RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 SRP19P09132 144 aaKnown RBP2.57□□□□□ -2
NUP85-209ENST00000578987 AKR1C3P42330 323 aa2.57□□□□□ -2
NUP85-209ENST00000578987 CRIP1P50238 77 aa2.57□□□□□ -2
NUP85-209ENST00000578987 HERV-K104P63124 156 aa2.57□□□□□ -2
NUP85-209ENST00000578987 SLAQ13239 276 aa2.57□□□□□ -2
NUP85-209ENST00000578987 LINC01620Q4KN68 170 aa2.57□□□□□ -2
NUP85-209ENST00000578987 FAM74A3Q4VXF1 159 aa2.57□□□□□ -2
NUP85-209ENST00000578987 FAM162BQ5T6X4 162 aa2.57□□□□□ -2
NUP85-209ENST00000578987 UQCC3Q6UW78 93 aa2.57□□□□□ -2
NUP85-209ENST00000578987 Q6ZSN1 163 aa2.57□□□□□ -2
NUP85-209ENST00000578987 Q8N3U1 123 aa2.57□□□□□ -2
NUP85-209ENST00000578987 PCNPQ8WW12 178 aaKnown RBP2.57□□□□□ -2
NUP85-209ENST00000578987 RASL10AQ92737 203 aa2.57□□□□□ -2
NUP85-209ENST00000578987 TRBV20OR9-2A0A075B6H5 130 aa2.56□□□□□ -2
NUP85-209ENST00000578987 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.56□□□□□ -2
NUP85-209ENST00000578987 TRAV4A0A0B4J268 109 aa2.56□□□□□ -2
NUP85-209ENST00000578987 IGKV3D-20A0A0C4DH25 116 aa2.56□□□□□ -2
NUP85-209ENST00000578987 IGHV3-38A0A0C4DH36 116 aa2.56□□□□□ -2
NUP85-209ENST00000578987 LINC00862A6NCI5 91 aa2.56□□□□□ -2
NUP85-209ENST00000578987 C19orf71A6NCJ1 209 aa2.56□□□□□ -2
NUP85-209ENST00000578987 C9JQL5 133 aa2.56□□□□□ -2
NUP85-209ENST00000578987 M0R2P5 195 aa2.56□□□□□ -2
NUP85-209ENST00000578987 GCGP01275 180 aa2.56□□□□□ -2
NUP85-209ENST00000578987 IGLV2-8P01709 118 aa2.56□□□□□ -2
NUP85-209ENST00000578987 TYMSP04818 313 aa2.56□□□□□ -2
NUP85-209ENST00000578987 GNG4P50150 75 aa2.56□□□□□ -2
NUP85-209ENST00000578987 ZNF80P51504 273 aaPredicted RBP2.56□□□□□ -2
NUP85-209ENST00000578987 SEC61GP60059 68 aa2.56□□□□□ -2
NUP85-209ENST00000578987 PNRC1Q12796 327 aaPredicted RBP2.56□□□□□ -2
NUP85-209ENST00000578987 WFDC2Q14508 124 aa2.56□□□□□ -2
NUP85-209ENST00000578987 TMEM241Q24JQ0 296 aa2.56□□□□□ -2
NUP85-209ENST00000578987 PIK3CD-AS1Q5SR53 167 aa2.56□□□□□ -2
NUP85-209ENST00000578987 DNLZQ5SXM8 178 aa2.56□□□□□ -2
NUP85-209ENST00000578987 Q86TA4 180 aa2.56□□□□□ -2
NUP85-209ENST00000578987 Q8N814 137 aa2.56□□□□□ -2
NUP85-209ENST00000578987 PTH2Q96A98 100 aa2.56□□□□□ -2
NUP85-209ENST00000578987 DNAJC30Q96LL9 226 aa2.56□□□□□ -2
NUP85-209ENST00000578987 DERL1Q9BUN8 251 aa2.56□□□□□ -2
NUP85-209ENST00000578987 PARLQ9H300 379 aa2.56□□□□□ -2
NUP85-209ENST00000578987 SDF2L1Q9HCN8 221 aa2.56□□□□□ -2
NUP85-209ENST00000578987 C11orf21Q9P2W6 132 aa2.56□□□□□ -2
NUP85-209ENST00000578987 Q9UF83 564 aa2.56□□□□□ -2
NUP85-209ENST00000578987 TRAV8-6A0A0B4J262 113 aa2.55□□□□□ -2
NUP85-209ENST00000578987 TMEM218A2RU14 115 aa2.55□□□□□ -2
NUP85-209ENST00000578987 FAM231BA6NCW3 169 aa2.55□□□□□ -2
NUP85-209ENST00000578987 ZNF727A8MUV8 499 aa2.55□□□□□ -2
NUP85-209ENST00000578987 IBA57-AS1B1ANH7 110 aa2.55□□□□□ -2
NUP85-209ENST00000578987 B4DEV8 164 aa2.55□□□□□ -2
NUP85-209ENST00000578987 KRBOX1C9JBD0 128 aa2.55□□□□□ -2
NUP85-209ENST00000578987 RS1O15537 224 aa2.55□□□□□ -2
NUP85-209ENST00000578987 SH2D1AO60880 128 aa2.55□□□□□ -2
NUP85-209ENST00000578987 ORM1P02763 201 aa2.55□□□□□ -2
NUP85-209ENST00000578987 CXCL1P09341 107 aa2.55□□□□□ -2
NUP85-209ENST00000578987 GATA1P15976 413 aaPredicted RBP2.55□□□□□ -2
NUP85-209ENST00000578987 FOXA3P55318 350 aaPredicted RBP2.55□□□□□ -2
NUP85-209ENST00000578987 RPS20P60866 119 aaKnown RBP2.55□□□□□ -2
NUP85-209ENST00000578987 ZNF876PQ49A33 203 aa2.55□□□□□ -2
NUP85-209ENST00000578987 CENPWQ5EE01 88 aa2.55□□□□□ -2
NUP85-209ENST00000578987 C6orf226Q5I0X4 101 aa2.55□□□□□ -2
NUP85-209ENST00000578987 OR10J3Q5JRS4 329 aa2.55□□□□□ -2
NUP85-209ENST00000578987 CFAP126Q5VTH2 177 aa2.55□□□□□ -2
NUP85-209ENST00000578987 FAM231DQ6ZW35 169 aa2.55□□□□□ -2
NUP85-209ENST00000578987 DAZ4Q86SG3 579 aaKnown RBP2.55□□□□□ -2
NUP85-209ENST00000578987 LINC01551Q86U37 167 aa2.55□□□□□ -2
NUP85-209ENST00000578987 SLC7A5P1Q8MH63 180 aa2.55□□□□□ -2
NUP85-209ENST00000578987 SLC25A29Q8N8R3 303 aa2.55□□□□□ -2
NUP85-209ENST00000578987 ATP6V0E2Q8NHE4 81 aa2.55□□□□□ -2
NUP85-209ENST00000578987 BAALCQ8WXS3 180 aa2.55□□□□□ -2
NUP85-209ENST00000578987 ZC2HC1AQ96GY0 325 aa2.55□□□□□ -2
NUP85-209ENST00000578987 SMIM7Q9BQ49 75 aa2.55□□□□□ -2
NUP85-209ENST00000578987 SAMD10Q9BYL1 202 aa2.55□□□□□ -2
NUP85-209ENST00000578987 KRTAP4-7Q9BYR0 210 aa2.55□□□□□ -2
NUP85-209ENST00000578987 JPT2Q9H910 190 aa2.55□□□□□ -2
NUP85-209ENST00000578987 DAZ3Q9NR90 486 aaKnown RBP2.55□□□□□ -2
NUP85-209ENST00000578987 IL36BQ9NZH7 164 aa2.55□□□□□ -2
NUP85-209ENST00000578987 NAT8Q9UHE5 227 aa2.55□□□□□ -2
NUP85-209ENST00000578987 DYNC1H1Q14204 4646 aaKnown RBP2.55□□□□□ -2
NUP85-209ENST00000578987 DNAH11Q96DT5 4516 aa2.54□□□□□ -2
NUP85-209ENST00000578987 GAGE12JA6NER3 117 aa2.54□□□□□ -2
NUP85-209ENST00000578987 A8MWL6 223 aa2.54□□□□□ -2
NUP85-209ENST00000578987 F2Z2F3 143 aa2.54□□□□□ -2
NUP85-209ENST00000578987 K7EN84 100 aa2.54□□□□□ -2
NUP85-209ENST00000578987 P01737 135 aa2.54□□□□□ -2
NUP85-209ENST00000578987 OR5AL1P0C617 328 aa2.54□□□□□ -2
NUP85-209ENST00000578987 ARMS2P0C7Q2 107 aa2.54□□□□□ -2
NUP85-209ENST00000578987 MGST1P10620 155 aaKnown RBP2.54□□□□□ -2
NUP85-209ENST00000578987 RNASE3P12724 160 aaKnown RBP2.54□□□□□ -2
NUP85-209ENST00000578987 S100A4P26447 101 aaKnown RBP2.54□□□□□ -2
NUP85-209ENST00000578987 ASIPP42127 132 aa2.54□□□□□ -2
NUP85-209ENST00000578987 CEBPGP53567 150 aa2.54□□□□□ -2
NUP85-209ENST00000578987 GAGE1Q13065 139 aa2.54□□□□□ -2
NUP85-209ENST00000578987 GAGE4Q13068 117 aa2.54□□□□□ -2
NUP85-209ENST00000578987 GAGE5Q13069 117 aa2.54□□□□□ -2
NUP85-209ENST00000578987 NDUFA5Q16718 116 aa2.54□□□□□ -2
NUP85-209ENST00000578987 LINC01556Q5JQF7 62 aa2.54□□□□□ -2
NUP85-209ENST00000578987 RNASEKQ6P5S7 137 aaKnown RBP2.54□□□□□ -2
NUP85-209ENST00000578987 C10orf126Q8N4M7 172 aa2.54□□□□□ -2
NUP85-209ENST00000578987 C14orf178Q8N769 122 aaPredicted RBP2.54□□□□□ -2
NUP85-209ENST00000578987 OR2D3Q8NGH3 330 aa2.54□□□□□ -2
NUP85-209ENST00000578987 TMEM18Q96B42 140 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms