RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 HIST1H2BLQ99880 126 aa7.53□□□□□ -1.2
SMARCE1-214ENST00000578112 Q6ZSA8 131 aa7.52□□□□□ -1.21
SMARCE1-214ENST00000578112 OR5C1Q8NGR4 320 aa7.52□□□□□ -1.21
SMARCE1-214ENST00000578112 HSPB8Q9UJY1 196 aa7.52□□□□□ -1.21
SMARCE1-214ENST00000578112 UBE2L3P68036 154 aaKnown RBP7.52□□□□□ -1.21
SMARCE1-214ENST00000578112 LYPD6BQ8NI32 183 aa7.52□□□□□ -1.21
SMARCE1-214ENST00000578112 NAT8Q9UHE5 227 aa7.52□□□□□ -1.21
SMARCE1-214ENST00000578112 HMSDA8MTL9 139 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 J3QL48 77 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 PQLC2Q6ZP29 291 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 CMTM2Q8TAZ6 248 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 DEFB104AQ8WTQ1 72 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 PPDPFQ9H3Y8 114 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 OR5AC2Q9NZP5 309 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 TRAV8-3A0A0A6YYJ7 113 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 GIPP09681 153 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 MUC21Q5SSG8 566 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 Q8TAT8 98 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 RMI2Q96E14 147 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 NDFIP1Q9BT67 221 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 PSMG3Q9BT73 122 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 ERG28Q9UKR5 140 aa7.51□□□□□ -1.21
SMARCE1-214ENST00000578112 G3V3Q6 166 aa7.5□□□□□ -1.21
SMARCE1-214ENST00000578112 SFTA3P0C7M3 94 aa7.5□□□□□ -1.21
SMARCE1-214ENST00000578112 C6orf226Q5I0X4 101 aa7.5□□□□□ -1.21
SMARCE1-214ENST00000578112 OR10G9Q8NGN4 311 aa7.5□□□□□ -1.21
SMARCE1-214ENST00000578112 OR2T35Q8NGX2 323 aa7.5□□□□□ -1.21
SMARCE1-214ENST00000578112 A0A0D9SG52 128 aa7.49□□□□□ -1.21
SMARCE1-214ENST00000578112 TYMSP04818 313 aa7.49□□□□□ -1.21
SMARCE1-214ENST00000578112 MGST1P10620 155 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-214ENST00000578112 SERTAD4-AS1Q5TG53 156 aa7.49□□□□□ -1.21
SMARCE1-214ENST00000578112 GTSF1LQ9H1H1 148 aa7.49□□□□□ -1.21
SMARCE1-214ENST00000578112 BATFQ16520 125 aa7.49□□□□□ -1.21
SMARCE1-214ENST00000578112 ZFP2Q6ZN57 461 aa7.49□□□□□ -1.21
SMARCE1-214ENST00000578112 A0A087WWC5 75 aa7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 A0A087WX48 190 aa7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 OXTP01178 125 aa7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 OR10J3Q5JRS4 329 aa7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 SCGB1C1Q8TD33 95 aa7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 TAAR5O14804 337 aa7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 SMR3BP02814 79 aaPredicted RBP7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 ACOT6Q3I5F7 207 aaPredicted RBP7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 Q6ZQT7 251 aa7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 FA2HQ7L5A8 372 aa7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 FER1L6-AS1Q8NA97 138 aa7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 C9orf85Q96MD7 179 aa7.48□□□□□ -1.21
SMARCE1-214ENST00000578112 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 FFAR4Q5NUL3 377 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 SYT8Q8NBV8 401 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 CHCHD7Q9BUK0 85 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 LINC00694P0DN24 101 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 CFAP126Q5VTH2 177 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 STPG4Q8N801 248 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 ATP6V0E2Q8NHE4 81 aa7.47□□□□□ -1.21
SMARCE1-214ENST00000578112 PGPA6NDG6 321 aa7.46□□□□□ -1.21
SMARCE1-214ENST00000578112 FUSP35637 526 aaKnown RBP eCLIP7.46□□□□□ -1.21
SMARCE1-214ENST00000578112 AMTP48728 403 aa7.46□□□□□ -1.21
SMARCE1-214ENST00000578112 SLC25A29Q8N8R3 303 aa7.46□□□□□ -1.21
SMARCE1-214ENST00000578112 A8MWV9 139 aa7.46□□□□□ -1.22
SMARCE1-214ENST00000578112 LINC00528Q8N1L1 170 aa7.46□□□□□ -1.22
SMARCE1-214ENST00000578112 Q8N976 141 aa7.46□□□□□ -1.22
SMARCE1-214ENST00000578112 RPS10P5Q9NQ39 176 aa7.46□□□□□ -1.22
SMARCE1-214ENST00000578112 VAX2Q9UIW0 290 aa7.46□□□□□ -1.22
SMARCE1-214ENST00000578112 V9GYY9 64 aa7.46□□□□□ -1.22
SMARCE1-214ENST00000578112 B5MCH6 92 aa7.45□□□□□ -1.22
SMARCE1-214ENST00000578112 GGTLC3B5MD39 225 aa7.45□□□□□ -1.22
SMARCE1-214ENST00000578112 GNRH2O43555 120 aa7.45□□□□□ -1.22
SMARCE1-214ENST00000578112 ELOBQ15370 118 aa7.45□□□□□ -1.22
SMARCE1-214ENST00000578112 ZNF876PQ49A33 203 aa7.45□□□□□ -1.22
SMARCE1-214ENST00000578112 C5orf17Q8NAS9 161 aa7.45□□□□□ -1.22
SMARCE1-214ENST00000578112 TRAV8-1A0A0A6YYK1 113 aa7.45□□□□□ -1.22
SMARCE1-214ENST00000578112 LOC100131303A0A0U1RQF7 123 aa7.45□□□□□ -1.22
SMARCE1-214ENST00000578112 CAMPP49913 170 aa7.45□□□□□ -1.22
SMARCE1-214ENST00000578112 CT83Q5H943 113 aa7.45□□□□□ -1.22
SMARCE1-214ENST00000578112 A0A1W2PRE2 83 aa7.44□□□□□ -1.22
SMARCE1-214ENST00000578112 RPS10P46783 165 aaKnown RBP7.44□□□□□ -1.22
SMARCE1-214ENST00000578112 C14orf177Q52M58 125 aa7.44□□□□□ -1.22
SMARCE1-214ENST00000578112 GOLT1AQ6ZVE7 132 aa7.44□□□□□ -1.22
SMARCE1-214ENST00000578112 BTF3L4Q96K17 158 aa7.44□□□□□ -1.22
SMARCE1-214ENST00000578112 YPEL4Q96NS1 127 aa7.44□□□□□ -1.22
SMARCE1-214ENST00000578112 DNAH8Q96JB1 4490 aa7.44□□□□□ -1.22
SMARCE1-214ENST00000578112 H0YIZ8 118 aa7.44□□□□□ -1.22
SMARCE1-214ENST00000578112 RHODO00212 210 aa7.44□□□□□ -1.22
SMARCE1-214ENST00000578112 C4orf48Q5BLP8 95 aa7.44□□□□□ -1.22
SMARCE1-214ENST00000578112 GAGE10A6NGK3 116 aa7.43□□□□□ -1.22
SMARCE1-214ENST00000578112 HSD52Q0P140 79 aa7.43□□□□□ -1.22
SMARCE1-214ENST00000578112 TMEM75Q8N9X5 138 aa7.43□□□□□ -1.22
SMARCE1-214ENST00000578112 INO80EQ8NBZ0 244 aaPredicted RBP7.43□□□□□ -1.22
SMARCE1-214ENST00000578112 OR2G3Q8NGZ4 309 aa7.43□□□□□ -1.22
SMARCE1-214ENST00000578112 PARLQ9H300 379 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms