RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 EIF5AL1Q6IS14 154 aaKnown RBP8.03□□□□□ -1.12
GTF3C1-204ENST00000564664 PRR27Q6MZM9 219 aa8.03□□□□□ -1.12
GTF3C1-204ENST00000564664 UQCC3Q6UW78 93 aa8.03□□□□□ -1.12
GTF3C1-204ENST00000564664 BAALCQ8WXS3 180 aa8.03□□□□□ -1.12
GTF3C1-204ENST00000564664 FLG2Q5D862 2391 aaPredicted RBP8.02□□□□□ -1.13
GTF3C1-204ENST00000564664 SCO2A0A1W2PP80 73 aa8.02□□□□□ -1.13
GTF3C1-204ENST00000564664 RBFOX3A6NFN3 312 aa8.02□□□□□ -1.13
GTF3C1-204ENST00000564664 TMEM262E9PQX1 116 aa8.02□□□□□ -1.13
GTF3C1-204ENST00000564664 SPANXN1Q5VSR9 72 aa8.02□□□□□ -1.13
GTF3C1-204ENST00000564664 UBE2WQ96B02 151 aa8.02□□□□□ -1.13
GTF3C1-204ENST00000564664 TRAV1-1A0A0B4J248 108 aa8.01□□□□□ -1.13
GTF3C1-204ENST00000564664 TEX46H3BTG2 121 aa8.01□□□□□ -1.13
GTF3C1-204ENST00000564664 LECT2O14960 151 aa8.01□□□□□ -1.13
GTF3C1-204ENST00000564664 RAB5CP51148 216 aa8.01□□□□□ -1.13
GTF3C1-204ENST00000564664 OR10AG1Q8NH19 301 aa8.01□□□□□ -1.13
GTF3C1-204ENST00000564664 MANBALQ9NQG1 85 aa8.01□□□□□ -1.13
GTF3C1-204ENST00000564664 DNAH8Q96JB1 4490 aa8□□□□□ -1.13
GTF3C1-204ENST00000564664 IGLV2-33A0A075B6J2 118 aaPredicted RBP8□□□□□ -1.13
GTF3C1-204ENST00000564664 SMIM17P0DL12 118 aa8□□□□□ -1.13
GTF3C1-204ENST00000564664 ZNF56Q15929 161 aa8□□□□□ -1.13
GTF3C1-204ENST00000564664 ALKAL2Q6UX46 152 aa8□□□□□ -1.13
GTF3C1-204ENST00000564664 NEXN-AS1Q8NBZ9 246 aa8□□□□□ -1.13
GTF3C1-204ENST00000564664 SMIM12Q96EX1 92 aa8□□□□□ -1.13
GTF3C1-204ENST00000564664 C1orf43Q9BWL3 253 aa8□□□□□ -1.13
GTF3C1-204ENST00000564664 VAX2Q9UIW0 290 aa8□□□□□ -1.13
GTF3C1-204ENST00000564664 F5H697 171 aa7.99□□□□□ -1.13
GTF3C1-204ENST00000564664 RPL35P42766 123 aaKnown RBP7.99□□□□□ -1.13
GTF3C1-204ENST00000564664 RPS20P60866 119 aaKnown RBP7.99□□□□□ -1.13
GTF3C1-204ENST00000564664 HAMPP81172 84 aa7.99□□□□□ -1.13
GTF3C1-204ENST00000564664 RPL19P84098 196 aaKnown RBP7.99□□□□□ -1.13
GTF3C1-204ENST00000564664 C11orf52Q96A22 123 aa7.99□□□□□ -1.13
GTF3C1-204ENST00000564664 DAZAP1Q96EP5 407 aaKnown RBP7.99□□□□□ -1.13
GTF3C1-204ENST00000564664 A0A1B0GV50 99 aa7.98□□□□□ -1.13
GTF3C1-204ENST00000564664 CRPP02741 224 aa7.98□□□□□ -1.13
GTF3C1-204ENST00000564664 MIAQ16674 131 aa7.98□□□□□ -1.13
GTF3C1-204ENST00000564664 ENHOQ6UWT2 76 aa7.98□□□□□ -1.13
GTF3C1-204ENST00000564664 DEFB104AQ8WTQ1 72 aa7.98□□□□□ -1.13
GTF3C1-204ENST00000564664 DNAJC30Q96LL9 226 aa7.98□□□□□ -1.13
GTF3C1-204ENST00000564664 AP1S3Q96PC3 154 aa7.98□□□□□ -1.13
GTF3C1-204ENST00000564664 CHAC1Q9BUX1 264 aa7.98□□□□□ -1.13
GTF3C1-204ENST00000564664 BIN3Q9NQY0 253 aa7.98□□□□□ -1.13
GTF3C1-204ENST00000564664 KIF25-AS1Q9Y6Z4 181 aa7.98□□□□□ -1.13
GTF3C1-204ENST00000564664 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
GTF3C1-204ENST00000564664 XKRY2A2RUG3 117 aa7.97□□□□□ -1.13
GTF3C1-204ENST00000564664 F2Z2F3 143 aa7.97□□□□□ -1.13
GTF3C1-204ENST00000564664 H7C1H1 209 aa7.97□□□□□ -1.13
GTF3C1-204ENST00000564664 CACNG7P62955 275 aa7.97□□□□□ -1.13
GTF3C1-204ENST00000564664 BLOC1S1P78537 153 aa7.97□□□□□ -1.13
GTF3C1-204ENST00000564664 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
GTF3C1-204ENST00000564664 C15orf54Q8N8G6 183 aa7.97□□□□□ -1.13
GTF3C1-204ENST00000564664 LYPD6BQ8NI32 183 aa7.97□□□□□ -1.13
GTF3C1-204ENST00000564664 CHCHD5Q9BSY4 110 aa7.97□□□□□ -1.13
GTF3C1-204ENST00000564664 GNG13Q9P2W3 67 aa7.97□□□□□ -1.13
GTF3C1-204ENST00000564664 TRBV25-1A0A075B6N4 114 aa7.96□□□□□ -1.14
GTF3C1-204ENST00000564664 PDE6DO43924 150 aa7.96□□□□□ -1.14
GTF3C1-204ENST00000564664 ANGP03950 147 aaKnown RBP7.96□□□□□ -1.14
GTF3C1-204ENST00000564664 SULT1A2P50226 295 aa7.96□□□□□ -1.14
GTF3C1-204ENST00000564664 CCL20P78556 96 aa7.96□□□□□ -1.14
GTF3C1-204ENST00000564664 MPV17L2Q567V2 206 aa7.96□□□□□ -1.14
GTF3C1-204ENST00000564664 DGAT2L7PQ6IED9 249 aa7.96□□□□□ -1.14
GTF3C1-204ENST00000564664 PRR34Q9NV39 138 aa7.96□□□□□ -1.14
GTF3C1-204ENST00000564664 MUC21A0A0G2JKD1 596 aa7.95□□□□□ -1.14
GTF3C1-204ENST00000564664 MUC21A0A140T8X8 626 aa7.95□□□□□ -1.14
GTF3C1-204ENST00000564664 J3QL48 77 aa7.95□□□□□ -1.14
GTF3C1-204ENST00000564664 IGLC6P0CF74 106 aa7.95□□□□□ -1.14
GTF3C1-204ENST00000564664 TAGLN2P37802 199 aaKnown RBP7.95□□□□□ -1.14
GTF3C1-204ENST00000564664 IQCJQ1A5X6 159 aa7.95□□□□□ -1.14
GTF3C1-204ENST00000564664 C10orf91Q5T1B1 145 aa7.95□□□□□ -1.14
GTF3C1-204ENST00000564664 WDR73Q6P4I2 378 aa7.95□□□□□ -1.14
GTF3C1-204ENST00000564664 FER1L6-AS1Q8NA97 138 aa7.95□□□□□ -1.14
GTF3C1-204ENST00000564664 DERL1Q9BUN8 251 aa7.95□□□□□ -1.14
GTF3C1-204ENST00000564664 IGHV1-24A0A0C4DH33 117 aa7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 C19orf71A6NCJ1 209 aa7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 KRTAP29-1A8MX34 341 aaPredicted RBP7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 M0QY20 66 aa7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 IFNA1P01562 189 aa7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 GNG4P50150 75 aa7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 MEF2BQ02080 365 aaPredicted RBP7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 CENPWQ5EE01 88 aa7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 NTM-AS1Q6ZSK4 140 aa7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 SCXQ7RTU7 201 aa7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 OR2D3Q8NGH3 330 aa7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 SMDT1Q9H4I9 107 aa7.94□□□□□ -1.14
GTF3C1-204ENST00000564664 IGLV2-8P01709 118 aa7.93□□□□□ -1.14
GTF3C1-204ENST00000564664 P01737 135 aa7.93□□□□□ -1.14
GTF3C1-204ENST00000564664 TRGC1P0CF51 173 aa7.93□□□□□ -1.14
GTF3C1-204ENST00000564664 SSTP61278 116 aa7.93□□□□□ -1.14
GTF3C1-204ENST00000564664 RBX1P62877 108 aa7.93□□□□□ -1.14
GTF3C1-204ENST00000564664 LINC01620Q4KN68 170 aa7.93□□□□□ -1.14
GTF3C1-204ENST00000564664 CLRN3Q8NCR9 226 aa7.93□□□□□ -1.14
GTF3C1-204ENST00000564664 CIRBP-AS1Q8TBR5 109 aa7.93□□□□□ -1.14
GTF3C1-204ENST00000564664 TRAV8-4A0A0B4J246 113 aa7.92□□□□□ -1.14
GTF3C1-204ENST00000564664 A0A1B0GUV1 79 aa7.92□□□□□ -1.14
GTF3C1-204ENST00000564664 USP17L23D6RBM5 183 aa7.92□□□□□ -1.14
GTF3C1-204ENST00000564664 LINC00269Q8N2A0 174 aa7.92□□□□□ -1.14
GTF3C1-204ENST00000564664 TPPP3Q9BW30 176 aa7.92□□□□□ -1.14
GTF3C1-204ENST00000564664 CARHSP1Q9Y2V2 147 aaKnown RBP7.92□□□□□ -1.14
GTF3C1-204ENST00000564664 TMEM218A2RU14 115 aa7.91□□□□□ -1.14
GTF3C1-204ENST00000564664 GZMBP10144 247 aa7.91□□□□□ -1.14
GTF3C1-204ENST00000564664 GAGE6Q13070 117 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms