RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 SCO2A0A1W2PP80 73 aa12.08□□□□□ -0.48
TPM1-224ENST00000560615 RPL19P84098 196 aaKnown RBP12.08□□□□□ -0.48
TPM1-224ENST00000560615 DGAT2L7PQ6IED9 249 aa12.08□□□□□ -0.48
TPM1-224ENST00000560615 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.48
TPM1-224ENST00000560615 AP1S3Q96PC3 154 aa12.08□□□□□ -0.48
TPM1-224ENST00000560615 MLST8Q9BVC4 326 aa12.08□□□□□ -0.48
TPM1-224ENST00000560615 TRBV25-1A0A075B6N4 114 aa12.07□□□□□ -0.48
TPM1-224ENST00000560615 A0A0D9SG52 128 aa12.07□□□□□ -0.48
TPM1-224ENST00000560615 KANTRA0A1W2PQU2 76 aa12.07□□□□□ -0.48
TPM1-224ENST00000560615 G3V3Q6 166 aa12.07□□□□□ -0.48
TPM1-224ENST00000560615 HLA-DQA1P01909 254 aa12.07□□□□□ -0.48
TPM1-224ENST00000560615 H2AFB1P0C5Y9 115 aa12.07□□□□□ -0.48
TPM1-224ENST00000560615 SERTAD4-AS1Q5TG53 156 aa12.07□□□□□ -0.48
TPM1-224ENST00000560615 TMUB2Q71RG4 321 aa12.07□□□□□ -0.48
TPM1-224ENST00000560615 A0A1B0GV50 99 aa12.06□□□□□ -0.48
TPM1-224ENST00000560615 H7C1H1 209 aa12.06□□□□□ -0.48
TPM1-224ENST00000560615 OXTP01178 125 aa12.06□□□□□ -0.48
TPM1-224ENST00000560615 DAZAP1Q96EP5 407 aaKnown RBP12.06□□□□□ -0.48
TPM1-224ENST00000560615 DERL1Q9BUN8 251 aa12.06□□□□□ -0.48
TPM1-224ENST00000560615 VAX2Q9UIW0 290 aa12.06□□□□□ -0.48
TPM1-224ENST00000560615 USP17L23D6RBM5 183 aa12.05□□□□□ -0.48
TPM1-224ENST00000560615 SSTP61278 116 aa12.05□□□□□ -0.48
TPM1-224ENST00000560615 MUC21A0A0G2JKD1 596 aa12.04□□□□□ -0.48
TPM1-224ENST00000560615 MUC21A0A140T8X8 626 aa12.04□□□□□ -0.48
TPM1-224ENST00000560615 HMSDA8MTL9 139 aa12.04□□□□□ -0.48
TPM1-224ENST00000560615 TEX46H3BTG2 121 aa12.04□□□□□ -0.48
TPM1-224ENST00000560615 RPS20P60866 119 aaKnown RBP12.04□□□□□ -0.48
TPM1-224ENST00000560615 MANBALQ9NQG1 85 aa12.04□□□□□ -0.48
TPM1-224ENST00000560615 IGHV1-24A0A0C4DH33 117 aa12.03□□□□□ -0.48
TPM1-224ENST00000560615 XKRY2A2RUG3 117 aa12.03□□□□□ -0.48
TPM1-224ENST00000560615 CLRN3Q8NCR9 226 aa12.03□□□□□ -0.48
TPM1-224ENST00000560615 PRR34Q9NV39 138 aa12.03□□□□□ -0.48
TPM1-224ENST00000560615 BCL2L11O43521 198 aa12.02□□□□□ -0.49
TPM1-224ENST00000560615 RPL35P42766 123 aaKnown RBP12.02□□□□□ -0.49
TPM1-224ENST00000560615 RBX1P62877 108 aa12.02□□□□□ -0.49
TPM1-224ENST00000560615 GAGE6Q13070 117 aa12.02□□□□□ -0.49
TPM1-224ENST00000560615 LINC00269Q8N2A0 174 aa12.02□□□□□ -0.49
TPM1-224ENST00000560615 DNAH8Q96JB1 4490 aa12.01□□□□□ -0.49
TPM1-224ENST00000560615 SMLR1H3BR10 107 aa12.01□□□□□ -0.49
TPM1-224ENST00000560615 MGPP08493 103 aa12.01□□□□□ -0.49
TPM1-224ENST00000560615 RPL37AP61513 92 aaKnown RBP12.01□□□□□ -0.49
TPM1-224ENST00000560615 CACNG7P62955 275 aa12.01□□□□□ -0.49
TPM1-224ENST00000560615 IQCJQ1A5X6 159 aa12.01□□□□□ -0.49
TPM1-224ENST00000560615 NTM-AS1Q6ZSK4 140 aa12.01□□□□□ -0.49
TPM1-224ENST00000560615 FER1L6-AS1Q8NA97 138 aa12.01□□□□□ -0.49
TPM1-224ENST00000560615 TPPP3Q9BW30 176 aa12.01□□□□□ -0.49
TPM1-224ENST00000560615 PRSS1P07477 247 aa12□□□□□ -0.49
TPM1-224ENST00000560615 EIF5AL1Q6IS14 154 aaKnown RBP12□□□□□ -0.49
TPM1-224ENST00000560615 C9orf163Q8N9P6 203 aa12□□□□□ -0.49
TPM1-224ENST00000560615 BIN3Q9NQY0 253 aa12□□□□□ -0.49
TPM1-224ENST00000560615 KIF25-AS1Q9Y6Z4 181 aa12□□□□□ -0.49
TPM1-224ENST00000560615 TRAV8-4A0A0B4J246 113 aa11.99□□□□□ -0.49
TPM1-224ENST00000560615 F2Z2F3 143 aa11.99□□□□□ -0.49
TPM1-224ENST00000560615 P01737 135 aa11.99□□□□□ -0.49
TPM1-224ENST00000560615 OR2D3Q8NGH3 330 aa11.99□□□□□ -0.49
TPM1-224ENST00000560615 SMIM12Q96EX1 92 aa11.99□□□□□ -0.49
TPM1-224ENST00000560615 GNG13Q9P2W3 67 aa11.99□□□□□ -0.49
TPM1-224ENST00000560615 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
TPM1-224ENST00000560615 RAB5CP51148 216 aa11.98□□□□□ -0.49
TPM1-224ENST00000560615 REG3AQ06141 175 aa11.98□□□□□ -0.49
TPM1-224ENST00000560615 CLPSL2Q6UWE3 100 aa11.98□□□□□ -0.49
TPM1-224ENST00000560615 C11orf52Q96A22 123 aa11.98□□□□□ -0.49
TPM1-224ENST00000560615 AP5S1Q9NUS5 200 aa11.98□□□□□ -0.49
TPM1-224ENST00000560615 M0QY20 66 aa11.97□□□□□ -0.49
TPM1-224ENST00000560615 GZMBP10144 247 aa11.97□□□□□ -0.49
TPM1-224ENST00000560615 KRTAP10-4P60372 401 aaPredicted RBP11.97□□□□□ -0.49
TPM1-224ENST00000560615 CENPWQ5EE01 88 aa11.97□□□□□ -0.49
TPM1-224ENST00000560615 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.96□□□□□ -0.49
TPM1-224ENST00000560615 UBE2L6O14933 153 aa11.96□□□□□ -0.49
TPM1-224ENST00000560615 GNG4P50150 75 aa11.96□□□□□ -0.49
TPM1-224ENST00000560615 RASL11AQ6T310 242 aa11.96□□□□□ -0.49
TPM1-224ENST00000560615 TMEM243Q9BU79 118 aa11.96□□□□□ -0.49
TPM1-224ENST00000560615 TRAV1-1A0A0B4J248 108 aa11.95□□□□□ -0.5
TPM1-224ENST00000560615 A0A1B0GUV1 79 aa11.95□□□□□ -0.5
TPM1-224ENST00000560615 PDE6DO43924 150 aa11.95□□□□□ -0.5
TPM1-224ENST00000560615 IFNA1P01562 189 aa11.95□□□□□ -0.5
TPM1-224ENST00000560615 IGLC6P0CF74 106 aa11.95□□□□□ -0.5
TPM1-224ENST00000560615 CCL20P78556 96 aa11.95□□□□□ -0.5
TPM1-224ENST00000560615 SUMO4Q6EEV6 95 aa11.95□□□□□ -0.5
TPM1-224ENST00000560615 WDR73Q6P4I2 378 aa11.95□□□□□ -0.5
TPM1-224ENST00000560615 DPH3Q96FX2 82 aa11.95□□□□□ -0.5
TPM1-224ENST00000560615 NKX2-5P52952 324 aaPredicted RBP11.94□□□□□ -0.5
TPM1-224ENST00000560615 PGLYRP4Q96LB8 373 aa11.94□□□□□ -0.5
TPM1-224ENST00000560615 DPH3P1Q9H4G8 78 aa11.94□□□□□ -0.5
TPM1-224ENST00000560615 NIT2Q9NQR4 276 aa11.94□□□□□ -0.5
TPM1-224ENST00000560615 IGLV10-54A0A075B6I4 117 aa11.93□□□□□ -0.5
TPM1-224ENST00000560615 hDV102S1A0JD36 115 aa11.93□□□□□ -0.5
TPM1-224ENST00000560615 CNBPP62633 177 aaKnown RBP11.93□□□□□ -0.5
TPM1-224ENST00000560615 C19orf71A6NCJ1 209 aa11.92□□□□□ -0.5
TPM1-224ENST00000560615 COTL1Q14019 142 aa11.92□□□□□ -0.5
TPM1-224ENST00000560615 KRTAP26-1Q6PEX3 210 aa11.92□□□□□ -0.5
TPM1-224ENST00000560615 SDIM1Q6ZPB5 146 aa11.92□□□□□ -0.5
TPM1-224ENST00000560615 MED9Q9NWA0 146 aa11.92□□□□□ -0.5
TPM1-224ENST00000560615 IGHV3-64A0A075B6Q5 118 aa11.91□□□□□ -0.5
TPM1-224ENST00000560615 SULT1A2P50226 295 aa11.91□□□□□ -0.5
TPM1-224ENST00000560615 MEF2BQ02080 365 aaPredicted RBP11.91□□□□□ -0.5
TPM1-224ENST00000560615 CFAP161Q6P656 301 aa11.91□□□□□ -0.5
TPM1-224ENST00000560615 C20orf203Q8NBC4 194 aa11.91□□□□□ -0.5
TPM1-224ENST00000560615 NTF3P20783 257 aa11.9□□□□□ -0.5
TPM1-224ENST00000560615 AMTP48728 403 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms