RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 KIF25-AS1Q9Y6Z4 181 aa8.73□□□□□ -1.01
CTDSPL2-209ENST00000560620 LAGE3Q14657 143 aa8.72□□□□□ -1.01
CTDSPL2-209ENST00000560620 TEX261Q6UWH6 196 aa8.72□□□□□ -1.01
CTDSPL2-209ENST00000560620 DPH3P1Q9H4G8 78 aa8.72□□□□□ -1.01
CTDSPL2-209ENST00000560620 A0A087WTM6 91 aa8.71□□□□□ -1.02
CTDSPL2-209ENST00000560620 TRBV6-8A0A0A6YYG3 113 aa8.71□□□□□ -1.02
CTDSPL2-209ENST00000560620 TRAV8-3A0A0A6YYJ7 113 aa8.71□□□□□ -1.02
CTDSPL2-209ENST00000560620 FUSP35637 526 aaKnown RBP eCLIP8.71□□□□□ -1.02
CTDSPL2-209ENST00000560620 CTRLP40313 264 aa8.71□□□□□ -1.02
CTDSPL2-209ENST00000560620 SUMO4Q6EEV6 95 aa8.71□□□□□ -1.02
CTDSPL2-209ENST00000560620 SMIM15Q7Z3B0 74 aa8.71□□□□□ -1.02
CTDSPL2-209ENST00000560620 NIT1Q86X76 327 aa8.71□□□□□ -1.02
CTDSPL2-209ENST00000560620 PGPEP1Q9NXJ5 209 aa8.71□□□□□ -1.02
CTDSPL2-209ENST00000560620 A8MWL6 223 aa8.7□□□□□ -1.02
CTDSPL2-209ENST00000560620 SRP19P09132 144 aaKnown RBP8.7□□□□□ -1.02
CTDSPL2-209ENST00000560620 FAM231DQ6ZW35 169 aa8.7□□□□□ -1.02
CTDSPL2-209ENST00000560620 BORCS7Q96B45 105 aa8.7□□□□□ -1.02
CTDSPL2-209ENST00000560620 PGLYRP4Q96LB8 373 aa8.7□□□□□ -1.02
CTDSPL2-209ENST00000560620 CHCHD5Q9BSY4 110 aa8.7□□□□□ -1.02
CTDSPL2-209ENST00000560620 TM2D2Q9BX73 214 aa8.7□□□□□ -1.02
CTDSPL2-209ENST00000560620 KLK12Q9UKR0 248 aa8.7□□□□□ -1.02
CTDSPL2-209ENST00000560620 M0QY20 66 aa8.69□□□□□ -1.02
CTDSPL2-209ENST00000560620 ELOBQ15370 118 aa8.69□□□□□ -1.02
CTDSPL2-209ENST00000560620 TMEM97Q5BJF2 176 aa8.69□□□□□ -1.02
CTDSPL2-209ENST00000560620 WDR73Q6P4I2 378 aa8.69□□□□□ -1.02
CTDSPL2-209ENST00000560620 RASL11AQ6T310 242 aa8.69□□□□□ -1.02
CTDSPL2-209ENST00000560620 LINC01551Q86U37 167 aa8.69□□□□□ -1.02
CTDSPL2-209ENST00000560620 DNAJC30Q96LL9 226 aa8.69□□□□□ -1.02
CTDSPL2-209ENST00000560620 HERC2O95714 4834 aa8.69□□□□□ -1.02
CTDSPL2-209ENST00000560620 TRBV25-1A0A075B6N4 114 aa8.68□□□□□ -1.02
CTDSPL2-209ENST00000560620 NDUFS6O75380 124 aaKnown RBP8.68□□□□□ -1.02
CTDSPL2-209ENST00000560620 PEA15Q15121 130 aa8.68□□□□□ -1.02
CTDSPL2-209ENST00000560620 C15orf54Q8N8G6 183 aa8.68□□□□□ -1.02
CTDSPL2-209ENST00000560620 GTSF1Q8WW33 167 aa8.68□□□□□ -1.02
CTDSPL2-209ENST00000560620 UBE2WQ96B02 151 aa8.68□□□□□ -1.02
CTDSPL2-209ENST00000560620 RMI2Q96E14 147 aa8.68□□□□□ -1.02
CTDSPL2-209ENST00000560620 CHCHD7Q9BUK0 85 aa8.68□□□□□ -1.02
CTDSPL2-209ENST00000560620 DNAH11Q96DT5 4516 aa8.68□□□□□ -1.02
CTDSPL2-209ENST00000560620 DYNC1H1Q14204 4646 aaKnown RBP8.68□□□□□ -1.02
CTDSPL2-209ENST00000560620 IGKV2D-24A0A075B6R9 120 aa8.67□□□□□ -1.02
CTDSPL2-209ENST00000560620 ANGP03950 147 aaKnown RBP8.67□□□□□ -1.02
CTDSPL2-209ENST00000560620 TMEM241Q24JQ0 296 aa8.67□□□□□ -1.02
CTDSPL2-209ENST00000560620 CDPF1Q6NVV7 123 aa8.67□□□□□ -1.02
CTDSPL2-209ENST00000560620 NIT2Q9NQR4 276 aa8.67□□□□□ -1.02
CTDSPL2-209ENST00000560620 TRAV26-2A0A0B4J265 109 aa8.66□□□□□ -1.02
CTDSPL2-209ENST00000560620 CRPP02741 224 aa8.66□□□□□ -1.02
CTDSPL2-209ENST00000560620 PKIAP61925 76 aa8.66□□□□□ -1.02
CTDSPL2-209ENST00000560620 ADIRFQ15847 76 aa8.66□□□□□ -1.02
CTDSPL2-209ENST00000560620 FAM74A3Q4VXF1 159 aa8.66□□□□□ -1.02
CTDSPL2-209ENST00000560620 MPV17L2Q567V2 206 aa8.66□□□□□ -1.02
CTDSPL2-209ENST00000560620 CT83Q5H943 113 aa8.66□□□□□ -1.02
CTDSPL2-209ENST00000560620 DEFB104AQ8WTQ1 72 aa8.66□□□□□ -1.02
CTDSPL2-209ENST00000560620 CNFNQ9BYD5 112 aa8.66□□□□□ -1.02
CTDSPL2-209ENST00000560620 COX11Q9Y6N1 276 aa8.66□□□□□ -1.02
CTDSPL2-209ENST00000560620 IGLV5-52A0A0A0MRZ9 124 aa8.65□□□□□ -1.02
CTDSPL2-209ENST00000560620 IGHV1-24A0A0C4DH33 117 aa8.65□□□□□ -1.02
CTDSPL2-209ENST00000560620 LECT2O14960 151 aa8.65□□□□□ -1.02
CTDSPL2-209ENST00000560620 CDK2AP2O75956 126 aa8.65□□□□□ -1.02
CTDSPL2-209ENST00000560620 GAGE6Q13070 117 aa8.65□□□□□ -1.02
CTDSPL2-209ENST00000560620 NTM-AS1Q6ZSK4 140 aa8.65□□□□□ -1.02
CTDSPL2-209ENST00000560620 TSKUQ8WUA8 353 aa8.65□□□□□ -1.02
CTDSPL2-209ENST00000560620 OSTCQ9NRP0 149 aa8.65□□□□□ -1.02
CTDSPL2-209ENST00000560620 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
CTDSPL2-209ENST00000560620 HIGD1CA8MV81 97 aa8.64□□□□□ -1.03
CTDSPL2-209ENST00000560620 FOXA3P55318 350 aaPredicted RBP8.64□□□□□ -1.03
CTDSPL2-209ENST00000560620 SRSF3P84103 164 aaKnown RBP8.64□□□□□ -1.03
CTDSPL2-209ENST00000560620 Q0VG73 95 aa8.64□□□□□ -1.03
CTDSPL2-209ENST00000560620 Q8N814 137 aa8.64□□□□□ -1.03
CTDSPL2-209ENST00000560620 Q8N976 141 aa8.64□□□□□ -1.03
CTDSPL2-209ENST00000560620 GATD1Q8NB37 220 aa8.64□□□□□ -1.03
CTDSPL2-209ENST00000560620 NAT8Q9UHE5 227 aa8.64□□□□□ -1.03
CTDSPL2-209ENST00000560620 A0A1B0GUT8 65 aa8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 C9JQL5 133 aa8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 GCSHP23434 173 aa8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 RAB14P61106 215 aa8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 RPL23P62829 140 aaKnown RBP8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 COTL1Q14019 142 aa8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 ATRAIDQ6UW56 229 aa8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 MAPKAPK5-AS1Q8N8E1 139 aa8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 BAALCQ8WXS3 180 aa8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 ISOC2Q96AB3 205 aa8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 C1orf43Q9BWL3 253 aa8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 GFRA4Q9GZZ7 299 aa8.63□□□□□ -1.03
CTDSPL2-209ENST00000560620 RYR1P21817 5038 aa8.62□□□□□ -1.03
CTDSPL2-209ENST00000560620 UBE2L6O14933 153 aa8.62□□□□□ -1.03
CTDSPL2-209ENST00000560620 AMTP48728 403 aa8.62□□□□□ -1.03
CTDSPL2-209ENST00000560620 IQCJQ1A5X6 159 aa8.62□□□□□ -1.03
CTDSPL2-209ENST00000560620 CLPSL2Q6UWE3 100 aa8.62□□□□□ -1.03
CTDSPL2-209ENST00000560620 NTN5Q8WTR8 489 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-209ENST00000560620 RPL39LQ96EH5 51 aaKnown RBP8.62□□□□□ -1.03
CTDSPL2-209ENST00000560620 TMEM243Q9BU79 118 aa8.62□□□□□ -1.03
CTDSPL2-209ENST00000560620 SMDT1Q9H4I9 107 aa8.62□□□□□ -1.03
CTDSPL2-209ENST00000560620 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-209ENST00000560620 FAM231BA6NCW3 169 aa8.61□□□□□ -1.03
CTDSPL2-209ENST00000560620 RBX1P62877 108 aa8.61□□□□□ -1.03
CTDSPL2-209ENST00000560620 FRZBQ92765 325 aa8.61□□□□□ -1.03
CTDSPL2-209ENST00000560620 V9GYV3 84 aa8.61□□□□□ -1.03
CTDSPL2-209ENST00000560620 RIGQ13278 110 aa8.6□□□□□ -1.03
CTDSPL2-209ENST00000560620 WFDC2Q14508 124 aa8.6□□□□□ -1.03
CTDSPL2-209ENST00000560620 ENHOQ6UWT2 76 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms