RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 WDR73Q6P4I2 378 aa13.47□□□□□ -0.25
TSPAN3-210ENST00000561277 Q8N3U1 123 aa13.47□□□□□ -0.25
TSPAN3-210ENST00000561277 RPL23P62829 140 aaKnown RBP13.46□□□□□ -0.25
TSPAN3-210ENST00000561277 ADIRFQ15847 76 aa13.46□□□□□ -0.25
TSPAN3-210ENST00000561277 Q6ZRN7 208 aaPredicted RBP13.46□□□□□ -0.25
TSPAN3-210ENST00000561277 SMDT1Q9H4I9 107 aa13.46□□□□□ -0.25
TSPAN3-210ENST00000561277 OSTCQ9NRP0 149 aa13.46□□□□□ -0.25
TSPAN3-210ENST00000561277 NFE4Q86UQ8 179 aa13.45□□□□□ -0.26
TSPAN3-210ENST00000561277 ISOC2Q96AB3 205 aa13.45□□□□□ -0.26
TSPAN3-210ENST00000561277 NAT8Q9UHE5 227 aa13.45□□□□□ -0.26
TSPAN3-210ENST00000561277 C15orf54Q8N8G6 183 aa13.45□□□□□ -0.26
TSPAN3-210ENST00000561277 H7C1H1 209 aa13.44□□□□□ -0.26
TSPAN3-210ENST00000561277 M0QY20 66 aa13.44□□□□□ -0.26
TSPAN3-210ENST00000561277 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.44□□□□□ -0.26
TSPAN3-210ENST00000561277 TSKUQ8WUA8 353 aa13.44□□□□□ -0.26
TSPAN3-210ENST00000561277 HIGD1CA8MV81 97 aa13.43□□□□□ -0.26
TSPAN3-210ENST00000561277 BORCS7Q96B45 105 aa13.43□□□□□ -0.26
TSPAN3-210ENST00000561277 Q9HAA7 133 aa13.43□□□□□ -0.26
TSPAN3-210ENST00000561277 V9GYV3 84 aa13.43□□□□□ -0.26
TSPAN3-210ENST00000561277 SMIM15Q7Z3B0 74 aa13.42□□□□□ -0.26
TSPAN3-210ENST00000561277 IBA57-AS1B1ANH7 110 aa13.41□□□□□ -0.26
TSPAN3-210ENST00000561277 FOXA3P55318 350 aaPredicted RBP13.41□□□□□ -0.26
TSPAN3-210ENST00000561277 RASL11AQ6T310 242 aa13.41□□□□□ -0.26
TSPAN3-210ENST00000561277 GFRA4Q9GZZ7 299 aa13.41□□□□□ -0.26
TSPAN3-210ENST00000561277 URGCP-MRPS24S4R325 110 aa13.41□□□□□ -0.26
TSPAN3-210ENST00000561277 TRBV6-8A0A0A6YYG3 113 aa13.41□□□□□ -0.26
TSPAN3-210ENST00000561277 DAZ4Q86SG3 579 aaKnown RBP13.41□□□□□ -0.26
TSPAN3-210ENST00000561277 NIT1Q86X76 327 aa13.41□□□□□ -0.26
TSPAN3-210ENST00000561277 DAZ3Q9NR90 486 aaKnown RBP13.41□□□□□ -0.26
TSPAN3-210ENST00000561277 DNAH11Q96DT5 4516 aa13.4□□□□□ -0.26
TSPAN3-210ENST00000561277 TRAV26-2A0A0B4J265 109 aa13.4□□□□□ -0.26
TSPAN3-210ENST00000561277 DNAJC30Q96LL9 226 aa13.4□□□□□ -0.26
TSPAN3-210ENST00000561277 A0A087WX48 190 aa13.38□□□□□ -0.27
TSPAN3-210ENST00000561277 A0A1B0GUT8 65 aa13.38□□□□□ -0.27
TSPAN3-210ENST00000561277 FAM231BA6NCW3 169 aa13.38□□□□□ -0.27
TSPAN3-210ENST00000561277 IFITM2Q01629 132 aa13.38□□□□□ -0.27
TSPAN3-210ENST00000561277 CLLU1Q5K131 121 aa13.38□□□□□ -0.27
TSPAN3-210ENST00000561277 SPATA12Q7Z6I5 190 aa13.38□□□□□ -0.27
TSPAN3-210ENST00000561277 GATD1Q8NB37 220 aa13.37□□□□□ -0.27
TSPAN3-210ENST00000561277 NIT2Q9NQR4 276 aa13.37□□□□□ -0.27
TSPAN3-210ENST00000561277 TMEM262E9PQX1 116 aa13.37□□□□□ -0.27
TSPAN3-210ENST00000561277 PSCAO43653 123 aa13.37□□□□□ -0.27
TSPAN3-210ENST00000561277 LAGE3Q14657 143 aa13.37□□□□□ -0.27
TSPAN3-210ENST00000561277 KCNIP4Q6PIL6 250 aa13.37□□□□□ -0.27
TSPAN3-210ENST00000561277 NTM-AS1Q6ZSK4 140 aa13.37□□□□□ -0.27
TSPAN3-210ENST00000561277 CHCHD5Q9BSY4 110 aa13.37□□□□□ -0.27
TSPAN3-210ENST00000561277 TMEM97Q5BJF2 176 aa13.36□□□□□ -0.27
TSPAN3-210ENST00000561277 NUP35Q8NFH5 326 aa13.36□□□□□ -0.27
TSPAN3-210ENST00000561277 DYNC1H1Q14204 4646 aaKnown RBP13.35□□□□□ -0.27
TSPAN3-210ENST00000561277 C16orf90A8MZG2 172 aa13.35□□□□□ -0.27
TSPAN3-210ENST00000561277 DEFB104AQ8WTQ1 72 aa13.35□□□□□ -0.27
TSPAN3-210ENST00000561277 NAT8BQ9UHF3 227 aa13.35□□□□□ -0.27
TSPAN3-210ENST00000561277 KLK12Q9UKR0 248 aa13.35□□□□□ -0.27
TSPAN3-210ENST00000561277 RPL39LQ96EH5 51 aaKnown RBP13.34□□□□□ -0.27
TSPAN3-210ENST00000561277 TRBV25-1A0A075B6N4 114 aa13.33□□□□□ -0.28
TSPAN3-210ENST00000561277 A0A087WTM6 91 aa13.33□□□□□ -0.28
TSPAN3-210ENST00000561277 EREGO14944 169 aa13.33□□□□□ -0.28
TSPAN3-210ENST00000561277 KRTAP10-2P60368 255 aa13.33□□□□□ -0.28
TSPAN3-210ENST00000561277 RIGQ13278 110 aa13.33□□□□□ -0.28
TSPAN3-210ENST00000561277 CHCHD7Q9BUK0 85 aa13.33□□□□□ -0.28
TSPAN3-210ENST00000561277 TRAV8-3A0A0A6YYJ7 113 aa13.32□□□□□ -0.28
TSPAN3-210ENST00000561277 MPV17L2Q567V2 206 aa13.32□□□□□ -0.28
TSPAN3-210ENST00000561277 IGHV1-24A0A0C4DH33 117 aa13.32□□□□□ -0.28
TSPAN3-210ENST00000561277 SMIM27A0A1W2PRY6 76 aa13.32□□□□□ -0.28
TSPAN3-210ENST00000561277 UBE2WQ96B02 151 aa13.32□□□□□ -0.28
TSPAN3-210ENST00000561277 TMEM191AQ9H0A3 160 aa13.32□□□□□ -0.28
TSPAN3-210ENST00000561277 KIAA1109Q2LD37 5005 aa13.31□□□□□ -0.28
TSPAN3-210ENST00000561277 GAGE6Q13070 117 aa13.31□□□□□ -0.28
TSPAN3-210ENST00000561277 IQCJQ1A5X6 159 aa13.31□□□□□ -0.28
TSPAN3-210ENST00000561277 AMN1Q8IY45 258 aa13.31□□□□□ -0.28
TSPAN3-210ENST00000561277 Q8N976 141 aa13.31□□□□□ -0.28
TSPAN3-210ENST00000561277 FRZBQ92765 325 aa13.31□□□□□ -0.28
TSPAN3-210ENST00000561277 FUSP35637 526 aaKnown RBP eCLIP13.3□□□□□ -0.283e-6■□□□□ 10.8
TSPAN3-210ENST00000561277 ELOBQ15370 118 aa13.3□□□□□ -0.28
TSPAN3-210ENST00000561277 ANGP03950 147 aaKnown RBP13.29□□□□□ -0.28
TSPAN3-210ENST00000561277 PKIAP61925 76 aa13.29□□□□□ -0.28
TSPAN3-210ENST00000561277 COTL1Q14019 142 aa13.29□□□□□ -0.28
TSPAN3-210ENST00000561277 TM2D2Q9BX73 214 aa13.29□□□□□ -0.28
TSPAN3-210ENST00000561277 GAS8-AS1O95177 125 aa13.28□□□□□ -0.28
TSPAN3-210ENST00000561277 RNF185Q96GF1 192 aa13.28□□□□□ -0.28
TSPAN3-210ENST00000561277 RAB4AP20338 218 aa13.28□□□□□ -0.28
TSPAN3-210ENST00000561277 CAMPP49913 170 aa13.28□□□□□ -0.28
TSPAN3-210ENST00000561277 PNRC1Q12796 327 aaPredicted RBP13.28□□□□□ -0.28
TSPAN3-210ENST00000561277 ATRAIDQ6UW56 229 aa13.28□□□□□ -0.28
TSPAN3-210ENST00000561277 TMEM243Q9BU79 118 aa13.28□□□□□ -0.28
TSPAN3-210ENST00000561277 IGKV2D-24A0A075B6R9 120 aa13.27□□□□□ -0.29
TSPAN3-210ENST00000561277 AMTP48728 403 aa13.27□□□□□ -0.29
TSPAN3-210ENST00000561277 RBX1P62877 108 aa13.27□□□□□ -0.29
TSPAN3-210ENST00000561277 LRCOL1A6NCL2 159 aa13.26□□□□□ -0.29
TSPAN3-210ENST00000561277 SDHAF1A6NFY7 115 aa13.26□□□□□ -0.29
TSPAN3-210ENST00000561277 CRPP02741 224 aa13.26□□□□□ -0.29
TSPAN3-210ENST00000561277 MRPL54Q6P161 138 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-210ENST00000561277 PPP1R2P9O14990 202 aa13.25□□□□□ -0.29
TSPAN3-210ENST00000561277 NCR2O95944 276 aa13.25□□□□□ -0.29
TSPAN3-210ENST00000561277 RMI2Q96E14 147 aa13.25□□□□□ -0.29
TSPAN3-210ENST00000561277 MRAP2Q96G30 205 aa13.25□□□□□ -0.29
TSPAN3-210ENST00000561277 SMKR1H3BMG3 65 aa13.24□□□□□ -0.29
TSPAN3-210ENST00000561277 CLPSL2Q6UWE3 100 aa13.24□□□□□ -0.29
TSPAN3-210ENST00000561277 UBE2L6O14933 153 aa13.24□□□□□ -0.29
TSPAN3-210ENST00000561277 RPS10P46783 165 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 442.3 ms