RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 F5H697 171 aa9.3□□□□□ -0.92
SNX6-210ENST00000557341 PLA2G1BP04054 148 aaKnown RBP9.3□□□□□ -0.92
SNX6-210ENST00000557341 SMIM17P0DL12 118 aa9.3□□□□□ -0.92
SNX6-210ENST00000557341 PKIAP61925 76 aa9.3□□□□□ -0.92
SNX6-210ENST00000557341 LINC01620Q4KN68 170 aa9.3□□□□□ -0.92
SNX6-210ENST00000557341 MPV17L2Q567V2 206 aa9.3□□□□□ -0.92
SNX6-210ENST00000557341 C14orf177Q52M58 125 aa9.29□□□□□ -0.92
SNX6-210ENST00000557341 TMEM97Q5BJF2 176 aa9.29□□□□□ -0.92
SNX6-210ENST00000557341 CENPWQ5EE01 88 aa9.29□□□□□ -0.92
SNX6-210ENST00000557341 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
SNX6-210ENST00000557341 C15orf54Q8N8G6 183 aa9.29□□□□□ -0.92
SNX6-210ENST00000557341 CHCHD5Q9BSY4 110 aa9.29□□□□□ -0.92
SNX6-210ENST00000557341 DERL1Q9BUN8 251 aa9.29□□□□□ -0.92
SNX6-210ENST00000557341 TEX46H3BTG2 121 aa9.28□□□□□ -0.92
SNX6-210ENST00000557341 ANGP03950 147 aaKnown RBP9.28□□□□□ -0.92
SNX6-210ENST00000557341 RAB5CP51148 216 aa9.28□□□□□ -0.92
SNX6-210ENST00000557341 SSTP61278 116 aa9.28□□□□□ -0.92
SNX6-210ENST00000557341 SCXQ7RTU7 201 aa9.28□□□□□ -0.92
SNX6-210ENST00000557341 VAX2Q9UIW0 290 aa9.28□□□□□ -0.92
SNX6-210ENST00000557341 TRAV1-1A0A0B4J248 108 aa9.27□□□□□ -0.93
SNX6-210ENST00000557341 EIF5AL1Q6IS14 154 aaKnown RBP9.27□□□□□ -0.93
SNX6-210ENST00000557341 ENHOQ6UWT2 76 aa9.27□□□□□ -0.93
SNX6-210ENST00000557341 SMIM12Q96EX1 92 aa9.27□□□□□ -0.93
SNX6-210ENST00000557341 TPPP3Q9BW30 176 aa9.27□□□□□ -0.93
SNX6-210ENST00000557341 KIF25-AS1Q9Y6Z4 181 aa9.27□□□□□ -0.93
SNX6-210ENST00000557341 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
SNX6-210ENST00000557341 HLA-DQA1P01909 254 aa9.26□□□□□ -0.93
SNX6-210ENST00000557341 RPS20P60866 119 aaKnown RBP9.26□□□□□ -0.93
SNX6-210ENST00000557341 CCL20P78556 96 aa9.26□□□□□ -0.93
SNX6-210ENST00000557341 MIAQ16674 131 aa9.26□□□□□ -0.93
SNX6-210ENST00000557341 FER1L6-AS1Q8NA97 138 aa9.26□□□□□ -0.93
SNX6-210ENST00000557341 DAZAP1Q96EP5 407 aaKnown RBP9.26□□□□□ -0.93
SNX6-210ENST00000557341 H7C1H1 209 aa9.25□□□□□ -0.93
SNX6-210ENST00000557341 MGPP08493 103 aa9.25□□□□□ -0.93
SNX6-210ENST00000557341 IGLC6P0CF74 106 aa9.25□□□□□ -0.93
SNX6-210ENST00000557341 GZMBP10144 247 aa9.25□□□□□ -0.93
SNX6-210ENST00000557341 GNG4P50150 75 aa9.25□□□□□ -0.93
SNX6-210ENST00000557341 MEF2BQ02080 365 aaPredicted RBP9.25□□□□□ -0.93
SNX6-210ENST00000557341 NTM-AS1Q6ZSK4 140 aa9.25□□□□□ -0.93
SNX6-210ENST00000557341 OR2D3Q8NGH3 330 aa9.25□□□□□ -0.93
SNX6-210ENST00000557341 CHAC1Q9BUX1 264 aa9.25□□□□□ -0.93
SNX6-210ENST00000557341 XKRY2A2RUG3 117 aa9.24□□□□□ -0.93
SNX6-210ENST00000557341 C19orf71A6NCJ1 209 aa9.24□□□□□ -0.93
SNX6-210ENST00000557341 PDE6DO43924 150 aa9.24□□□□□ -0.93
SNX6-210ENST00000557341 IFNA1P01562 189 aa9.24□□□□□ -0.93
SNX6-210ENST00000557341 IGLV2-8P01709 118 aa9.24□□□□□ -0.93
SNX6-210ENST00000557341 SULT1A2P50226 295 aa9.24□□□□□ -0.93
SNX6-210ENST00000557341 CACNG7P62955 275 aa9.24□□□□□ -0.93
SNX6-210ENST00000557341 USP17L23D6RBM5 183 aa9.23□□□□□ -0.93
SNX6-210ENST00000557341 J3QL48 77 aa9.23□□□□□ -0.93
SNX6-210ENST00000557341 P01737 135 aa9.23□□□□□ -0.93
SNX6-210ENST00000557341 RBX1P62877 108 aa9.23□□□□□ -0.93
SNX6-210ENST00000557341 IQCJQ1A5X6 159 aa9.23□□□□□ -0.93
SNX6-210ENST00000557341 SUMO4Q6EEV6 95 aa9.23□□□□□ -0.93
SNX6-210ENST00000557341 CLPSL2Q6UWE3 100 aa9.23□□□□□ -0.93
SNX6-210ENST00000557341 DEFB104AQ8WTQ1 72 aa9.23□□□□□ -0.93
SNX6-210ENST00000557341 PRR34Q9NV39 138 aa9.23□□□□□ -0.93
SNX6-210ENST00000557341 IGHV1-24A0A0C4DH33 117 aa9.22□□□□□ -0.93
SNX6-210ENST00000557341 RAB19A4D1S5 217 aa9.22□□□□□ -0.93
SNX6-210ENST00000557341 F2Z2F3 143 aa9.22□□□□□ -0.93
SNX6-210ENST00000557341 M0QY20 66 aa9.22□□□□□ -0.93
SNX6-210ENST00000557341 GAGE6Q13070 117 aa9.22□□□□□ -0.93
SNX6-210ENST00000557341 CIRBP-AS1Q8TBR5 109 aa9.22□□□□□ -0.93
SNX6-210ENST00000557341 BIN3Q9NQY0 253 aa9.22□□□□□ -0.93
SNX6-210ENST00000557341 TRBV20OR9-2A0A075B6H5 130 aa9.21□□□□□ -0.94
SNX6-210ENST00000557341 TRGC1P0CF51 173 aa9.21□□□□□ -0.94
SNX6-210ENST00000557341 BCL2P10415 239 aa9.21□□□□□ -0.94
SNX6-210ENST00000557341 LINC00269Q8N2A0 174 aa9.21□□□□□ -0.94
SNX6-210ENST00000557341 MED9Q9NWA0 146 aa9.21□□□□□ -0.94
SNX6-210ENST00000557341 RASL11AQ6T310 242 aa9.2□□□□□ -0.94
SNX6-210ENST00000557341 TCTE3Q8IZS6 198 aa9.2□□□□□ -0.94
SNX6-210ENST00000557341 DPH3P1Q9H4G8 78 aa9.2□□□□□ -0.94
SNX6-210ENST00000557341 TAGLN2P37802 199 aaKnown RBP9.19□□□□□ -0.94
SNX6-210ENST00000557341 NKX2-5P52952 324 aaPredicted RBP9.19□□□□□ -0.94
SNX6-210ENST00000557341 LYZL1Q6UWQ5 148 aa9.19□□□□□ -0.94
SNX6-210ENST00000557341 SLC51BQ86UW2 128 aa9.19□□□□□ -0.94
SNX6-210ENST00000557341 KRTAP29-1A8MX34 341 aaPredicted RBP9.18□□□□□ -0.94
SNX6-210ENST00000557341 PRSS1P07477 247 aa9.18□□□□□ -0.94
SNX6-210ENST00000557341 NTF3P20783 257 aa9.18□□□□□ -0.94
SNX6-210ENST00000557341 CTRLP40313 264 aa9.18□□□□□ -0.94
SNX6-210ENST00000557341 REG3AQ06141 175 aa9.18□□□□□ -0.94
SNX6-210ENST00000557341 DGAT2L7PQ6IED9 249 aa9.18□□□□□ -0.94
SNX6-210ENST00000557341 PGLYRP4Q96LB8 373 aa9.18□□□□□ -0.94
SNX6-210ENST00000557341 TMEM243Q9BU79 118 aa9.18□□□□□ -0.94
SNX6-210ENST00000557341 KRTAP26-1Q6PEX3 210 aa9.17□□□□□ -0.94
SNX6-210ENST00000557341 NIT2Q9NQR4 276 aa9.17□□□□□ -0.94
SNX6-210ENST00000557341 IGLV10-54A0A075B6I4 117 aa9.16□□□□□ -0.94
SNX6-210ENST00000557341 TRAV8-4A0A0B4J246 113 aa9.16□□□□□ -0.94
SNX6-210ENST00000557341 A0A1B0GUV1 79 aa9.16□□□□□ -0.94
SNX6-210ENST00000557341 UBE2L6O14933 153 aa9.16□□□□□ -0.94
SNX6-210ENST00000557341 KRTAP10-4P60372 401 aaPredicted RBP9.16□□□□□ -0.94
SNX6-210ENST00000557341 WDR73Q6P4I2 378 aa9.16□□□□□ -0.94
SNX6-210ENST00000557341 C9orf62Q8N4C0 152 aa9.16□□□□□ -0.94
SNX6-210ENST00000557341 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
SNX6-210ENST00000557341 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
SNX6-210ENST00000557341 CNFNQ9BYD5 112 aa9.16□□□□□ -0.94
SNX6-210ENST00000557341 RPP21Q9H633 154 aaKnown RBP9.16□□□□□ -0.94
SNX6-210ENST00000557341 AMTP48728 403 aa9.15□□□□□ -0.94
SNX6-210ENST00000557341 COTL1Q14019 142 aa9.15□□□□□ -0.94
SNX6-210ENST00000557341 TWIST1Q15672 202 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms