RNA–Protein interactions for RNA: ENST00000577208.5

NUP85-204, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-204ENST00000577208 TRAV3A0A0B4J244 114 aa3.29□□□□□ -1.88
NUP85-204ENST00000577208 PIGBOS1A0A0B4J2F0 54 aa3.29□□□□□ -1.88
NUP85-204ENST00000577208 CRYM-AS1A6NIL9 109 aa3.29□□□□□ -1.88
NUP85-204ENST00000577208 ZNF22P17026 224 aaPredicted RBP3.29□□□□□ -1.88
NUP85-204ENST00000577208 SMIM5Q71RC9 77 aa3.29□□□□□ -1.88
NUP85-204ENST00000577208 RPRMLQ8N4K4 120 aa3.29□□□□□ -1.88
NUP85-204ENST00000577208 MIR7-3HGQ8N6C7 128 aa3.29□□□□□ -1.88
NUP85-204ENST00000577208 S4R3C0 116 aa3.29□□□□□ -1.88
NUP85-204ENST00000577208 CLTCQ00610 1675 aaKnown RBP3.29□□□□□ -1.88
NUP85-204ENST00000577208 VWDEQ8N2E2 1590 aa3.29□□□□□ -1.88
NUP85-204ENST00000577208 SCN3AQ9NY46 2000 aa3.29□□□□□ -1.88
NUP85-204ENST00000577208 LCTP09848 1927 aa3.29□□□□□ -1.88
NUP85-204ENST00000577208 DIDO1Q9BTC0 2240 aaKnown RBP3.28□□□□□ -1.88
NUP85-204ENST00000577208 IFT172Q9UG01 1749 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 WIZO95785 1651 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 TRAV7A0A075B6U4 112 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 TRBV10-2A0A0K0K1G8 114 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 LHBP01229 141 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 UBE2D3P61077 147 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 UBE2D2P62837 147 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 ZNF791Q3KP31 576 aaPredicted RBP3.28□□□□□ -1.88
NUP85-204ENST00000577208 C9orf116Q5BN46 136 aaPredicted RBP3.28□□□□□ -1.88
NUP85-204ENST00000577208 RPL7L1Q6DKI1 246 aaKnown RBP3.28□□□□□ -1.88
NUP85-204ENST00000577208 FAM223AQ8IWN6 122 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 SMIM7Q9BQ49 75 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 BPESC1Q9GZL8 116 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 MANBALQ9NQG1 85 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 FAM215AQ9Y5M1 114 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 EML5Q05BV3 1969 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 TRPM7Q96QT4 1865 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 NEXMIFQ5QGS0 1516 aa3.28□□□□□ -1.88
NUP85-204ENST00000577208 MED13Q9UHV7 2174 aa3.27□□□□□ -1.89
NUP85-204ENST00000577208 MAST1Q9Y2H9 1570 aa3.27□□□□□ -1.89
NUP85-204ENST00000577208 A0A087WSZ3 146 aa3.27□□□□□ -1.89
NUP85-204ENST00000577208 LOC107984156A0A0G2JMH3 177 aa3.27□□□□□ -1.89
NUP85-204ENST00000577208 ARL17AQ8IVW1 177 aa3.27□□□□□ -1.89
NUP85-204ENST00000577208 SPANXA2-OT1Q8N9U9 137 aa3.27□□□□□ -1.89
NUP85-204ENST00000577208 FAM167A-AS1Q96KT0 104 aa3.27□□□□□ -1.89
NUP85-204ENST00000577208 CDC42SE1Q9NRR8 79 aa3.27□□□□□ -1.89
NUP85-204ENST00000577208 ICOSQ9Y6W8 199 aa3.27□□□□□ -1.89
NUP85-204ENST00000577208 SLX4Q8IY92 1834 aa3.27□□□□□ -1.89
NUP85-204ENST00000577208 LAMB1P07942 1786 aa3.27□□□□□ -1.89
NUP85-204ENST00000577208 ZNF142P52746 1687 aaPredicted RBP3.27□□□□□ -1.89
NUP85-204ENST00000577208 BIVM-ERCC5R4GMW8 1640 aa3.26□□□□□ -1.89
NUP85-204ENST00000577208 KIAA0586Q9BVV6 1533 aa3.26□□□□□ -1.89
NUP85-204ENST00000577208 TRBV7-1A0A0A6YYK4 115 aa3.26□□□□□ -1.89
NUP85-204ENST00000577208 HCG22E2RYF7 251 aa3.26□□□□□ -1.89
NUP85-204ENST00000577208 C5orf67F2Z3F1 127 aa3.26□□□□□ -1.89
NUP85-204ENST00000577208 NNATQ16517 81 aa3.26□□□□□ -1.89
NUP85-204ENST00000577208 PSMG4Q5JS54 123 aa3.26□□□□□ -1.89
NUP85-204ENST00000577208 FAM27BQ5VT28 67 aa3.26□□□□□ -1.89
NUP85-204ENST00000577208 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
NUP85-204ENST00000577208 ZCCHC23Q6ZST2 131 aa3.26□□□□□ -1.89
NUP85-204ENST00000577208 TIMM21Q9BVV7 248 aa3.26□□□□□ -1.89
NUP85-204ENST00000577208 IQGAP2Q13576 1575 aa3.25□□□□□ -1.89
NUP85-204ENST00000577208 MALRD1Q5VYJ5 2156 aa3.25□□□□□ -1.89
NUP85-204ENST00000577208 TRBV7-3A0A075B6L6 115 aa3.25□□□□□ -1.89
NUP85-204ENST00000577208 CRPP02741 224 aa3.25□□□□□ -1.89
NUP85-204ENST00000577208 P0C880 135 aa3.25□□□□□ -1.89
NUP85-204ENST00000577208 DEFA4P12838 97 aa3.25□□□□□ -1.89
NUP85-204ENST00000577208 ZNF56Q15929 161 aa3.25□□□□□ -1.89
NUP85-204ENST00000577208 MUC22E2RYF6 1773 aaPredicted RBP3.25□□□□□ -1.89
NUP85-204ENST00000577208 CRYBG1Q9Y4K1 1723 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 DOCK11Q5JSL3 2073 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 FXYD6-FXYD2A0A087WZ82 144 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 A0A0D9SFI3 127 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 A0A0G2JND7 137 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 TRBV10-3A0A0K0K1G6 114 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 H3BPC8 53 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 FXYD1O00168 92 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 PYDC2Q56P42 97 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 Q5VV11 94 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 C20orf166-AS1Q96NR2 134 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 FXYD6Q9H0Q3 95 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 TRAPPC1Q9Y5R8 145 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 BAZ2BQ9UIF8 2168 aaKnown RBP3.24□□□□□ -1.89
NUP85-204ENST00000577208 ALS2Q96Q42 1657 aa3.24□□□□□ -1.89
NUP85-204ENST00000577208 ARFGEF1Q9Y6D6 1849 aa3.23□□□□□ -1.89
NUP85-204ENST00000577208 ATP7BP35670 1465 aa3.23□□□□□ -1.89
NUP85-204ENST00000577208 TRAV22A0A0B4J277 110 aa3.23□□□□□ -1.89
NUP85-204ENST00000577208 A0A0B4J2C4 111 aa3.23□□□□□ -1.89
NUP85-204ENST00000577208 E7EUB6 86 aa3.23□□□□□ -1.89
NUP85-204ENST00000577208 H7C2G1 150 aa3.23□□□□□ -1.89
NUP85-204ENST00000577208 MGAMO43451 1857 aa3.23□□□□□ -1.89
NUP85-204ENST00000577208 SMIM11AP58511 58 aa3.23□□□□□ -1.89
NUP85-204ENST00000577208 COL4A4P53420 1690 aaPredicted RBP3.23□□□□□ -1.89
NUP85-204ENST00000577208 SLIT2O94813 1529 aa3.23□□□□□ -1.89
NUP85-204ENST00000577208 LTBP4Q8N2S1 1624 aa3.22□□□□□ -1.89
NUP85-204ENST00000577208 ABCA5Q8WWZ7 1642 aa3.22□□□□□ -1.89
NUP85-204ENST00000577208 CD163L1Q9NR16 1453 aa3.22□□□□□ -1.89
NUP85-204ENST00000577208 WDR90Q96KV7 1748 aa3.22□□□□□ -1.89
NUP85-204ENST00000577208 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.22□□□□□ -1.89
NUP85-204ENST00000577208 TRBV6-7A0A0A0MS04 114 aa3.22□□□□□ -1.89
NUP85-204ENST00000577208 C2orf70A6NJV1 201 aa3.22□□□□□ -1.89
NUP85-204ENST00000577208 IGKV1-17P01599 117 aa3.22□□□□□ -1.89
NUP85-204ENST00000577208 KRTAP13-2Q52LG2 175 aa3.22□□□□□ -1.89
NUP85-204ENST00000577208 ST20-AS1Q8NBB2 130 aa3.22□□□□□ -1.89
NUP85-204ENST00000577208 SPTSSBQ8NFR3 76 aa3.22□□□□□ -1.89
NUP85-204ENST00000577208 C14orf132Q9NPU4 83 aa3.22□□□□□ -1.89
NUP85-204ENST00000577208 PRO1854Q9UHT4 67 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms