RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
MKS1-207ENST00000578789 PKHD1P08F94 4074 aa9.75□□□□□ -0.85
MKS1-207ENST00000578789 IBA57-AS1B1ANH7 110 aa9.74□□□□□ -0.85
MKS1-207ENST00000578789 M0QY20 66 aa9.74□□□□□ -0.85
MKS1-207ENST00000578789 IGHV3-30P01768 117 aa9.74□□□□□ -0.85
MKS1-207ENST00000578789 IGHV3-33P01772 117 aa9.74□□□□□ -0.85
MKS1-207ENST00000578789 MGPP08493 103 aa9.74□□□□□ -0.85
MKS1-207ENST00000578789 IGHV3-30-3P0DP02 117 aa9.74□□□□□ -0.85
MKS1-207ENST00000578789 IGHV3-30-5P0DP03 117 aa9.74□□□□□ -0.85
MKS1-207ENST00000578789 FOXA3P55318 350 aaPredicted RBP9.74□□□□□ -0.85
MKS1-207ENST00000578789 LAGE3Q14657 143 aa9.74□□□□□ -0.85
MKS1-207ENST00000578789 SUMO4Q6EEV6 95 aa9.74□□□□□ -0.85
MKS1-207ENST00000578789 H7C1H1 209 aa9.73□□□□□ -0.85
MKS1-207ENST00000578789 RPL23P62829 140 aaKnown RBP9.73□□□□□ -0.85
MKS1-207ENST00000578789 TMEM241Q24JQ0 296 aa9.73□□□□□ -0.85
MKS1-207ENST00000578789 TSKUQ8WUA8 353 aa9.73□□□□□ -0.85
MKS1-207ENST00000578789 ISOC2Q96AB3 205 aa9.73□□□□□ -0.85
MKS1-207ENST00000578789 KRTAP17-1Q9BYP8 105 aa9.73□□□□□ -0.85
MKS1-207ENST00000578789 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
MKS1-207ENST00000578789 FAM231BA6NCW3 169 aa9.72□□□□□ -0.85
MKS1-207ENST00000578789 TWIST1Q15672 202 aa9.72□□□□□ -0.85
MKS1-207ENST00000578789 DAZ4Q86SG3 579 aaKnown RBP9.72□□□□□ -0.85
MKS1-207ENST00000578789 NIT1Q86X76 327 aa9.72□□□□□ -0.85
MKS1-207ENST00000578789 Q8N3U1 123 aa9.72□□□□□ -0.85
MKS1-207ENST00000578789 DNAJC30Q96LL9 226 aa9.72□□□□□ -0.85
MKS1-207ENST00000578789 DAZ3Q9NR90 486 aaKnown RBP9.72□□□□□ -0.85
MKS1-207ENST00000578789 NAT8Q9UHE5 227 aa9.72□□□□□ -0.85
MKS1-207ENST00000578789 TRBV6-8A0A0A6YYG3 113 aa9.71□□□□□ -0.86
MKS1-207ENST00000578789 TMEM97Q5BJF2 176 aa9.71□□□□□ -0.86
MKS1-207ENST00000578789 C15orf54Q8N8G6 183 aa9.71□□□□□ -0.86
MKS1-207ENST00000578789 PGLYRP4Q96LB8 373 aa9.71□□□□□ -0.86
MKS1-207ENST00000578789 CHCHD7Q9BUK0 85 aa9.71□□□□□ -0.86
MKS1-207ENST00000578789 V9GYV3 84 aa9.71□□□□□ -0.86
MKS1-207ENST00000578789 KIAA1109Q2LD37 5005 aa9.7□□□□□ -0.86
MKS1-207ENST00000578789 RASL11AQ6T310 242 aa9.7□□□□□ -0.86
MKS1-207ENST00000578789 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.7□□□□□ -0.86
MKS1-207ENST00000578789 HIGD1CA8MV81 97 aa9.69□□□□□ -0.86
MKS1-207ENST00000578789 ADIRFQ15847 76 aa9.69□□□□□ -0.86
MKS1-207ENST00000578789 SPATA12Q7Z6I5 190 aa9.69□□□□□ -0.86
MKS1-207ENST00000578789 BORCS7Q96B45 105 aa9.69□□□□□ -0.86
MKS1-207ENST00000578789 HERC2O95714 4834 aa9.68□□□□□ -0.86
MKS1-207ENST00000578789 RAB14P61106 215 aa9.68□□□□□ -0.86
MKS1-207ENST00000578789 NTM-AS1Q6ZSK4 140 aa9.68□□□□□ -0.86
MKS1-207ENST00000578789 SMIM15Q7Z3B0 74 aa9.68□□□□□ -0.86
MKS1-207ENST00000578789 FRZBQ92765 325 aa9.68□□□□□ -0.86
MKS1-207ENST00000578789 NIT2Q9NQR4 276 aa9.68□□□□□ -0.86
MKS1-207ENST00000578789 URGCP-MRPS24S4R325 110 aa9.68□□□□□ -0.86
MKS1-207ENST00000578789 A0A087WTM6 91 aa9.67□□□□□ -0.86
MKS1-207ENST00000578789 A0A1B0GUT8 65 aa9.67□□□□□ -0.86
MKS1-207ENST00000578789 C16orf90A8MZG2 172 aa9.67□□□□□ -0.86
MKS1-207ENST00000578789 KRTAP10-2P60368 255 aa9.67□□□□□ -0.86
MKS1-207ENST00000578789 CLLU1Q5K131 121 aa9.67□□□□□ -0.86
MKS1-207ENST00000578789 GATD1Q8NB37 220 aa9.67□□□□□ -0.86
MKS1-207ENST00000578789 Q9HAA7 133 aa9.67□□□□□ -0.86
MKS1-207ENST00000578789 A0A087WX48 190 aa9.66□□□□□ -0.86
MKS1-207ENST00000578789 TRAV8-3A0A0A6YYJ7 113 aa9.66□□□□□ -0.86
MKS1-207ENST00000578789 EREGO14944 169 aa9.66□□□□□ -0.86
MKS1-207ENST00000578789 PKIAP61925 76 aa9.66□□□□□ -0.86
MKS1-207ENST00000578789 IQCJQ1A5X6 159 aa9.66□□□□□ -0.86
MKS1-207ENST00000578789 TRBV25-1A0A075B6N4 114 aa9.65□□□□□ -0.86
MKS1-207ENST00000578789 TRAV26-2A0A0B4J265 109 aa9.65□□□□□ -0.86
MKS1-207ENST00000578789 IFITM2Q01629 132 aa9.65□□□□□ -0.86
MKS1-207ENST00000578789 ELOBQ15370 118 aa9.65□□□□□ -0.86
MKS1-207ENST00000578789 KCNIP4Q6PIL6 250 aa9.65□□□□□ -0.86
MKS1-207ENST00000578789 NUP35Q8NFH5 326 aa9.65□□□□□ -0.86
MKS1-207ENST00000578789 TMEM191AQ9H0A3 160 aa9.65□□□□□ -0.86
MKS1-207ENST00000578789 NAT8BQ9UHF3 227 aa9.65□□□□□ -0.86
MKS1-207ENST00000578789 DNAH5Q8TE73 4624 aa9.65□□□□□ -0.86
MKS1-207ENST00000578789 LRP1BQ9NZR2 4599 aa9.64□□□□□ -0.87
MKS1-207ENST00000578789 IGHV1-24A0A0C4DH33 117 aa9.64□□□□□ -0.87
MKS1-207ENST00000578789 SMIM27A0A1W2PRY6 76 aa9.64□□□□□ -0.87
MKS1-207ENST00000578789 LRCOL1A6NCL2 159 aa9.64□□□□□ -0.87
MKS1-207ENST00000578789 PSCAO43653 123 aa9.64□□□□□ -0.87
MKS1-207ENST00000578789 MPV17L2Q567V2 206 aa9.64□□□□□ -0.87
MKS1-207ENST00000578789 CDPF1Q6NVV7 123 aa9.64□□□□□ -0.87
MKS1-207ENST00000578789 CHCHD5Q9BSY4 110 aa9.64□□□□□ -0.87
MKS1-207ENST00000578789 TM2D2Q9BX73 214 aa9.64□□□□□ -0.87
MKS1-207ENST00000578789 KLK12Q9UKR0 248 aa9.64□□□□□ -0.87
MKS1-207ENST00000578789 SMCPP49901 116 aaPredicted RBP9.63□□□□□ -0.87
MKS1-207ENST00000578789 RIGQ13278 110 aa9.63□□□□□ -0.87
MKS1-207ENST00000578789 ATRAIDQ6UW56 229 aa9.63□□□□□ -0.87
MKS1-207ENST00000578789 RPL39LQ96EH5 51 aaKnown RBP9.63□□□□□ -0.87
MKS1-207ENST00000578789 RYR1P21817 5038 aa9.63□□□□□ -0.87
MKS1-207ENST00000578789 TMEM262E9PQX1 116 aa9.62□□□□□ -0.87
MKS1-207ENST00000578789 J3QL48 77 aa9.62□□□□□ -0.87
MKS1-207ENST00000578789 RMI2Q96E14 147 aa9.62□□□□□ -0.87
MKS1-207ENST00000578789 RNF185Q96GF1 192 aa9.62□□□□□ -0.87
MKS1-207ENST00000578789 PGPEP1Q9NXJ5 209 aa9.62□□□□□ -0.87
MKS1-207ENST00000578789 COX11Q9Y6N1 276 aa9.62□□□□□ -0.87
MKS1-207ENST00000578789 TRBV6-5A0A0K0K1A5 114 aa9.61□□□□□ -0.87
MKS1-207ENST00000578789 Q0VG73 95 aa9.61□□□□□ -0.87
MKS1-207ENST00000578789 COTL1Q14019 142 aa9.61□□□□□ -0.87
MKS1-207ENST00000578789 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
MKS1-207ENST00000578789 RAB4AP20338 218 aa9.6□□□□□ -0.87
MKS1-207ENST00000578789 RBX1P62877 108 aa9.6□□□□□ -0.87
MKS1-207ENST00000578789 PNRC1Q12796 327 aaPredicted RBP9.6□□□□□ -0.87
MKS1-207ENST00000578789 GAGE6Q13070 117 aa9.6□□□□□ -0.87
MKS1-207ENST00000578789 AMN1Q8IY45 258 aa9.6□□□□□ -0.87
MKS1-207ENST00000578789 Q8N976 141 aa9.6□□□□□ -0.87
MKS1-207ENST00000578789 UBE2WQ96B02 151 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms