RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 TMEM70Q9BUB7 260 aa9.07□□□□□ -0.96
RAB40B-204ENST00000571554 TEX46H3BTG2 121 aa9.06□□□□□ -0.96
RAB40B-204ENST00000571554 MEF2BQ02080 365 aaPredicted RBP9.06□□□□□ -0.96
RAB40B-204ENST00000571554 MPV17L2Q567V2 206 aa9.06□□□□□ -0.96
RAB40B-204ENST00000571554 C15orf54Q8N8G6 183 aa9.06□□□□□ -0.96
RAB40B-204ENST00000571554 FER1L6-AS1Q8NA97 138 aa9.06□□□□□ -0.96
RAB40B-204ENST00000571554 RMI2Q96E14 147 aa9.06□□□□□ -0.96
RAB40B-204ENST00000571554 AP1S3Q96PC3 154 aa9.06□□□□□ -0.96
RAB40B-204ENST00000571554 CHCHD5Q9BSY4 110 aa9.06□□□□□ -0.96
RAB40B-204ENST00000571554 MED9Q9NWA0 146 aa9.06□□□□□ -0.96
RAB40B-204ENST00000571554 KIF25-AS1Q9Y6Z4 181 aa9.06□□□□□ -0.96
RAB40B-204ENST00000571554 hCG_2014768A0A024R1R8 64 aa9.05□□□□□ -0.96
RAB40B-204ENST00000571554 TRBV20OR9-2A0A075B6H5 130 aa9.05□□□□□ -0.96
RAB40B-204ENST00000571554 C19orf71A6NCJ1 209 aa9.05□□□□□ -0.96
RAB40B-204ENST00000571554 IFNA1P01562 189 aa9.05□□□□□ -0.96
RAB40B-204ENST00000571554 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
RAB40B-204ENST00000571554 Q8N976 141 aa9.05□□□□□ -0.96
RAB40B-204ENST00000571554 C1QBP02746 253 aa9.04□□□□□ -0.96
RAB40B-204ENST00000571554 ANGP03950 147 aaKnown RBP9.04□□□□□ -0.96
RAB40B-204ENST00000571554 BCL2P10415 239 aa9.04□□□□□ -0.96
RAB40B-204ENST00000571554 ELOBQ15370 118 aa9.04□□□□□ -0.96
RAB40B-204ENST00000571554 CLPSL2Q6UWE3 100 aa9.04□□□□□ -0.96
RAB40B-204ENST00000571554 ENHOQ6UWT2 76 aa9.04□□□□□ -0.96
RAB40B-204ENST00000571554 NTM-AS1Q6ZSK4 140 aa9.04□□□□□ -0.96
RAB40B-204ENST00000571554 SLC51BQ86UW2 128 aa9.04□□□□□ -0.96
RAB40B-204ENST00000571554 DEFB104AQ8WTQ1 72 aa9.04□□□□□ -0.96
RAB40B-204ENST00000571554 CHCHD7Q9BUK0 85 aa9.04□□□□□ -0.96
RAB40B-204ENST00000571554 COX11Q9Y6N1 276 aa9.04□□□□□ -0.96
RAB40B-204ENST00000571554 PDE6DO43924 150 aa9.03□□□□□ -0.96
RAB40B-204ENST00000571554 P01737 135 aa9.03□□□□□ -0.96
RAB40B-204ENST00000571554 CRPP02741 224 aa9.03□□□□□ -0.96
RAB40B-204ENST00000571554 GAGE6Q13070 117 aa9.03□□□□□ -0.96
RAB40B-204ENST00000571554 SUMO4Q6EEV6 95 aa9.03□□□□□ -0.96
RAB40B-204ENST00000571554 FAM229AH3BQW9 127 aa9.02□□□□□ -0.97
RAB40B-204ENST00000571554 RPS20P60866 119 aaKnown RBP9.02□□□□□ -0.97
RAB40B-204ENST00000571554 ATRAIDQ6UW56 229 aa9.02□□□□□ -0.97
RAB40B-204ENST00000571554 LYZL1Q6UWQ5 148 aa9.02□□□□□ -0.97
RAB40B-204ENST00000571554 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.02□□□□□ -0.97
RAB40B-204ENST00000571554 C1orf43Q9BWL3 253 aa9.02□□□□□ -0.97
RAB40B-204ENST00000571554 VAX2Q9UIW0 290 aa9.02□□□□□ -0.97
RAB40B-204ENST00000571554 SRRM2Q9UQ35 2752 aaKnown RBP9.02□□□□□ -0.97
RAB40B-204ENST00000571554 M0QY20 66 aa9.01□□□□□ -0.97
RAB40B-204ENST00000571554 HLA-DQA1P01909 254 aa9.01□□□□□ -0.97
RAB40B-204ENST00000571554 NKX2-5P52952 324 aaPredicted RBP9.01□□□□□ -0.97
RAB40B-204ENST00000571554 CACNG7P62955 275 aa9.01□□□□□ -0.97
RAB40B-204ENST00000571554 Q0VG73 95 aa9.01□□□□□ -0.97
RAB40B-204ENST00000571554 Q6ZNX1 250 aa9.01□□□□□ -0.97
RAB40B-204ENST00000571554 ALKAL2Q6UX46 152 aa9□□□□□ -0.97
RAB40B-204ENST00000571554 AKAP14Q86UN6 197 aa9□□□□□ -0.97
RAB40B-204ENST00000571554 C9orf62Q8N4C0 152 aa9□□□□□ -0.97
RAB40B-204ENST00000571554 NUDT10Q8NFP7 164 aa9□□□□□ -0.97
RAB40B-204ENST00000571554 SMIM12Q96EX1 92 aa9□□□□□ -0.97
RAB40B-204ENST00000571554 NUDT11Q96G61 164 aa9□□□□□ -0.97
RAB40B-204ENST00000571554 RNASE7Q9H1E1 156 aaKnown RBP9□□□□□ -0.97
RAB40B-204ENST00000571554 FLG2Q5D862 2391 aaPredicted RBP9□□□□□ -0.97
RAB40B-204ENST00000571554 TRBV25-1A0A075B6N4 114 aa8.99□□□□□ -0.97
RAB40B-204ENST00000571554 XKRY2A2RUG3 117 aa8.99□□□□□ -0.97
RAB40B-204ENST00000571554 K7EN84 100 aa8.99□□□□□ -0.97
RAB40B-204ENST00000571554 NTF3P20783 257 aa8.99□□□□□ -0.97
RAB40B-204ENST00000571554 RBX1P62877 108 aa8.99□□□□□ -0.97
RAB40B-204ENST00000571554 Q6ZSA8 131 aa8.99□□□□□ -0.97
RAB40B-204ENST00000571554 HERC1Q15751 4861 aa8.99□□□□□ -0.97
RAB40B-204ENST00000571554 MYCBP2O75592 4640 aa8.98□□□□□ -0.97
RAB40B-204ENST00000571554 F2Z2F3 143 aa8.98□□□□□ -0.97
RAB40B-204ENST00000571554 H7C1H1 209 aa8.98□□□□□ -0.97
RAB40B-204ENST00000571554 SCXQ7RTU7 201 aa8.98□□□□□ -0.97
RAB40B-204ENST00000571554 LINC00528Q8N1L1 170 aa8.98□□□□□ -0.97
RAB40B-204ENST00000571554 LINC00269Q8N2A0 174 aa8.98□□□□□ -0.97
RAB40B-204ENST00000571554 OCC1Q8TAD7 63 aa8.98□□□□□ -0.97
RAB40B-204ENST00000571554 IGHV1-24A0A0C4DH33 117 aa8.97□□□□□ -0.97
RAB40B-204ENST00000571554 USP17L23D6RBM5 183 aa8.97□□□□□ -0.97
RAB40B-204ENST00000571554 TRGC1P0CF51 173 aa8.97□□□□□ -0.97
RAB40B-204ENST00000571554 CEBPGP53567 150 aa8.97□□□□□ -0.97
RAB40B-204ENST00000571554 TWIST1Q15672 202 aa8.97□□□□□ -0.97
RAB40B-204ENST00000571554 TMEM97Q5BJF2 176 aa8.97□□□□□ -0.97
RAB40B-204ENST00000571554 RASL11AQ6T310 242 aa8.97□□□□□ -0.97
RAB40B-204ENST00000571554 DPH3P1Q9H4G8 78 aa8.97□□□□□ -0.97
RAB40B-204ENST00000571554 RPP21Q9H633 154 aaKnown RBP8.97□□□□□ -0.97
RAB40B-204ENST00000571554 BIN3Q9NQY0 253 aa8.97□□□□□ -0.97
RAB40B-204ENST00000571554 IGLV10-54A0A075B6I4 117 aa8.96□□□□□ -0.98
RAB40B-204ENST00000571554 TRAV26-2A0A0B4J265 109 aa8.96□□□□□ -0.98
RAB40B-204ENST00000571554 CTRLP40313 264 aa8.96□□□□□ -0.98
RAB40B-204ENST00000571554 PKIAP61925 76 aa8.96□□□□□ -0.98
RAB40B-204ENST00000571554 MIAQ16674 131 aa8.96□□□□□ -0.98
RAB40B-204ENST00000571554 IQCJQ1A5X6 159 aa8.96□□□□□ -0.98
RAB40B-204ENST00000571554 TAGLN2P37802 199 aaKnown RBP8.95□□□□□ -0.98
RAB40B-204ENST00000571554 DMBT1Q9UGM3 2413 aaPredicted RBP8.95□□□□□ -0.98
RAB40B-204ENST00000571554 IGLV4-60A0A075B6I1 120 aa8.94□□□□□ -0.98
RAB40B-204ENST00000571554 PRSS1P07477 247 aa8.94□□□□□ -0.98
RAB40B-204ENST00000571554 FOXA3P55318 350 aaPredicted RBP8.94□□□□□ -0.98
RAB40B-204ENST00000571554 REG3AQ06141 175 aa8.94□□□□□ -0.98
RAB40B-204ENST00000571554 C14orf177Q52M58 125 aa8.94□□□□□ -0.98
RAB40B-204ENST00000571554 C20orf203Q8NBC4 194 aa8.94□□□□□ -0.98
RAB40B-204ENST00000571554 GTSF1Q8WW33 167 aa8.94□□□□□ -0.98
RAB40B-204ENST00000571554 TMEM243Q9BU79 118 aa8.94□□□□□ -0.98
RAB40B-204ENST00000571554 GFRA4Q9GZZ7 299 aa8.94□□□□□ -0.98
RAB40B-204ENST00000571554 NIT2Q9NQR4 276 aa8.94□□□□□ -0.98
RAB40B-204ENST00000571554 PRR34Q9NV39 138 aa8.94□□□□□ -0.98
RAB40B-204ENST00000571554 BLOC1S1P78537 153 aa8.93□□□□□ -0.98
RAB40B-204ENST00000571554 KRTAP26-1Q6PEX3 210 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms