RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TRGV4A0A0C4DH28 118 aa7.78□□□□□ -1.16
CDK5RAP3-204ENST00000577664 PPBPP02775 128 aa7.78□□□□□ -1.16
CDK5RAP3-204ENST00000577664 AMN1Q8IY45 258 aa7.78□□□□□ -1.16
CDK5RAP3-204ENST00000577664 SLC25A29Q8N8R3 303 aa7.78□□□□□ -1.16
CDK5RAP3-204ENST00000577664 PHLDA1Q8WV24 401 aaPredicted RBP7.78□□□□□ -1.16
CDK5RAP3-204ENST00000577664 VSIG2Q96IQ7 327 aa7.78□□□□□ -1.16
CDK5RAP3-204ENST00000577664 TRBV6-5A0A0K0K1A5 114 aa7.77□□□□□ -1.17
CDK5RAP3-204ENST00000577664 PRSS47A8MTI9 375 aa7.77□□□□□ -1.17
CDK5RAP3-204ENST00000577664 H7C1H1 209 aa7.77□□□□□ -1.17
CDK5RAP3-204ENST00000577664 SCO1O75880 301 aa7.77□□□□□ -1.17
CDK5RAP3-204ENST00000577664 PPP1R17O96001 155 aa7.77□□□□□ -1.17
CDK5RAP3-204ENST00000577664 MRPL51Q4U2R6 128 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-204ENST00000577664 FAM74A4Q5TZK3 123 aa7.77□□□□□ -1.17
CDK5RAP3-204ENST00000577664 DNAJC30Q96LL9 226 aa7.77□□□□□ -1.17
CDK5RAP3-204ENST00000577664 DNAH2Q9P225 4427 aa7.77□□□□□ -1.17
CDK5RAP3-204ENST00000577664 F5H768 121 aa7.76□□□□□ -1.17
CDK5RAP3-204ENST00000577664 PHOX2AO14813 284 aa7.76□□□□□ -1.17
CDK5RAP3-204ENST00000577664 LINC00694P0DN24 101 aa7.76□□□□□ -1.17
CDK5RAP3-204ENST00000577664 TCTAP57738 103 aa7.76□□□□□ -1.17
CDK5RAP3-204ENST00000577664 RHOHQ15669 191 aa7.76□□□□□ -1.17
CDK5RAP3-204ENST00000577664 SUMO4Q6EEV6 95 aa7.76□□□□□ -1.17
CDK5RAP3-204ENST00000577664 CEMP1Q6PRD7 247 aaPredicted RBP7.76□□□□□ -1.17
CDK5RAP3-204ENST00000577664 PRADC1Q9BSG0 188 aa7.76□□□□□ -1.17
CDK5RAP3-204ENST00000577664 NIT2Q9NQR4 276 aa7.76□□□□□ -1.17
CDK5RAP3-204ENST00000577664 LAMTOR2Q9Y2Q5 125 aa7.76□□□□□ -1.17
CDK5RAP3-204ENST00000577664 TRAV26-1A0A087WT03 109 aa7.75□□□□□ -1.17
CDK5RAP3-204ENST00000577664 IGHV3-73A0A0B4J1V6 119 aa7.75□□□□□ -1.17
CDK5RAP3-204ENST00000577664 F5H697 171 aa7.75□□□□□ -1.17
CDK5RAP3-204ENST00000577664 K7EQD1 137 aa7.75□□□□□ -1.17
CDK5RAP3-204ENST00000577664 PAX4O43316 350 aa7.75□□□□□ -1.17
CDK5RAP3-204ENST00000577664 APCSP02743 223 aa7.75□□□□□ -1.17
CDK5RAP3-204ENST00000577664 ZNF56Q15929 161 aa7.75□□□□□ -1.17
CDK5RAP3-204ENST00000577664 TRBV7-3A0A075B6L6 115 aa7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 NUPR2A6NF83 97 aa7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 RAB5AP20339 215 aa7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 RPL32P62910 135 aaKnown RBP7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 SH2D6Q7Z4S9 175 aa7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 ORMDL3Q8N138 153 aa7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 NRACQ8N912 160 aa7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 C15orf53Q8NAA6 179 aa7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 NEXN-AS1Q8NBZ9 246 aa7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 C20orf78Q9BR46 151 aa7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 MRPL18Q9H0U6 180 aaKnown RBP7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 Q9UF83 564 aa7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 TRAPPC1Q9Y5R8 145 aa7.74□□□□□ -1.17
CDK5RAP3-204ENST00000577664 A0A1B0GVY2 172 aa7.73□□□□□ -1.17
CDK5RAP3-204ENST00000577664 GAS8-AS1O95177 125 aa7.73□□□□□ -1.17
CDK5RAP3-204ENST00000577664 MGPP08493 103 aa7.73□□□□□ -1.17
CDK5RAP3-204ENST00000577664 CKS2P33552 79 aa7.73□□□□□ -1.17
CDK5RAP3-204ENST00000577664 POLR2KP53803 58 aaKnown RBP7.73□□□□□ -1.17
CDK5RAP3-204ENST00000577664 MRPL23Q16540 153 aaKnown RBP7.73□□□□□ -1.17
CDK5RAP3-204ENST00000577664 DNAH6Q9C0G6 4158 aa7.73□□□□□ -1.17
CDK5RAP3-204ENST00000577664 DMBT1Q9UGM3 2413 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 A0A096LPF7 62 aa7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 TRAV26-2A0A0B4J265 109 aa7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 TRBV27A0A0K0K1C4 114 aa7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 D6R8Y8 96 aa7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 HTN3P15516 51 aa7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 TIRAPP58753 221 aa7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 UBE2D3P61077 147 aa7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 UBE2D2P62837 147 aa7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 RPL36AP83881 106 aaKnown RBP7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 DAZ4Q86SG3 579 aaKnown RBP7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 RPL36ALQ969Q0 106 aaKnown RBP7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 ALKBH7Q9BT30 221 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 DAZ3Q9NR90 486 aaKnown RBP7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 KLK5Q9Y337 293 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-204ENST00000577664 TNFRSF6BO95407 300 aa7.71□□□□□ -1.18
CDK5RAP3-204ENST00000577664 P0DMU3 169 aa7.71□□□□□ -1.18
CDK5RAP3-204ENST00000577664 FAM231AP0DMU4 169 aa7.71□□□□□ -1.18
CDK5RAP3-204ENST00000577664 FAM231CP0DMU5 169 aa7.71□□□□□ -1.18
CDK5RAP3-204ENST00000577664 GYPEP15421 78 aa7.71□□□□□ -1.18
CDK5RAP3-204ENST00000577664 RPS10P46783 165 aaKnown RBP7.71□□□□□ -1.18
CDK5RAP3-204ENST00000577664 FABP9Q0Z7S8 132 aa7.71□□□□□ -1.18
CDK5RAP3-204ENST00000577664 PRELID3AQ96N28 172 aa7.71□□□□□ -1.18
CDK5RAP3-204ENST00000577664 APLNQ9ULZ1 77 aa7.71□□□□□ -1.18
CDK5RAP3-204ENST00000577664 ICOSQ9Y6W8 199 aa7.71□□□□□ -1.18
CDK5RAP3-204ENST00000577664 A0A0J9YY99 117 aa7.7□□□□□ -1.18
CDK5RAP3-204ENST00000577664 LOC100131303A0A0U1RQF7 123 aa7.7□□□□□ -1.18
CDK5RAP3-204ENST00000577664 TRGC2P03986 189 aa7.7□□□□□ -1.18
CDK5RAP3-204ENST00000577664 SUMO2P61956 95 aaKnown RBP7.7□□□□□ -1.18
CDK5RAP3-204ENST00000577664 NEGR1Q7Z3B1 354 aa7.7□□□□□ -1.18
CDK5RAP3-204ENST00000577664 ZNRF2Q8NHG8 242 aa7.7□□□□□ -1.18
CDK5RAP3-204ENST00000577664 RPL39LQ96EH5 51 aaKnown RBP7.7□□□□□ -1.18
CDK5RAP3-204ENST00000577664 GTSF1LQ9H1H1 148 aa7.7□□□□□ -1.18
CDK5RAP3-204ENST00000577664 ST20Q9HBF5 79 aa7.7□□□□□ -1.18
CDK5RAP3-204ENST00000577664 TNFRSF18Q9Y5U5 241 aa7.7□□□□□ -1.18
CDK5RAP3-204ENST00000577664 DNAH17Q9UFH2 4485 aa7.7□□□□□ -1.18
CDK5RAP3-204ENST00000577664 IGLV2-18A0A075B6J9 118 aa7.69□□□□□ -1.18
CDK5RAP3-204ENST00000577664 LINC01546A6NGU7 62 aa7.69□□□□□ -1.18
CDK5RAP3-204ENST00000577664 IGLL5B9A064 214 aa7.69□□□□□ -1.18
CDK5RAP3-204ENST00000577664 SMKR1H3BMG3 65 aa7.69□□□□□ -1.18
CDK5RAP3-204ENST00000577664 K7EMI3 77 aa7.69□□□□□ -1.18
CDK5RAP3-204ENST00000577664 VCYO14598 125 aa7.69□□□□□ -1.18
CDK5RAP3-204ENST00000577664 NPYP01303 97 aa7.69□□□□□ -1.18
CDK5RAP3-204ENST00000577664 KIAA1644Q3SXP7 199 aa7.69□□□□□ -1.18
CDK5RAP3-204ENST00000577664 TMEM97Q5BJF2 176 aa7.69□□□□□ -1.18
CDK5RAP3-204ENST00000577664 OR10J3Q5JRS4 329 aa7.69□□□□□ -1.18
CDK5RAP3-204ENST00000577664 ATP6V0E2Q8NHE4 81 aa7.69□□□□□ -1.18
CDK5RAP3-204ENST00000577664 TMEM70Q9BUB7 260 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms