RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 BAGE2Q86Y30 109 aa11.26□□□□□ -0.61
CRTC3-208ENST00000560098 SFT2D1Q8WV19 159 aa11.26□□□□□ -0.61
CRTC3-208ENST00000560098 PKHD1L1Q86WI1 4243 aa11.25□□□□□ -0.61
CRTC3-208ENST00000560098 MUC21A0A0G2JKD1 596 aa11.25□□□□□ -0.61
CRTC3-208ENST00000560098 MUC21A0A140T8X8 626 aa11.25□□□□□ -0.61
CRTC3-208ENST00000560098 SCO2A0A1W2PP80 73 aa11.25□□□□□ -0.61
CRTC3-208ENST00000560098 OR5AL1P0C617 328 aa11.25□□□□□ -0.61
CRTC3-208ENST00000560098 DGAT2L7PQ6IED9 249 aa11.25□□□□□ -0.61
CRTC3-208ENST00000560098 NTM-AS1Q6ZSK4 140 aa11.25□□□□□ -0.61
CRTC3-208ENST00000560098 VAX2Q9UIW0 290 aa11.25□□□□□ -0.61
CRTC3-208ENST00000560098 PRSS1P07477 247 aa11.24□□□□□ -0.61
CRTC3-208ENST00000560098 RPL37AP61513 92 aaKnown RBP11.24□□□□□ -0.61
CRTC3-208ENST00000560098 MBD3L1Q8WWY6 194 aa11.24□□□□□ -0.61
CRTC3-208ENST00000560098 PRR34Q9NV39 138 aa11.24□□□□□ -0.61
CRTC3-208ENST00000560098 A0A1B0GV50 99 aa11.23□□□□□ -0.61
CRTC3-208ENST00000560098 PFDN1O60925 122 aa11.23□□□□□ -0.61
CRTC3-208ENST00000560098 SSTP61278 116 aa11.23□□□□□ -0.61
CRTC3-208ENST00000560098 FAM213BQ8TBF2 198 aa11.23□□□□□ -0.61
CRTC3-208ENST00000560098 DERL1Q9BUN8 251 aa11.23□□□□□ -0.61
CRTC3-208ENST00000560098 KIF25-AS1Q9Y6Z4 181 aa11.23□□□□□ -0.61
CRTC3-208ENST00000560098 SMIM17P0DL12 118 aa11.22□□□□□ -0.61
CRTC3-208ENST00000560098 RBX1P62877 108 aa11.22□□□□□ -0.61
CRTC3-208ENST00000560098 CLPSL2Q6UWE3 100 aa11.22□□□□□ -0.61
CRTC3-208ENST00000560098 C9orf163Q8N9P6 203 aa11.22□□□□□ -0.61
CRTC3-208ENST00000560098 TRBV25-1A0A075B6N4 114 aa11.21□□□□□ -0.61
CRTC3-208ENST00000560098 UMAD1C9J7I0 102 aa11.21□□□□□ -0.61
CRTC3-208ENST00000560098 GAGE6Q13070 117 aa11.21□□□□□ -0.61
CRTC3-208ENST00000560098 KRTAP26-1Q6PEX3 210 aa11.21□□□□□ -0.61
CRTC3-208ENST00000560098 LINC00269Q8N2A0 174 aa11.21□□□□□ -0.61
CRTC3-208ENST00000560098 AP1S3Q96PC3 154 aa11.21□□□□□ -0.61
CRTC3-208ENST00000560098 SMLR1H3BR10 107 aa11.2□□□□□ -0.62
CRTC3-208ENST00000560098 TMUB2Q71RG4 321 aa11.2□□□□□ -0.62
CRTC3-208ENST00000560098 KCNRGQ8N5I3 272 aa11.2□□□□□ -0.62
CRTC3-208ENST00000560098 ZNF345Q14585 488 aa11.19□□□□□ -0.62
CRTC3-208ENST00000560098 IQCJQ1A5X6 159 aa11.19□□□□□ -0.62
CRTC3-208ENST00000560098 UBR4Q5T4S7 5183 aa11.19□□□□□ -0.62
CRTC3-208ENST00000560098 HNRNPA3P51991 378 aaKnown RBP11.18□□□□□ -0.62
CRTC3-208ENST00000560098 DAZAP1Q96EP5 407 aaKnown RBP11.18□□□□□ -0.62
CRTC3-208ENST00000560098 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.18□□□□□ -0.62
CRTC3-208ENST00000560098 IGHV1-24A0A0C4DH33 117 aa11.18□□□□□ -0.62
CRTC3-208ENST00000560098 H2AFB1P0C5Y9 115 aa11.18□□□□□ -0.62
CRTC3-208ENST00000560098 RPL35P42766 123 aaKnown RBP11.18□□□□□ -0.62
CRTC3-208ENST00000560098 SDIM1Q6ZPB5 146 aa11.18□□□□□ -0.62
CRTC3-208ENST00000560098 CLRN3Q8NCR9 226 aa11.18□□□□□ -0.62
CRTC3-208ENST00000560098 M0QY20 66 aa11.17□□□□□ -0.62
CRTC3-208ENST00000560098 REG3AQ06141 175 aa11.17□□□□□ -0.62
CRTC3-208ENST00000560098 RGS21Q2M5E4 152 aa11.17□□□□□ -0.62
CRTC3-208ENST00000560098 PLA2G2DQ9UNK4 145 aa11.17□□□□□ -0.62
CRTC3-208ENST00000560098 IGLV10-54A0A075B6I4 117 aa11.16□□□□□ -0.62
CRTC3-208ENST00000560098 H7C1H1 209 aa11.16□□□□□ -0.62
CRTC3-208ENST00000560098 PANO1I0J062 215 aa11.16□□□□□ -0.62
CRTC3-208ENST00000560098 MGPP08493 103 aa11.16□□□□□ -0.62
CRTC3-208ENST00000560098 TPPP3Q9BW30 176 aa11.16□□□□□ -0.62
CRTC3-208ENST00000560098 IGLC6P0CF74 106 aa11.15□□□□□ -0.62
CRTC3-208ENST00000560098 GZMBP10144 247 aa11.15□□□□□ -0.62
CRTC3-208ENST00000560098 TRAV8-4A0A0B4J246 113 aa11.14□□□□□ -0.63
CRTC3-208ENST00000560098 A0A0D9SG52 128 aa11.14□□□□□ -0.63
CRTC3-208ENST00000560098 HMSDA8MTL9 139 aa11.14□□□□□ -0.63
CRTC3-208ENST00000560098 BCL2L11O43521 198 aa11.14□□□□□ -0.63
CRTC3-208ENST00000560098 P01737 135 aa11.14□□□□□ -0.63
CRTC3-208ENST00000560098 CNBPP62633 177 aaKnown RBP11.14□□□□□ -0.63
CRTC3-208ENST00000560098 SUMO4Q6EEV6 95 aa11.14□□□□□ -0.63
CRTC3-208ENST00000560098 FER1L6-AS1Q8NA97 138 aa11.14□□□□□ -0.63
CRTC3-208ENST00000560098 C20orf203Q8NBC4 194 aa11.14□□□□□ -0.63
CRTC3-208ENST00000560098 KANTRA0A1W2PQU2 76 aa11.13□□□□□ -0.63
CRTC3-208ENST00000560098 hDV102S1A0JD36 115 aa11.13□□□□□ -0.63
CRTC3-208ENST00000560098 RPS20P60866 119 aaKnown RBP11.13□□□□□ -0.63
CRTC3-208ENST00000560098 C11orf52Q96A22 123 aa11.13□□□□□ -0.63
CRTC3-208ENST00000560098 MANBALQ9NQG1 85 aa11.13□□□□□ -0.63
CRTC3-208ENST00000560098 A0A1B0GUV1 79 aa11.12□□□□□ -0.63
CRTC3-208ENST00000560098 NKX2-5P52952 324 aaPredicted RBP11.12□□□□□ -0.63
CRTC3-208ENST00000560098 CACNG7P62955 275 aa11.12□□□□□ -0.63
CRTC3-208ENST00000560098 CENPWQ5EE01 88 aa11.12□□□□□ -0.63
CRTC3-208ENST00000560098 OR2D3Q8NGH3 330 aa11.12□□□□□ -0.63
CRTC3-208ENST00000560098 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
CRTC3-208ENST00000560098 GNG13Q9P2W3 67 aa11.12□□□□□ -0.63
CRTC3-208ENST00000560098 IGLV4-60A0A075B6I1 120 aa11.11□□□□□ -0.63
CRTC3-208ENST00000560098 EIF5AP63241 154 aaKnown RBP11.11□□□□□ -0.63
CRTC3-208ENST00000560098 CCL20P78556 96 aa11.11□□□□□ -0.63
CRTC3-208ENST00000560098 CIRBPQ14011 172 aaKnown RBP11.11□□□□□ -0.63
CRTC3-208ENST00000560098 C19orf71A6NCJ1 209 aa11.1□□□□□ -0.63
CRTC3-208ENST00000560098 RASL11AQ6T310 242 aa11.1□□□□□ -0.63
CRTC3-208ENST00000560098 AP5S1Q9NUS5 200 aa11.1□□□□□ -0.63
CRTC3-208ENST00000560098 IGHV3-64A0A075B6Q5 118 aa11.09□□□□□ -0.63
CRTC3-208ENST00000560098 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.09□□□□□ -0.63
CRTC3-208ENST00000560098 PGLYRP4Q96LB8 373 aa11.09□□□□□ -0.63
CRTC3-208ENST00000560098 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
CRTC3-208ENST00000560098 XKRY2A2RUG3 117 aa11.09□□□□□ -0.63
CRTC3-208ENST00000560098 F2Z2F3 143 aa11.09□□□□□ -0.63
CRTC3-208ENST00000560098 SLPIP03973 132 aa11.09□□□□□ -0.63
CRTC3-208ENST00000560098 TRGC1P0CF51 173 aa11.09□□□□□ -0.63
CRTC3-208ENST00000560098 RAB5CP51148 216 aa11.09□□□□□ -0.63
CRTC3-208ENST00000560098 Q6ZRU5 148 aa11.09□□□□□ -0.63
CRTC3-208ENST00000560098 SMIM12Q96EX1 92 aa11.09□□□□□ -0.63
CRTC3-208ENST00000560098 NIT2Q9NQR4 276 aa11.09□□□□□ -0.63
CRTC3-208ENST00000560098 TRAV1-1A0A0B4J248 108 aa11.08□□□□□ -0.64
CRTC3-208ENST00000560098 RAB19A4D1S5 217 aa11.08□□□□□ -0.64
CRTC3-208ENST00000560098 GNG4P50150 75 aa11.08□□□□□ -0.64
CRTC3-208ENST00000560098 DPH3Q96FX2 82 aa11.08□□□□□ -0.64
CRTC3-208ENST00000560098 RNF185Q96GF1 192 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms