RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 E7EQ34 232 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 I3L2K1 104 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 APODP05090 189 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 GCHFRP30047 84 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 SERPINB1P30740 379 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 SDC4P31431 198 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 MT4P47944 62 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 MRPS25P82663 173 aaKnown RBP-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 OR8B8Q15620 311 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 TMEM244Q5VVB8 128 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 PPP1R2P3Q6NXS1 205 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 C3orf33Q6P1S2 294 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 TMED4Q7Z7H5 227 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 SNX29P2Q8IUI4 249 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 Q8IZM0 81 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 CDC26Q8NHZ8 85 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 WFDC6Q9BQY6 131 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 LXNQ9BS40 222 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 BOLA2Q9H3K6 86 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 TMEM242Q9NWH2 141 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 LAMTOR2Q9Y2Q5 125 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 V9GYV3 84 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 PBRM1Q86U86 1689 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 HIVEP1P15822 2718 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 KNL1Q8NG31 2342 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 IBTKQ9P2D0 1353 aaPredicted RBP-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 LRP6O75581 1613 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 APOBP04114 4563 aaKnown RBP-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 ERCC6Q03468 1493 aa-0.35□□□□□ -2.47
FOXN3-216ENST00000557496 BTAF1O14981 1849 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 PSME4Q14997 1843 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 DOCK2Q92608 1830 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 C10orf71Q711Q0 1435 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 TRBV10-3A0A0K0K1G6 114 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 K7EQZ3 153 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 DEGS1O15121 323 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 KALRNO60229 2985 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 S100A6P06703 90 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 EDDM3BP56851 147 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 TCTAP57738 103 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 RBM3P98179 157 aaKnown RBP-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 SSBP1Q04837 148 aaKnown RBP-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 SPCS2Q15005 226 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 C9orf116Q5BN46 136 aaPredicted RBP-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 CLLU1Q5K131 121 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 LINC01545Q5VT33 79 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 SPAG11AQ6PDA7 123 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 CYP2G1PQ6ZSU1 146 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 CROCCP2Q86T23 111 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 MNS1Q8NEH6 495 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 DYNLRB2Q8TF09 96 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 PPDPFLQ8WWR9 84 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 CHMP6Q96FZ7 201 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 CCDC32Q9BV29 185 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 PCBD2Q9H0N5 130 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 SLC35B3Q9H1N7 401 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 BATF3Q9NR55 127 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 SMPXQ9UHP9 88 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 NDUFA12Q9UI09 145 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 PAPPAQ13219 1627 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 SPTBN4Q9H254 2564 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 DNAH2Q9P225 4427 aa-0.36□□□□□ -2.47
FOXN3-216ENST00000557496 KDM5AP29375 1690 aaKnown RBP-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 CCDC171Q6TFL3 1326 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 CUBNO60494 3623 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 DMXL1Q9Y485 3027 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 OVOS2A0A0G2JMS6 1433 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 YTHDC2Q9H6S0 1430 aaKnown RBP-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 SONP18583 2426 aaKnown RBP-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 FASNP49327 2511 aaKnown RBP-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 DNAH11Q96DT5 4516 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 TEP1Q99973 2627 aaKnown RBP-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 TRAV22A0A0B4J277 110 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 FAM236AA0A1B0GUQ0 79 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 FAM236BA0A1B0GV22 79 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 TNFSF15O95150 251 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 IFNA21P01568 189 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 APOC1P02654 83 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 PAEPP09466 180 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 SPINK8P0C7L1 97 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 HLA-DRB4P13762 266 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 SPRR1BP22528 89 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 SRP9P49458 86 aaKnown RBP-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 UBE2D1P51668 147 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 UBE2G1P62253 170 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 MRPS15P82914 257 aaKnown RBP-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 PLGLB1Q02325 96 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 KLK9Q2XQG4 91 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 TMEM128Q5BJH2 165 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 MIC13Q5XKP0 118 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 TRIQKQ629K1 86 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 SLC48A1Q6P1K1 146 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 ATP11AUNQ6ZP68 121 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 ATP6V0E2Q8NHE4 81 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 AGPAT4-IT1Q9H0P7 198 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 BANF2Q9H503 90 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 LINC00472Q9H8W2 130 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 SCN3BQ9NY72 215 aa-0.37□□□□□ -2.47
FOXN3-216ENST00000557496 TAS2R8Q9NYW2 309 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms