RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SH2D1AO60880 128 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 NDUFC2O95298 119 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 NAPSAO96009 420 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 C1QBP02746 253 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 CD2P06729 351 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 S100A7P31151 101 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 RPL27AP46776 148 aaKnown RBP1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 ATP5G3P48201 142 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 RPS11P62280 158 aaKnown RBP eCLIP1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 SURF2Q15527 256 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 RTL8BQ17RB0 113 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 MRPL51Q4U2R6 128 aaKnown RBP1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 LINC00483Q53H64 154 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 SAMD13Q5VXD3 122 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 GLT8D1Q68CQ7 371 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 ZNF880Q6PDB4 577 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 AMTNQ6UX39 209 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 TCF24Q7RTU0 167 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 ARHGAP5-AS1Q96IT6 56 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 IGF2BP2-AS1Q96M15 143 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 MGLLQ99685 303 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 SPIN2AQ99865 258 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 SPIN2BQ9BPZ2 258 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 RHPN1-AS1Q9BWJ2 59 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 TTTY13Q9BZ97 58 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 C6orf62Q9GZU0 229 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 VCXQ9H320 206 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 LYRM2Q9NU23 88 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 GSKIPQ9P0R6 139 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 RABAC1Q9UI14 185 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 LINC00588Q9Y4M8 146 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 TMEM56-RWDD3S4R434 201 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 VPS13BQ7Z7G8 4022 aa1.94□□□□□ -2.1
HMGB1P6-201ENST00000569046 TRAV9-1A0A075B6T8 112 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 IGKV1OR2-108A0A075B7D4 117 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 TRBV7-1A0A0A6YYK4 115 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 NBDYA0A0U1RRE5 68 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 TCRBV3S1A0A5B6 114 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 IGSF23A1L1A6 192 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 C7orf66A4D0T2 115 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 C9JCJ5 164 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 LECT2O14960 151 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 MRPS14O60783 128 aaKnown RBP1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 MED6O75586 246 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 PRB4P10163 310 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 MIFP14174 115 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 ATP6V0CP27449 155 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 Q56UQ5 140 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 TMEM128Q5BJH2 165 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 C10orf91Q5T1B1 145 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 IBA57Q5T440 356 aaKnown RBP1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 RPL22L1Q6P5R6 122 aaKnown RBP1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 RASL11AQ6T310 242 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 H1FOOQ8IZA3 346 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 EXOC3-AS1Q8N2X6 119 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 ZNF664Q8N3J9 261 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 OR13C8Q8NGS7 320 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 MBD3L1Q8WWY6 194 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 GPR146Q96CH1 333 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 ZNF2Q9BSG1 426 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 LPAR5Q9H1C0 372 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 TMEM14BQ9NUH8 114 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 TAS2R8Q9NYW2 309 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 TP73-AS1Q9UF72 201 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 TRAPPC1Q9Y5R8 145 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 SRRM2Q9UQ35 2752 aaKnown RBP1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 DNAH5Q8TE73 4624 aa1.93□□□□□ -2.1
HMGB1P6-201ENST00000569046 TRBV24-1A0A075B6N3 115 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 TRAV14DV4A0A0A6YYC5 116 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 IGLC7A0M8Q6 106 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 A8MUU9 505 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 C1orf196B1AJZ1 125 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 IGLV7-43P04211 117 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 CTSGP08311 255 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 SRP19P09132 144 aaKnown RBP1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 SPART-AS1P0CW21 52 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 NFYAP23511 347 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 CSN1S1P47710 185 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 AKR1C2P52895 323 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 TSPEAR-AS2P59090 65 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 RBX1P62877 108 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 GNGT1P63211 74 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 TMEM78Q5T7P6 136 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 GDF5OSQ5U4N7 250 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 ZFAND2AQ8N6M9 145 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 TMEM167AQ8TBQ9 72 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 DNAJC9Q8WXX5 260 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 BORCS5Q969J3 196 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 SEC22CQ9BRL7 303 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 GINS4Q9BRT9 223 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 NKX6-2Q9C056 277 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 CKLFQ9UBR5 152 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 HSPB11Q9Y547 144 aa1.92□□□□□ -2.1
HMGB1P6-201ENST00000569046 FAT1Q14517 4588 aa1.91□□□□□ -2.1
HMGB1P6-201ENST00000569046 TRBV6-7A0A0A0MS04 114 aa1.91□□□□□ -2.1
HMGB1P6-201ENST00000569046 A0A1W2PRE2 83 aa1.91□□□□□ -2.1
HMGB1P6-201ENST00000569046 TMEM14DPA8MWL7 114 aa1.91□□□□□ -2.1
HMGB1P6-201ENST00000569046 K7EIM0 57 aa1.91□□□□□ -2.1
HMGB1P6-201ENST00000569046 NDUFA4O00483 81 aa1.91□□□□□ -2.1
HMGB1P6-201ENST00000569046 DEFB130BP0DP73 79 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms