□□□□ 0.25
TTC39C-209ENST00000584250 KLK12Q9UKR0 248 aa16.59■□□□□ 0.25
TTC39C-209ENST00000584250 H7C1H1 209 aa16.58■□□□□ 0.24
TTC39C-209ENST00000584250 LAGE3Q14657 143 aa16.58■□□□□ 0.24
TTC39C-209ENST00000584250 SMDT1Q9H4I9 107 aa16.58■□□□□ 0.24
TTC39C-209ENST00000584250 LRCOL1A6NCL2 159 aa16.57■□□□□ 0.24
TTC39C-209ENST00000584250 C15orf54Q8N8G6 183 aa16.57■□□□□ 0.24
TTC39C-209ENST00000584250 NIT2Q9NQR4 276 aa16.57■□□□□ 0.24
TTC39C-209ENST00000584250 URGCP-MRPS24S4R325 110 aa16.57■□□□□ 0.24
TTC39C-209ENST00000584250 LRP1BQ9NZR2 4599 aa16.57■□□□□ 0.24
TTC39C-209ENST00000584250 MPV17L2Q567V2 206 aa16.56■□□□□ 0.24
TTC39C-209ENST00000584250 RPL39LQ96EH5 51 aaKnown RBP16.56■□□□□ 0.24
TTC39C-209ENST00000584250 GFRA4Q9GZZ7 299 aa16.56■□□□□ 0.24
TTC39C-209ENST00000584250 A0A087WX48 190 aa16.55■□□□□ 0.24
TTC39C-209ENST00000584250 TMEM262E9PQX1 116 aa16.55■□□□□ 0.24
TTC39C-209ENST00000584250 PSCAO43653 123 aa16.55■□□□□ 0.24
TTC39C-209ENST00000584250 GAS8-AS1O95177 125 aa16.55■□□□□ 0.24
TTC39C-209ENST00000584250 NUP35Q8NFH5 326 aa16.55■□□□□ 0.24
TTC39C-209ENST00000584250 CHCHD5Q9BSY4 110 aa16.55■□□□□ 0.24
TTC39C-209ENST00000584250 DNAH5Q8TE73 4624 aa16.55■□□□□ 0.24
TTC39C-209ENST00000584250 A0A1B0GUT8 65 aa16.54■□□□□ 0.24
TTC39C-209ENST00000584250 WFDC2Q14508 124 aa16.54■□□□□ 0.24
TTC39C-209ENST00000584250 MAPKAPK5-AS1Q8N8E1 139 aa16.54■□□□□ 0.24
TTC39C-209ENST00000584250 Q8N976 141 aa16.54■□□□□ 0.24
TTC39C-209ENST00000584250 FAM231BA6NCW3 169 aa16.53■□□□□ 0.24
TTC39C-209ENST00000584250 GAGE6Q13070 117 aa16.53■□□□□ 0.24
TTC39C-209ENST00000584250 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.53■□□□□ 0.24
TTC39C-209ENST00000584250 ATRAIDQ6UW56 229 aa16.52■□□□□ 0.24
TTC39C-209ENST00000584250 SMIM15Q7Z3B0 74 aa16.52■□□□□ 0.24
TTC39C-209ENST00000584250 UBE2WQ96B02 151 aa16.52■□□□□ 0.24
TTC39C-209ENST00000584250 CHCHD7Q9BUK0 85 aa16.52■□□□□ 0.24
TTC39C-209ENST00000584250 TRAV8-3A0A0A6YYJ7 113 aa16.51■□□□□ 0.23
TTC39C-209ENST00000584250 EREGO14944 169 aa16.51■□□□□ 0.23
TTC39C-209ENST00000584250 IQCJQ1A5X6 159 aa16.51■□□□□ 0.23
TTC39C-209ENST00000584250 BORCS7Q96B45 105 aa16.51■□□□□ 0.23
TTC39C-209ENST00000584250 RNF185Q96GF1 192 aa16.51■□□□□ 0.23
TTC39C-209ENST00000584250 TRBV25-1A0A075B6N4 114 aa16.5■□□□□ 0.23
TTC39C-209ENST00000584250 TMEM97Q5BJF2 176 aa16.5■□□□□ 0.23
TTC39C-209ENST00000584250 KRTAP17-1Q9BYP8 105 aa16.5■□□□□ 0.23
TTC39C-209ENST00000584250 RYR1P21817 5038 aa16.49■□□□□ 0.23
TTC39C-209ENST00000584250 IGHV1-24A0A0C4DH33 117 aa16.49■□□□□ 0.23
TTC39C-209ENST00000584250 ENHOQ6UWT2 76 aa16.49■□□□□ 0.23
TTC39C-209ENST00000584250 SMIM27A0A1W2PRY6 76 aa16.48■□□□□ 0.23
TTC39C-209ENST00000584250 LECT2O14960 151 aa16.48■□□□□ 0.23
TTC39C-209ENST00000584250 RBX1P62877 108 aa16.48■□□□□ 0.23
TTC39C-209ENST00000584250 KCNIP4Q6PIL6 250 aa16.48■□□□□ 0.23
TTC39C-209ENST00000584250 TM2D2Q9BX73 214 aa16.48■□□□□ 0.23
TTC39C-209ENST00000584250 TMEM191AQ9H0A3 160 aa16.48■□□□□ 0.23
TTC39C-209ENST00000584250 PGPEP1Q9NXJ5 209 aa16.48■□□□□ 0.23
TTC39C-209ENST00000584250 ANGP03950 147 aaKnown RBP16.47■□□□□ 0.23
TTC39C-209ENST00000584250 AMN1Q8IY45 258 aa16.47■□□□□ 0.23
TTC39C-209ENST00000584250 NAT8BQ9UHF3 227 aa16.47■□□□□ 0.23
TTC39C-209ENST00000584250 IGKV2D-24A0A075B6R9 120 aa16.46■□□□□ 0.23
TTC39C-209ENST00000584250 RAB4AP20338 218 aa16.46■□□□□ 0.23
TTC39C-209ENST00000584250 RPS10P46783 165 aaKnown RBP16.45■□□□□ 0.22
TTC39C-209ENST00000584250 RIGQ13278 110 aa16.45■□□□□ 0.22
TTC39C-209ENST00000584250 ELOBQ15370 118 aa16.45■□□□□ 0.22
TTC39C-209ENST00000584250 CLPSL2Q6UWE3 100 aa16.45■□□□□ 0.22
TTC39C-209ENST00000584250 BAALCQ8WXS3 180 aa16.45■□□□□ 0.22
TTC39C-209ENST00000584250 FRZBQ92765 325 aa16.45■□□□□ 0.22
TTC39C-209ENST00000584250 TMEM243Q9BU79 118 aa16.45■□□□□ 0.22
TTC39C-209ENST00000584250 SMKR1H3BMG3 65 aa16.44■□□□□ 0.22
TTC39C-209ENST00000584250 Q8N814 137 aa16.44■□□□□ 0.22
TTC39C-209ENST00000584250 SDHAF1A6NFY7 115 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms