RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 MT-ATP8P03928 68 aa10.29□□□□□ -0.76
NDEL1-204ENST00000578172 C9orf47Q6ZRZ4 202 aa10.29□□□□□ -0.76
NDEL1-204ENST00000578172 ZNF48Q96MX3 618 aaPredicted RBP10.29□□□□□ -0.76
NDEL1-204ENST00000578172 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
NDEL1-204ENST00000578172 SIVA1O15304 175 aa10.29□□□□□ -0.76
NDEL1-204ENST00000578172 PROK1P58294 105 aa10.29□□□□□ -0.76
NDEL1-204ENST00000578172 MUC4Q99102 2169 aa10.28□□□□□ -0.76
NDEL1-204ENST00000578172 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
NDEL1-204ENST00000578172 PIFOQ8TCI5 191 aa10.28□□□□□ -0.76
NDEL1-204ENST00000578172 ZNF625Q96I27 306 aaPredicted RBP10.28□□□□□ -0.76
NDEL1-204ENST00000578172 FLNAP21333 2647 aaKnown RBP10.28□□□□□ -0.76
NDEL1-204ENST00000578172 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
NDEL1-204ENST00000578172 C18orf65Q6ZTR6 163 aa10.28□□□□□ -0.76
NDEL1-204ENST00000578172 BAALCQ8WXS3 180 aa10.28□□□□□ -0.76
NDEL1-204ENST00000578172 TRAV8-4A0A0B4J246 113 aa10.28□□□□□ -0.76
NDEL1-204ENST00000578172 ZFP2Q6ZN57 461 aa10.28□□□□□ -0.76
NDEL1-204ENST00000578172 RNF183Q96D59 192 aa10.28□□□□□ -0.76
NDEL1-204ENST00000578172 DYNLRB2Q8TF09 96 aa10.27□□□□□ -0.76
NDEL1-204ENST00000578172 SLURP1P55000 103 aa10.27□□□□□ -0.77
NDEL1-204ENST00000578172 GPHB5Q86YW7 130 aa10.27□□□□□ -0.77
NDEL1-204ENST00000578172 APRG1Q8IVJ8 170 aa10.27□□□□□ -0.77
NDEL1-204ENST00000578172 Q8N1Y9 231 aa10.27□□□□□ -0.77
NDEL1-204ENST00000578172 PPDPFLQ8WWR9 84 aa10.27□□□□□ -0.77
NDEL1-204ENST00000578172 TMEM262E9PQX1 116 aa10.27□□□□□ -0.77
NDEL1-204ENST00000578172 ZNF575Q86XF7 245 aa10.27□□□□□ -0.77
NDEL1-204ENST00000578172 NTN5Q8WTR8 489 aaPredicted RBP10.27□□□□□ -0.77
NDEL1-204ENST00000578172 TMEM190Q8WZ59 177 aa10.27□□□□□ -0.77
NDEL1-204ENST00000578172 RNASE1P07998 156 aaKnown RBP10.26□□□□□ -0.77
NDEL1-204ENST00000578172 RNASE3P12724 160 aaKnown RBP10.26□□□□□ -0.77
NDEL1-204ENST00000578172 SPANXB1Q9NS25 103 aaPredicted RBP10.26□□□□□ -0.77
NDEL1-204ENST00000578172 RBAKDNA6NC62 111 aa10.26□□□□□ -0.77
NDEL1-204ENST00000578172 B4DSR2 109 aa10.26□□□□□ -0.77
NDEL1-204ENST00000578172 RS1O15537 224 aa10.26□□□□□ -0.77
NDEL1-204ENST00000578172 C10orf105Q8TEF2 133 aa10.26□□□□□ -0.77
NDEL1-204ENST00000578172 TRAV8-3A0A0A6YYJ7 113 aa10.25□□□□□ -0.77
NDEL1-204ENST00000578172 FOXI1Q12951 378 aa10.25□□□□□ -0.77
NDEL1-204ENST00000578172 C2orf82Q6UX34 121 aa10.25□□□□□ -0.77
NDEL1-204ENST00000578172 VCX2Q9H322 139 aa10.25□□□□□ -0.77
NDEL1-204ENST00000578172 HECTD1Q9ULT8 2610 aa10.25□□□□□ -0.77
NDEL1-204ENST00000578172 HIST2H2BCQ6DN03 193 aa10.25□□□□□ -0.77
NDEL1-204ENST00000578172 LINC01587Q99440 93 aa10.25□□□□□ -0.77
NDEL1-204ENST00000578172 IGHV4OR15-8A0A075B7B6 117 aa10.25□□□□□ -0.77
NDEL1-204ENST00000578172 A0A087WW49 117 aa10.25□□□□□ -0.77
NDEL1-204ENST00000578172 USMG5Q96IX5 58 aa10.25□□□□□ -0.77
NDEL1-204ENST00000578172 C1QTNF4Q9BXJ3 329 aa10.25□□□□□ -0.77
NDEL1-204ENST00000578172 TCTEX1D4Q5JR98 221 aa10.24□□□□□ -0.77
NDEL1-204ENST00000578172 XCL2Q9UBD3 114 aa10.24□□□□□ -0.77
NDEL1-204ENST00000578172 SLC25A20O43772 301 aa10.24□□□□□ -0.77
NDEL1-204ENST00000578172 MEIG1Q5JSS6 88 aa10.24□□□□□ -0.77
NDEL1-204ENST00000578172 NBEAL2Q6ZNJ1 2754 aa10.24□□□□□ -0.77
NDEL1-204ENST00000578172 LGALS1P09382 135 aaKnown RBP10.24□□□□□ -0.77
NDEL1-204ENST00000578172 CFHR3Q02985 330 aa10.24□□□□□ -0.77
NDEL1-204ENST00000578172 ZNF580Q9UK33 172 aa10.24□□□□□ -0.77
NDEL1-204ENST00000578172 A0A0J9YXV3 536 aa10.23□□□□□ -0.77
NDEL1-204ENST00000578172 A8MZ25 164 aa10.23□□□□□ -0.77
NDEL1-204ENST00000578172 IGHG2P01859 326 aa10.23□□□□□ -0.77
NDEL1-204ENST00000578172 UFSP1Q6NVU6 142 aa10.23□□□□□ -0.77
NDEL1-204ENST00000578172 CD28P10747 220 aa10.23□□□□□ -0.77
NDEL1-204ENST00000578172 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
NDEL1-204ENST00000578172 VCYO14598 125 aa10.22□□□□□ -0.77
NDEL1-204ENST00000578172 HOXD3P31249 432 aaPredicted RBP10.22□□□□□ -0.77
NDEL1-204ENST00000578172 DAND5Q8N907 189 aa10.22□□□□□ -0.77
NDEL1-204ENST00000578172 TNFRSF18Q9Y5U5 241 aa10.22□□□□□ -0.77
NDEL1-204ENST00000578172 ITPR3Q14573 2671 aa10.22□□□□□ -0.77
NDEL1-204ENST00000578172 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.21□□□□□ -0.77
NDEL1-204ENST00000578172 IGKV2-29A2NJV5 120 aaPredicted RBP10.21□□□□□ -0.77
NDEL1-204ENST00000578172 MXRA5Q9NR99 2828 aa10.21□□□□□ -0.78
NDEL1-204ENST00000578172 GAGE5Q13069 117 aa10.21□□□□□ -0.78
NDEL1-204ENST00000578172 GAGE6Q13070 117 aa10.21□□□□□ -0.78
NDEL1-204ENST00000578172 TRPT1Q86TN4 253 aaKnown RBP10.21□□□□□ -0.78
NDEL1-204ENST00000578172 Q9UF83 564 aa10.21□□□□□ -0.78
NDEL1-204ENST00000578172 PRO1854Q9UHT4 67 aa10.21□□□□□ -0.78
NDEL1-204ENST00000578172 A6NDX4 124 aa10.2□□□□□ -0.78
NDEL1-204ENST00000578172 COX6B1P14854 86 aa10.2□□□□□ -0.78
NDEL1-204ENST00000578172 CNFNQ9BYD5 112 aa10.2□□□□□ -0.78
NDEL1-204ENST00000578172 IGHV1OR15-1A0A075B7D0 117 aa10.2□□□□□ -0.78
NDEL1-204ENST00000578172 ANKRD29Q8N6D5 301 aa10.2□□□□□ -0.78
NDEL1-204ENST00000578172 TOMM6Q96B49 74 aa10.2□□□□□ -0.78
NDEL1-204ENST00000578172 SCGB1A1P11684 91 aa10.19□□□□□ -0.78
NDEL1-204ENST00000578172 PMVKQ15126 192 aa10.19□□□□□ -0.78
NDEL1-204ENST00000578172 E9PLD3 99 aa10.19□□□□□ -0.78
NDEL1-204ENST00000578172 C15orf53Q8NAA6 179 aa10.19□□□□□ -0.78
NDEL1-204ENST00000578172 GAGE12JA6NER3 117 aa10.19□□□□□ -0.78
NDEL1-204ENST00000578172 GAGE7O76087 117 aa10.19□□□□□ -0.78
NDEL1-204ENST00000578172 GAGE12FP0CL80 117 aa10.19□□□□□ -0.78
NDEL1-204ENST00000578172 GAGE12GP0CL81 117 aa10.19□□□□□ -0.78
NDEL1-204ENST00000578172 GAGE12IP0CL82 117 aa10.19□□□□□ -0.78
NDEL1-204ENST00000578172 GAGE4Q13068 117 aa10.19□□□□□ -0.78
NDEL1-204ENST00000578172 NEXN-AS1Q8NBZ9 246 aa10.18□□□□□ -0.78
NDEL1-204ENST00000578172 TOMM7Q9P0U1 55 aa10.18□□□□□ -0.78
NDEL1-204ENST00000578172 Q6ZUT4 128 aa10.18□□□□□ -0.78
NDEL1-204ENST00000578172 U3KQE9 123 aa10.18□□□□□ -0.78
NDEL1-204ENST00000578172 M0R2P5 195 aa10.18□□□□□ -0.78
NDEL1-204ENST00000578172 KRTAP10-9P60411 292 aa10.18□□□□□ -0.78
NDEL1-204ENST00000578172 IFITM1P13164 125 aa10.17□□□□□ -0.78
NDEL1-204ENST00000578172 PAPPA-AS1Q5QFB9 102 aa10.17□□□□□ -0.78
NDEL1-204ENST00000578172 TEN1Q86WV5 123 aa10.17□□□□□ -0.78
NDEL1-204ENST00000578172 USP24Q9UPU5 2620 aa10.17□□□□□ -0.78
NDEL1-204ENST00000578172 A4D1N5 150 aa10.17□□□□□ -0.78
NDEL1-204ENST00000578172 J3QQQ9 107 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms