RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 G3V3Q6 166 aa10.71□□□□□ -0.69
AC004449.1-201ENST00000564240 H2AFB1P0C5Y9 115 aa10.71□□□□□ -0.69
AC004449.1-201ENST00000564240 ATRAIDQ6UW56 229 aa10.71□□□□□ -0.69
AC004449.1-201ENST00000564240 TPPP3Q9BW30 176 aa10.71□□□□□ -0.69
AC004449.1-201ENST00000564240 MYCBP2O75592 4640 aa10.7□□□□□ -0.7
AC004449.1-201ENST00000564240 KANTRA0A1W2PQU2 76 aa10.7□□□□□ -0.7
AC004449.1-201ENST00000564240 USP17L23D6RBM5 183 aa10.7□□□□□ -0.7
AC004449.1-201ENST00000564240 IGLV2-8P01709 118 aa10.7□□□□□ -0.7
AC004449.1-201ENST00000564240 CXCL1P09341 107 aa10.7□□□□□ -0.7
AC004449.1-201ENST00000564240 GAGE6Q13070 117 aa10.7□□□□□ -0.7
AC004449.1-201ENST00000564240 DAZAP1Q96EP5 407 aaKnown RBP10.7□□□□□ -0.7
AC004449.1-201ENST00000564240 DERL1Q9BUN8 251 aa10.7□□□□□ -0.7
AC004449.1-201ENST00000564240 SNAI2O43623 268 aa10.69□□□□□ -0.7
AC004449.1-201ENST00000564240 MGPP08493 103 aa10.69□□□□□ -0.7
AC004449.1-201ENST00000564240 MIAQ16674 131 aa10.69□□□□□ -0.7
AC004449.1-201ENST00000564240 CLPSL2Q6UWE3 100 aa10.69□□□□□ -0.7
AC004449.1-201ENST00000564240 TRBV25-1A0A075B6N4 114 aa10.68□□□□□ -0.7
AC004449.1-201ENST00000564240 A0A0D9SG52 128 aa10.68□□□□□ -0.7
AC004449.1-201ENST00000564240 OR5AL1P0C617 328 aa10.68□□□□□ -0.7
AC004449.1-201ENST00000564240 EIF5AP63241 154 aaKnown RBP10.68□□□□□ -0.7
AC004449.1-201ENST00000564240 AP1S3Q96PC3 154 aa10.68□□□□□ -0.7
AC004449.1-201ENST00000564240 MLST8Q9BVC4 326 aa10.68□□□□□ -0.7
AC004449.1-201ENST00000564240 SSBP4Q9BWG4 385 aaPredicted RBP10.68□□□□□ -0.7
AC004449.1-201ENST00000564240 LINC00269Q8N2A0 174 aa10.67□□□□□ -0.7
AC004449.1-201ENST00000564240 RPL35P42766 123 aaKnown RBP10.66□□□□□ -0.7
AC004449.1-201ENST00000564240 RBX1P62877 108 aa10.66□□□□□ -0.7
AC004449.1-201ENST00000564240 ZNF345Q14585 488 aa10.66□□□□□ -0.7
AC004449.1-201ENST00000564240 NTM-AS1Q6ZSK4 140 aa10.66□□□□□ -0.7
AC004449.1-201ENST00000564240 GNG13Q9P2W3 67 aa10.66□□□□□ -0.7
AC004449.1-201ENST00000564240 H7C1H1 209 aa10.65□□□□□ -0.7
AC004449.1-201ENST00000564240 BCL2L11O43521 198 aa10.65□□□□□ -0.7
AC004449.1-201ENST00000564240 PRSS1P07477 247 aa10.65□□□□□ -0.7
AC004449.1-201ENST00000564240 RPL37AP61513 92 aaKnown RBP10.65□□□□□ -0.7
AC004449.1-201ENST00000564240 DGAT2L7PQ6IED9 249 aa10.65□□□□□ -0.7
AC004449.1-201ENST00000564240 OR2D3Q8NGH3 330 aa10.65□□□□□ -0.7
AC004449.1-201ENST00000564240 DPH3Q96FX2 82 aa10.65□□□□□ -0.7
AC004449.1-201ENST00000564240 IGHV1-24A0A0C4DH33 117 aa10.64□□□□□ -0.71
AC004449.1-201ENST00000564240 HMSDA8MTL9 139 aa10.64□□□□□ -0.71
AC004449.1-201ENST00000564240 GZMBP10144 247 aa10.64□□□□□ -0.71
AC004449.1-201ENST00000564240 RPS20P60866 119 aaKnown RBP10.64□□□□□ -0.71
AC004449.1-201ENST00000564240 SERTAD4-AS1Q5TG53 156 aa10.64□□□□□ -0.71
AC004449.1-201ENST00000564240 FER1L6-AS1Q8NA97 138 aa10.64□□□□□ -0.71
AC004449.1-201ENST00000564240 VAX2Q9UIW0 290 aa10.64□□□□□ -0.71
AC004449.1-201ENST00000564240 IGLV10-54A0A075B6I4 117 aa10.63□□□□□ -0.71
AC004449.1-201ENST00000564240 TEX46H3BTG2 121 aa10.63□□□□□ -0.71
AC004449.1-201ENST00000564240 OXTP01178 125 aa10.63□□□□□ -0.71
AC004449.1-201ENST00000564240 MANBALQ9NQG1 85 aa10.63□□□□□ -0.71
AC004449.1-201ENST00000564240 KIF25-AS1Q9Y6Z4 181 aa10.63□□□□□ -0.71
AC004449.1-201ENST00000564240 XKRY2A2RUG3 117 aa10.62□□□□□ -0.71
AC004449.1-201ENST00000564240 CACNG7P62955 275 aa10.62□□□□□ -0.71
AC004449.1-201ENST00000564240 CCL20P78556 96 aa10.62□□□□□ -0.71
AC004449.1-201ENST00000564240 RAB5CP51148 216 aa10.61□□□□□ -0.71
AC004449.1-201ENST00000564240 NKX2-5P52952 324 aaPredicted RBP10.61□□□□□ -0.71
AC004449.1-201ENST00000564240 REG3AQ06141 175 aa10.61□□□□□ -0.71
AC004449.1-201ENST00000564240 CENPWQ5EE01 88 aa10.61□□□□□ -0.71
AC004449.1-201ENST00000564240 C9orf163Q8N9P6 203 aa10.61□□□□□ -0.71
AC004449.1-201ENST00000564240 CLRN3Q8NCR9 226 aa10.61□□□□□ -0.71
AC004449.1-201ENST00000564240 PRR34Q9NV39 138 aa10.61□□□□□ -0.71
AC004449.1-201ENST00000564240 hDV102S1A0JD36 115 aa10.6□□□□□ -0.71
AC004449.1-201ENST00000564240 RAB19A4D1S5 217 aa10.6□□□□□ -0.71
AC004449.1-201ENST00000564240 M0QY20 66 aa10.6□□□□□ -0.71
AC004449.1-201ENST00000564240 UBE2L6O14933 153 aa10.6□□□□□ -0.71
AC004449.1-201ENST00000564240 GNG4P50150 75 aa10.6□□□□□ -0.71
AC004449.1-201ENST00000564240 IQCJQ1A5X6 159 aa10.6□□□□□ -0.71
AC004449.1-201ENST00000564240 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
AC004449.1-201ENST00000564240 TMEM243Q9BU79 118 aa10.6□□□□□ -0.71
AC004449.1-201ENST00000564240 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
AC004449.1-201ENST00000564240 IFNA1P01562 189 aa10.59□□□□□ -0.71
AC004449.1-201ENST00000564240 P01737 135 aa10.59□□□□□ -0.71
AC004449.1-201ENST00000564240 TRGC1P0CF51 173 aa10.59□□□□□ -0.71
AC004449.1-201ENST00000564240 KRTAP10-4P60372 401 aaPredicted RBP10.59□□□□□ -0.71
AC004449.1-201ENST00000564240 RASL11AQ6T310 242 aa10.59□□□□□ -0.71
AC004449.1-201ENST00000564240 MED9Q9NWA0 146 aa10.59□□□□□ -0.71
AC004449.1-201ENST00000564240 TRAV8-4A0A0B4J246 113 aa10.58□□□□□ -0.72
AC004449.1-201ENST00000564240 F2Z2F3 143 aa10.58□□□□□ -0.72
AC004449.1-201ENST00000564240 IGLC6P0CF74 106 aa10.58□□□□□ -0.72
AC004449.1-201ENST00000564240 EIF5AL1Q6IS14 154 aaKnown RBP10.58□□□□□ -0.72
AC004449.1-201ENST00000564240 C11orf52Q96A22 123 aa10.58□□□□□ -0.72
AC004449.1-201ENST00000564240 BIN3Q9NQY0 253 aa10.58□□□□□ -0.72
AC004449.1-201ENST00000564240 SULT1A2P50226 295 aa10.57□□□□□ -0.72
AC004449.1-201ENST00000564240 LYZL1Q6UWQ5 148 aa10.57□□□□□ -0.72
AC004449.1-201ENST00000564240 DPH3P1Q9H4G8 78 aa10.57□□□□□ -0.72
AC004449.1-201ENST00000564240 NIT2Q9NQR4 276 aa10.57□□□□□ -0.72
AC004449.1-201ENST00000564240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.57□□□□□ -0.72
AC004449.1-201ENST00000564240 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.56□□□□□ -0.72
AC004449.1-201ENST00000564240 NTF3P20783 257 aa10.56□□□□□ -0.72
AC004449.1-201ENST00000564240 COTL1Q14019 142 aa10.56□□□□□ -0.72
AC004449.1-201ENST00000564240 KRTAP26-1Q6PEX3 210 aa10.56□□□□□ -0.72
AC004449.1-201ENST00000564240 C20orf203Q8NBC4 194 aa10.56□□□□□ -0.72
AC004449.1-201ENST00000564240 IGLV4-60A0A075B6I1 120 aa10.55□□□□□ -0.72
AC004449.1-201ENST00000564240 IGHV3-64A0A075B6Q5 118 aa10.55□□□□□ -0.72
AC004449.1-201ENST00000564240 TRAV1-1A0A0B4J248 108 aa10.55□□□□□ -0.72
AC004449.1-201ENST00000564240 IGKV3OR2-268A0A0C4DH90 116 aa10.55□□□□□ -0.72
AC004449.1-201ENST00000564240 C19orf71A6NCJ1 209 aa10.55□□□□□ -0.72
AC004449.1-201ENST00000564240 PDE6DO43924 150 aa10.55□□□□□ -0.72
AC004449.1-201ENST00000564240 AMTP48728 403 aa10.55□□□□□ -0.72
AC004449.1-201ENST00000564240 TWIST1Q15672 202 aa10.55□□□□□ -0.72
AC004449.1-201ENST00000564240 WDR73Q6P4I2 378 aa10.55□□□□□ -0.72
AC004449.1-201ENST00000564240 SDIM1Q6ZPB5 146 aa10.55□□□□□ -0.72
AC004449.1-201ENST00000564240 A0A1B0GUV1 79 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms