RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 SPANXN1Q5VSR9 72 aa12.02□□□□□ -0.49
E4F1-203ENST00000563643 FER1L6-AS1Q8NA97 138 aa12.02□□□□□ -0.49
E4F1-203ENST00000563643 NUDT10Q8NFP7 164 aa12.02□□□□□ -0.49
E4F1-203ENST00000563643 NUDT11Q96G61 164 aa12.02□□□□□ -0.49
E4F1-203ENST00000563643 GZMBP10144 247 aa12.01□□□□□ -0.49
E4F1-203ENST00000563643 SMIM7Q9BQ49 75 aa12.01□□□□□ -0.49
E4F1-203ENST00000563643 MUC21A0A0G2JKD1 596 aa12□□□□□ -0.49
E4F1-203ENST00000563643 MUC21A0A140T8X8 626 aa12□□□□□ -0.49
E4F1-203ENST00000563643 WFDC10BQ8IUB3 73 aa12□□□□□ -0.49
E4F1-203ENST00000563643 RPP21Q9H633 154 aaKnown RBP12□□□□□ -0.49
E4F1-203ENST00000563643 F2Z2F3 143 aa11.99□□□□□ -0.49
E4F1-203ENST00000563643 LINC00694P0DN24 101 aa11.99□□□□□ -0.49
E4F1-203ENST00000563643 C14orf178Q8N769 122 aaPredicted RBP11.99□□□□□ -0.49
E4F1-203ENST00000563643 RNASE7Q9H1E1 156 aaKnown RBP11.99□□□□□ -0.49
E4F1-203ENST00000563643 ZNF727A8MUV8 499 aa11.98□□□□□ -0.49
E4F1-203ENST00000563643 FAM231DQ6ZW35 169 aa11.98□□□□□ -0.49
E4F1-203ENST00000563643 TPPP3Q9BW30 176 aa11.98□□□□□ -0.49
E4F1-203ENST00000563643 CTRLP40313 264 aa11.97□□□□□ -0.49
E4F1-203ENST00000563643 CACNG7P62955 275 aa11.97□□□□□ -0.49
E4F1-203ENST00000563643 PEA15Q15121 130 aa11.97□□□□□ -0.49
E4F1-203ENST00000563643 ATP6V0E2Q8NHE4 81 aa11.97□□□□□ -0.49
E4F1-203ENST00000563643 AP1S3Q96PC3 154 aa11.97□□□□□ -0.49
E4F1-203ENST00000563643 SMDT1Q9H4I9 107 aa11.97□□□□□ -0.49
E4F1-203ENST00000563643 TRBV10-1A0A0K0K1A3 114 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 GAGE12JA6NER3 117 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 RAB4BP61018 213 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 SSTP61278 116 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 GAGE1Q13065 139 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 GAGE4Q13068 117 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 GAGE5Q13069 117 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 GAGE13Q4V321 117 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 FAM74A3Q4VXF1 159 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 LYZL1Q6UWQ5 148 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 LINC01551Q86U37 167 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 C10orf126Q8N4M7 172 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 GTSF1LQ9H1H1 148 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 Q9UF83 564 aa11.96□□□□□ -0.49
E4F1-203ENST00000563643 KRTAP9-6A0A140TA67 174 aa11.95□□□□□ -0.5
E4F1-203ENST00000563643 C9JQL5 133 aa11.95□□□□□ -0.5
E4F1-203ENST00000563643 WDR73Q6P4I2 378 aa11.95□□□□□ -0.5
E4F1-203ENST00000563643 KIF25-AS1Q9Y6Z4 181 aa11.95□□□□□ -0.5
E4F1-203ENST00000563643 GATCO43716 136 aaKnown RBP11.94□□□□□ -0.5
E4F1-203ENST00000563643 SMIM17P0DL12 118 aa11.94□□□□□ -0.5
E4F1-203ENST00000563643 HNRNPA3P51991 378 aaKnown RBP11.94□□□□□ -0.5
E4F1-203ENST00000563643 SRSF3P84103 164 aaKnown RBP11.94□□□□□ -0.5
E4F1-203ENST00000563643 ZNF56Q15929 161 aa11.94□□□□□ -0.5
E4F1-203ENST00000563643 CT83Q5H943 113 aa11.94□□□□□ -0.5
E4F1-203ENST00000563643 CNFNQ9BYD5 112 aa11.94□□□□□ -0.5
E4F1-203ENST00000563643 RAB14P61106 215 aa11.93□□□□□ -0.5
E4F1-203ENST00000563643 LELP1Q5T871 98 aa11.93□□□□□ -0.5
E4F1-203ENST00000563643 CHAC1Q9BUX1 264 aa11.93□□□□□ -0.5
E4F1-203ENST00000563643 TRAV8-6A0A0B4J262 113 aa11.92□□□□□ -0.5
E4F1-203ENST00000563643 A8MWL6 223 aa11.92□□□□□ -0.5
E4F1-203ENST00000563643 TRGC1P0CF51 173 aa11.92□□□□□ -0.5
E4F1-203ENST00000563643 RPL36AP83881 106 aaKnown RBP11.92□□□□□ -0.5
E4F1-203ENST00000563643 TMEM241Q24JQ0 296 aa11.92□□□□□ -0.5
E4F1-203ENST00000563643 OR10G8Q8NGN5 311 aa11.92□□□□□ -0.5
E4F1-203ENST00000563643 GTSF1Q8WW33 167 aa11.92□□□□□ -0.5
E4F1-203ENST00000563643 RPL36ALQ969Q0 106 aaKnown RBP11.92□□□□□ -0.5
E4F1-203ENST00000563643 OSTCQ9NRP0 149 aa11.92□□□□□ -0.5
E4F1-203ENST00000563643 TRBV7-3A0A075B6L6 115 aa11.91□□□□□ -0.5
E4F1-203ENST00000563643 F5H697 171 aa11.91□□□□□ -0.5
E4F1-203ENST00000563643 NTF3P20783 257 aa11.91□□□□□ -0.5
E4F1-203ENST00000563643 A0A087WWC5 75 aa11.9□□□□□ -0.5
E4F1-203ENST00000563643 IGHV3-38A0A0C4DH36 116 aa11.9□□□□□ -0.5
E4F1-203ENST00000563643 LINC01620Q4KN68 170 aa11.9□□□□□ -0.5
E4F1-203ENST00000563643 OR10J3Q5JRS4 329 aa11.9□□□□□ -0.5
E4F1-203ENST00000563643 CIRBP-AS1Q8TBR5 109 aa11.9□□□□□ -0.5
E4F1-203ENST00000563643 NAT8Q9UHE5 227 aa11.9□□□□□ -0.5
E4F1-203ENST00000563643 GAS8-AS1O95177 125 aa11.89□□□□□ -0.51
E4F1-203ENST00000563643 UBE2D3P61077 147 aa11.89□□□□□ -0.51
E4F1-203ENST00000563643 RPL23P62829 140 aaKnown RBP11.89□□□□□ -0.51
E4F1-203ENST00000563643 UBE2D2P62837 147 aa11.89□□□□□ -0.51
E4F1-203ENST00000563643 LINC01556Q5JQF7 62 aa11.89□□□□□ -0.51
E4F1-203ENST00000563643 C15orf54Q8N8G6 183 aa11.89□□□□□ -0.51
E4F1-203ENST00000563643 NEXN-AS1Q8NBZ9 246 aa11.89□□□□□ -0.51
E4F1-203ENST00000563643 ISOC2Q96AB3 205 aa11.89□□□□□ -0.51
E4F1-203ENST00000563643 Q9HAA7 133 aa11.89□□□□□ -0.51
E4F1-203ENST00000563643 MGPP08493 103 aa11.88□□□□□ -0.51
E4F1-203ENST00000563643 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
E4F1-203ENST00000563643 WFDC2Q14508 124 aa11.88□□□□□ -0.51
E4F1-203ENST00000563643 TWIST1Q15672 202 aa11.88□□□□□ -0.51
E4F1-203ENST00000563643 TSKUQ8WUA8 353 aa11.88□□□□□ -0.51
E4F1-203ENST00000563643 GFRA4Q9GZZ7 299 aa11.88□□□□□ -0.51
E4F1-203ENST00000563643 DPH3P1Q9H4G8 78 aa11.88□□□□□ -0.51
E4F1-203ENST00000563643 FAM231BA6NCW3 169 aa11.87□□□□□ -0.51
E4F1-203ENST00000563643 RPL37AP61513 92 aaKnown RBP11.87□□□□□ -0.51
E4F1-203ENST00000563643 ADIRFQ15847 76 aa11.87□□□□□ -0.51
E4F1-203ENST00000563643 CLLU1Q5K131 121 aa11.87□□□□□ -0.51
E4F1-203ENST00000563643 H7C1H1 209 aa11.86□□□□□ -0.51
E4F1-203ENST00000563643 M0QY20 66 aa11.86□□□□□ -0.51
E4F1-203ENST00000563643 SUMO4Q6EEV6 95 aa11.86□□□□□ -0.51
E4F1-203ENST00000563643 PGLYRP4Q96LB8 373 aa11.86□□□□□ -0.51
E4F1-203ENST00000563643 V9GYV3 84 aa11.86□□□□□ -0.51
E4F1-203ENST00000563643 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.85□□□□□ -0.51
E4F1-203ENST00000563643 HIGD1CA8MV81 97 aa11.85□□□□□ -0.51
E4F1-203ENST00000563643 IBA57-AS1B1ANH7 110 aa11.85□□□□□ -0.51
E4F1-203ENST00000563643 IFITM2Q01629 132 aa11.85□□□□□ -0.51
E4F1-203ENST00000563643 SMIM15Q7Z3B0 74 aa11.84□□□□□ -0.51
E4F1-203ENST00000563643 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms