RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 NSUN5P1Q3KNT7 163 aa13.23□□□□□ -0.29
SMPD3-211ENST00000568373 CYSLTR1Q9Y271 337 aa13.23□□□□□ -0.29
SMPD3-211ENST00000568373 PLNP26678 52 aa13.22□□□□□ -0.29
SMPD3-211ENST00000568373 NMUP48645 174 aa13.22□□□□□ -0.29
SMPD3-211ENST00000568373 C11orf72Q8NBR9 251 aa13.22□□□□□ -0.29
SMPD3-211ENST00000568373 NEXN-AS1Q8NBZ9 246 aa13.22□□□□□ -0.29
SMPD3-211ENST00000568373 PTH2Q96A98 100 aa13.22□□□□□ -0.29
SMPD3-211ENST00000568373 XCL2Q9UBD3 114 aa13.22□□□□□ -0.29
SMPD3-211ENST00000568373 TEP1Q99973 2627 aaKnown RBP13.22□□□□□ -0.29
SMPD3-211ENST00000568373 LINC01549A6NIU2 74 aa13.22□□□□□ -0.29
SMPD3-211ENST00000568373 DLEU1O43261 78 aa13.22□□□□□ -0.29
SMPD3-211ENST00000568373 C12orf54Q6X4T0 127 aa13.22□□□□□ -0.29
SMPD3-211ENST00000568373 A8MWV9 139 aa13.21□□□□□ -0.29
SMPD3-211ENST00000568373 F8VRH5 84 aa13.21□□□□□ -0.29
SMPD3-211ENST00000568373 H7C1H1 209 aa13.21□□□□□ -0.29
SMPD3-211ENST00000568373 IGLV1-51P01701 117 aa13.21□□□□□ -0.29
SMPD3-211ENST00000568373 ZC2HC1BQ5TFG8 222 aa13.21□□□□□ -0.29
SMPD3-211ENST00000568373 BAALCQ8WXS3 180 aa13.21□□□□□ -0.29
SMPD3-211ENST00000568373 EDA2RQ9HAV5 297 aa13.21□□□□□ -0.29
SMPD3-211ENST00000568373 CMC4P56277 68 aaPredicted RBP13.2□□□□□ -0.3
SMPD3-211ENST00000568373 PCP2Q8IVA1 136 aa13.2□□□□□ -0.3
SMPD3-211ENST00000568373 TP53TG1Q9Y2A0 90 aa13.2□□□□□ -0.3
SMPD3-211ENST00000568373 RIPPLY3P57055 190 aa13.2□□□□□ -0.3
SMPD3-211ENST00000568373 BVES-AS1Q5T3Y7 98 aa13.2□□□□□ -0.3
SMPD3-211ENST00000568373 DEFB104AQ8WTQ1 72 aa13.2□□□□□ -0.3
SMPD3-211ENST00000568373 IGKV2D-26A0A0A0MRZ7 120 aa13.19□□□□□ -0.3
SMPD3-211ENST00000568373 UFSP1Q6NVU6 142 aa13.19□□□□□ -0.3
SMPD3-211ENST00000568373 SPXQ9BT56 116 aa13.19□□□□□ -0.3
SMPD3-211ENST00000568373 CHTOPQ9Y3Y2 248 aaKnown RBP13.19□□□□□ -0.3
SMPD3-211ENST00000568373 JMJD1CQ15652 2540 aa13.19□□□□□ -0.3
SMPD3-211ENST00000568373 NSD1Q96L73 2696 aaPredicted RBP13.19□□□□□ -0.3
SMPD3-211ENST00000568373 GTSCR1Q86UQ5 136 aa13.19□□□□□ -0.3
SMPD3-211ENST00000568373 TMEM208Q9BTX3 173 aa13.19□□□□□ -0.3
SMPD3-211ENST00000568373 NACAE9PAV3 2078 aa13.18□□□□□ -0.3
SMPD3-211ENST00000568373 IGIPA6NJ69 53 aa13.18□□□□□ -0.3
SMPD3-211ENST00000568373 SIVA1O15304 175 aa13.18□□□□□ -0.3
SMPD3-211ENST00000568373 KRTAP10-3P60369 221 aa13.18□□□□□ -0.3
SMPD3-211ENST00000568373 NDUFA11Q86Y39 141 aa13.18□□□□□ -0.3
SMPD3-211ENST00000568373 C1orf158Q8N1D5 194 aa13.18□□□□□ -0.3
SMPD3-211ENST00000568373 IGHV3-73A0A0B4J1V6 119 aa13.17□□□□□ -0.3
SMPD3-211ENST00000568373 INAFM1C9JVW0 142 aa13.17□□□□□ -0.3
SMPD3-211ENST00000568373 FAM110AQ9BQ89 295 aa13.17□□□□□ -0.3
SMPD3-211ENST00000568373 RPL39P62891 51 aaKnown RBP13.17□□□□□ -0.3
SMPD3-211ENST00000568373 RHOHQ15669 191 aa13.17□□□□□ -0.3
SMPD3-211ENST00000568373 PRSS29PA6NIE9 313 aa13.16□□□□□ -0.3
SMPD3-211ENST00000568373 TSHBP01222 138 aa13.16□□□□□ -0.3
SMPD3-211ENST00000568373 ZNF25P17030 456 aaPredicted RBP13.16□□□□□ -0.3
SMPD3-211ENST00000568373 BEAN1Q3B7T3 259 aa13.16□□□□□ -0.3
SMPD3-211ENST00000568373 CFAP126Q5VTH2 177 aa13.16□□□□□ -0.3
SMPD3-211ENST00000568373 TIMM17AQ99595 171 aa13.16□□□□□ -0.3
SMPD3-211ENST00000568373 FN1P02751 2386 aaKnown RBP13.16□□□□□ -0.3
SMPD3-211ENST00000568373 I3L3M4 83 aa13.16□□□□□ -0.3
SMPD3-211ENST00000568373 AZU1P20160 251 aa13.16□□□□□ -0.3
SMPD3-211ENST00000568373 TMEM141Q96I45 108 aa13.16□□□□□ -0.3
SMPD3-211ENST00000568373 IGHV3OR16-12A0A075B7B8 117 aa13.15□□□□□ -0.3
SMPD3-211ENST00000568373 MRPL16Q9NX20 251 aaKnown RBP13.15□□□□□ -0.3
SMPD3-211ENST00000568373 C2CD3Q4AC94 2353 aa13.15□□□□□ -0.31
SMPD3-211ENST00000568373 RHODO00212 210 aa13.14□□□□□ -0.31
SMPD3-211ENST00000568373 C19orf73Q9NVV2 129 aa13.14□□□□□ -0.31
SMPD3-211ENST00000568373 P0DMU3 169 aa13.14□□□□□ -0.31
SMPD3-211ENST00000568373 FAM231AP0DMU4 169 aa13.14□□□□□ -0.31
SMPD3-211ENST00000568373 FAM231CP0DMU5 169 aa13.14□□□□□ -0.31
SMPD3-211ENST00000568373 TMEM97Q5BJF2 176 aa13.14□□□□□ -0.31
SMPD3-211ENST00000568373 IL17DQ8TAD2 202 aa13.13□□□□□ -0.31
SMPD3-211ENST00000568373 TTTY13Q9BZ97 58 aa13.13□□□□□ -0.31
SMPD3-211ENST00000568373 WFDC10AQ9H1F0 79 aa13.13□□□□□ -0.31
SMPD3-211ENST00000568373 GAGE1Q13065 139 aa13.12□□□□□ -0.31
SMPD3-211ENST00000568373 Q6ZSN1 163 aa13.12□□□□□ -0.31
SMPD3-211ENST00000568373 RS1O15537 224 aa13.12□□□□□ -0.31
SMPD3-211ENST00000568373 PF4P02776 101 aa13.12□□□□□ -0.31
SMPD3-211ENST00000568373 PMVKQ15126 192 aa13.12□□□□□ -0.31
SMPD3-211ENST00000568373 RNASE8Q8TDE3 154 aaKnown RBP13.12□□□□□ -0.31
SMPD3-211ENST00000568373 GIG44P09565 113 aaPredicted RBP13.11□□□□□ -0.31
SMPD3-211ENST00000568373 HSD52Q0P140 79 aa13.11□□□□□ -0.31
SMPD3-211ENST00000568373 C20orf203Q8NBC4 194 aa13.11□□□□□ -0.31
SMPD3-211ENST00000568373 TNFRSF18Q9Y5U5 241 aa13.11□□□□□ -0.31
SMPD3-211ENST00000568373 NOTCH3Q9UM47 2321 aa13.11□□□□□ -0.31
SMPD3-211ENST00000568373 LINC00482Q8N8I6 264 aa13.11□□□□□ -0.31
SMPD3-211ENST00000568373 COX11Q9Y6N1 276 aa13.11□□□□□ -0.31
SMPD3-211ENST00000568373 IGHV3-53P01767 116 aa13.1□□□□□ -0.31
SMPD3-211ENST00000568373 Q6ZVH6 145 aa13.1□□□□□ -0.31
SMPD3-211ENST00000568373 TMEM263Q8WUH6 116 aaKnown RBP13.1□□□□□ -0.31
SMPD3-211ENST00000568373 CST9LQ9H4G1 147 aa13.1□□□□□ -0.31
SMPD3-211ENST00000568373 HIGD1BQ9P298 99 aa13.1□□□□□ -0.31
SMPD3-211ENST00000568373 SEC11AP67812 179 aa13.09□□□□□ -0.31
SMPD3-211ENST00000568373 ORAOV1Q8WV07 137 aa13.09□□□□□ -0.31
SMPD3-211ENST00000568373 IGLV4-69A0A075B6H9 119 aa13.09□□□□□ -0.31
SMPD3-211ENST00000568373 TRAV8-6A0A0B4J262 113 aa13.09□□□□□ -0.31
SMPD3-211ENST00000568373 Q9UF83 564 aa13.09□□□□□ -0.31
SMPD3-211ENST00000568373 TRBV25-1A0A075B6N4 114 aa13.08□□□□□ -0.32
SMPD3-211ENST00000568373 RPL35AP18077 110 aaKnown RBP13.08□□□□□ -0.32
SMPD3-211ENST00000568373 PAPPA-AS1Q5QFB9 102 aa13.08□□□□□ -0.32
SMPD3-211ENST00000568373 TRGV1A0A0A0MS02 117 aa13.08□□□□□ -0.32
SMPD3-211ENST00000568373 TAX1BP3O14907 124 aa13.08□□□□□ -0.32
SMPD3-211ENST00000568373 MAPKAPK5-AS1Q8N8E1 139 aa13.07□□□□□ -0.32
SMPD3-211ENST00000568373 DNAJC30Q96LL9 226 aa13.07□□□□□ -0.32
SMPD3-211ENST00000568373 C1QTNF4Q9BXJ3 329 aa13.07□□□□□ -0.32
SMPD3-211ENST00000568373 C11orf86A6NJI1 115 aa13.06□□□□□ -0.32
SMPD3-211ENST00000568373 OR11H2Q8NH07 326 aa13.06□□□□□ -0.32
SMPD3-211ENST00000568373 E9PLD3 99 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms