RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 VSIG2Q96IQ7 327 aa8.46□□□□□ -1.06
CCDC84-209ENST00000580556 PRADC1Q9BSG0 188 aa8.46□□□□□ -1.06
CCDC84-209ENST00000580556 URGCP-MRPS24S4R325 110 aa8.46□□□□□ -1.06
CCDC84-209ENST00000580556 IGLL5B9A064 214 aa8.45□□□□□ -1.06
CCDC84-209ENST00000580556 ATP6V1G1O75348 118 aa8.45□□□□□ -1.06
CCDC84-209ENST00000580556 MGPP08493 103 aa8.45□□□□□ -1.06
CCDC84-209ENST00000580556 CAMPP49913 170 aa8.45□□□□□ -1.06
CCDC84-209ENST00000580556 FAM104BQ5XKR9 115 aa8.45□□□□□ -1.06
CCDC84-209ENST00000580556 SMCO4Q9NRQ5 59 aa8.45□□□□□ -1.06
CCDC84-209ENST00000580556 PKD1P98161 4303 aa8.45□□□□□ -1.06
CCDC84-209ENST00000580556 TRBV24-1A0A075B6N3 115 aa8.44□□□□□ -1.06
CCDC84-209ENST00000580556 A0A1B0GVY2 172 aa8.44□□□□□ -1.06
CCDC84-209ENST00000580556 F5H697 171 aa8.44□□□□□ -1.06
CCDC84-209ENST00000580556 M0QY20 66 aa8.44□□□□□ -1.06
CCDC84-209ENST00000580556 ELOBQ15370 118 aa8.44□□□□□ -1.06
CCDC84-209ENST00000580556 COX19Q49B96 90 aa8.44□□□□□ -1.06
CCDC84-209ENST00000580556 SUMO4Q6EEV6 95 aa8.44□□□□□ -1.06
CCDC84-209ENST00000580556 SH2D6Q7Z4S9 175 aa8.44□□□□□ -1.06
CCDC84-209ENST00000580556 MRAP2Q96G30 205 aa8.44□□□□□ -1.06
CCDC84-209ENST00000580556 YPEL4Q96NS1 127 aa8.44□□□□□ -1.06
CCDC84-209ENST00000580556 ICOSQ9Y6W8 199 aa8.44□□□□□ -1.06
CCDC84-209ENST00000580556 A0A0J9YY99 117 aa8.43□□□□□ -1.06
CCDC84-209ENST00000580556 LINC00694P0DN24 101 aa8.43□□□□□ -1.06
CCDC84-209ENST00000580556 GYPEP15421 78 aa8.43□□□□□ -1.06
CCDC84-209ENST00000580556 RAB4AP20338 218 aa8.43□□□□□ -1.06
CCDC84-209ENST00000580556 MRPL23Q16540 153 aaKnown RBP8.43□□□□□ -1.06
CCDC84-209ENST00000580556 AMN1Q8IY45 258 aa8.43□□□□□ -1.06
CCDC84-209ENST00000580556 RNF185Q96GF1 192 aa8.43□□□□□ -1.06
CCDC84-209ENST00000580556 APLNQ9ULZ1 77 aa8.43□□□□□ -1.06
CCDC84-209ENST00000580556 HERC1Q15751 4861 aa8.43□□□□□ -1.06
CCDC84-209ENST00000580556 DNAJC30Q96LL9 226 aa8.42□□□□□ -1.06
CCDC84-209ENST00000580556 GNB1LQ9BYB4 327 aa8.42□□□□□ -1.06
CCDC84-209ENST00000580556 TRBV7-3A0A075B6L6 115 aa8.41□□□□□ -1.06
CCDC84-209ENST00000580556 A0A096LPF7 62 aa8.41□□□□□ -1.06
CCDC84-209ENST00000580556 PPP1R17O96001 155 aa8.41□□□□□ -1.06
CCDC84-209ENST00000580556 HLA-DQA1P01909 254 aa8.41□□□□□ -1.06
CCDC84-209ENST00000580556 PPBPP02775 128 aa8.41□□□□□ -1.06
CCDC84-209ENST00000580556 MT-ND6P03923 174 aa8.41□□□□□ -1.06
CCDC84-209ENST00000580556 SRIP30626 198 aa8.41□□□□□ -1.06
CCDC84-209ENST00000580556 RPL36AP83881 106 aaKnown RBP8.41□□□□□ -1.06
CCDC84-209ENST00000580556 MRPL51Q4U2R6 128 aaKnown RBP8.41□□□□□ -1.06
CCDC84-209ENST00000580556 TMEM136Q6ZRR5 245 aa8.41□□□□□ -1.06
CCDC84-209ENST00000580556 CBLN2Q8IUK8 224 aa8.41□□□□□ -1.06
CCDC84-209ENST00000580556 NEXN-AS1Q8NBZ9 246 aa8.41□□□□□ -1.06
CCDC84-209ENST00000580556 RPL36ALQ969Q0 106 aaKnown RBP8.41□□□□□ -1.06
CCDC84-209ENST00000580556 TGIF2-C20orf24A0A0A6YYL0 155 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 TRBV6-5A0A0K0K1A5 114 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 LOC100131303A0A0U1RQF7 123 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 NUDT3O95989 172 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 P0DMU3 169 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 FAM231AP0DMU4 169 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 FAM231CP0DMU5 169 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 TIRAPP58753 221 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 UBE2D3P61077 147 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 UBE2D2P62837 147 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 NEGR1Q7Z3B1 354 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 NIT2Q9NQR4 276 aa8.4□□□□□ -1.06
CCDC84-209ENST00000580556 TRAV26-2A0A0B4J265 109 aa8.39□□□□□ -1.07
CCDC84-209ENST00000580556 Q9UF83 564 aa8.39□□□□□ -1.07
CCDC84-209ENST00000580556 GAGE12JA6NER3 117 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 PHOX2AO14813 284 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 CKS2P33552 79 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 GAGE1Q13065 139 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 GAGE4Q13068 117 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 GAGE5Q13069 117 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 GAGE13Q4V321 117 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 DAZ4Q86SG3 579 aaKnown RBP8.38□□□□□ -1.07
CCDC84-209ENST00000580556 ORMDL3Q8N138 153 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 NRACQ8N912 160 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 ZNRF2Q8NHG8 242 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 DAZ3Q9NR90 486 aaKnown RBP8.38□□□□□ -1.07
CCDC84-209ENST00000580556 LAMTOR2Q9Y2Q5 125 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 TNFRSF18Q9Y5U5 241 aa8.38□□□□□ -1.07
CCDC84-209ENST00000580556 APCSP02743 223 aa8.37□□□□□ -1.07
CCDC84-209ENST00000580556 OR10J3Q5JRS4 329 aa8.37□□□□□ -1.07
CCDC84-209ENST00000580556 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.37□□□□□ -1.07
CCDC84-209ENST00000580556 ATP6V0E2Q8NHE4 81 aa8.37□□□□□ -1.07
CCDC84-209ENST00000580556 RPL39LQ96EH5 51 aaKnown RBP8.37□□□□□ -1.07
CCDC84-209ENST00000580556 GTSF1LQ9H1H1 148 aa8.37□□□□□ -1.07
CCDC84-209ENST00000580556 D6R8Y8 96 aa8.36□□□□□ -1.07
CCDC84-209ENST00000580556 GAS8-AS1O95177 125 aa8.36□□□□□ -1.07
CCDC84-209ENST00000580556 NCR2O95944 276 aa8.36□□□□□ -1.07
CCDC84-209ENST00000580556 RPS10P46783 165 aaKnown RBP8.36□□□□□ -1.07
CCDC84-209ENST00000580556 CCL18P55774 89 aa8.36□□□□□ -1.07
CCDC84-209ENST00000580556 RPL32P62910 135 aaKnown RBP8.36□□□□□ -1.07
CCDC84-209ENST00000580556 TMEM97Q5BJF2 176 aa8.36□□□□□ -1.07
CCDC84-209ENST00000580556 LINC00336Q6ZUF6 198 aa8.36□□□□□ -1.07
CCDC84-209ENST00000580556 C20orf78Q9BR46 151 aa8.36□□□□□ -1.07
CCDC84-209ENST00000580556 SDHAF1A6NFY7 115 aa8.35□□□□□ -1.07
CCDC84-209ENST00000580556 COLCA2A8K830 154 aa8.35□□□□□ -1.07
CCDC84-209ENST00000580556 SMKR1H3BMG3 65 aa8.35□□□□□ -1.07
CCDC84-209ENST00000580556 SUMO2P61956 95 aaKnown RBP8.35□□□□□ -1.07
CCDC84-209ENST00000580556 ESRGQ1W209 222 aa8.35□□□□□ -1.07
CCDC84-209ENST00000580556 LYPD5Q6UWN5 251 aa8.35□□□□□ -1.07
CCDC84-209ENST00000580556 PRELID3AQ96N28 172 aa8.35□□□□□ -1.07
CCDC84-209ENST00000580556 UPK3BQ9BT76 320 aa8.35□□□□□ -1.07
CCDC84-209ENST00000580556 TMEM70Q9BUB7 260 aa8.35□□□□□ -1.07
CCDC84-209ENST00000580556 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
CCDC84-209ENST00000580556 ST20Q9HBF5 79 aa8.35□□□□□ -1.07
CCDC84-209ENST00000580556 MRPS16Q9Y3D3 137 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms