RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.34□□□□□ -0.59
GPHN-211ENST00000556020 OR2D3Q8NGH3 330 aa11.34□□□□□ -0.59
GPHN-211ENST00000556020 AP1S3Q96PC3 154 aa11.34□□□□□ -0.59
GPHN-211ENST00000556020 CHCHD5Q9BSY4 110 aa11.34□□□□□ -0.59
GPHN-211ENST00000556020 CHCHD7Q9BUK0 85 aa11.34□□□□□ -0.59
GPHN-211ENST00000556020 FAM229AH3BQW9 127 aa11.33□□□□□ -0.6
GPHN-211ENST00000556020 IFNA1P01562 189 aa11.33□□□□□ -0.6
GPHN-211ENST00000556020 IGLV2-8P01709 118 aa11.33□□□□□ -0.6
GPHN-211ENST00000556020 MGPP08493 103 aa11.33□□□□□ -0.6
GPHN-211ENST00000556020 MEF2BQ02080 365 aaPredicted RBP11.33□□□□□ -0.6
GPHN-211ENST00000556020 C15orf54Q8N8G6 183 aa11.33□□□□□ -0.6
GPHN-211ENST00000556020 MED9Q9NWA0 146 aa11.33□□□□□ -0.6
GPHN-211ENST00000556020 DNAH8Q96JB1 4490 aa11.32□□□□□ -0.6
GPHN-211ENST00000556020 CRPP02741 224 aa11.32□□□□□ -0.6
GPHN-211ENST00000556020 MPV17L2Q567V2 206 aa11.32□□□□□ -0.6
GPHN-211ENST00000556020 TCTE3Q8IZS6 198 aa11.32□□□□□ -0.6
GPHN-211ENST00000556020 FER1L6-AS1Q8NA97 138 aa11.32□□□□□ -0.6
GPHN-211ENST00000556020 KIF25-AS1Q9Y6Z4 181 aa11.32□□□□□ -0.6
GPHN-211ENST00000556020 SRRM2Q9UQ35 2752 aaKnown RBP11.32□□□□□ -0.6
GPHN-211ENST00000556020 RPS20P60866 119 aaKnown RBP11.31□□□□□ -0.6
GPHN-211ENST00000556020 Q8N976 141 aa11.31□□□□□ -0.6
GPHN-211ENST00000556020 PDE6DO43924 150 aa11.3□□□□□ -0.6
GPHN-211ENST00000556020 P01737 135 aa11.3□□□□□ -0.6
GPHN-211ENST00000556020 ANGP03950 147 aaKnown RBP11.3□□□□□ -0.6
GPHN-211ENST00000556020 IGLC6P0CF74 106 aa11.3□□□□□ -0.6
GPHN-211ENST00000556020 BCL2P10415 239 aa11.3□□□□□ -0.6
GPHN-211ENST00000556020 Q0VG73 95 aa11.3□□□□□ -0.6
GPHN-211ENST00000556020 C1orf43Q9BWL3 253 aa11.3□□□□□ -0.6
GPHN-211ENST00000556020 C19orf71A6NCJ1 209 aa11.29□□□□□ -0.6
GPHN-211ENST00000556020 C1QBP02746 253 aa11.29□□□□□ -0.6
GPHN-211ENST00000556020 ENHOQ6UWT2 76 aa11.29□□□□□ -0.6
GPHN-211ENST00000556020 NTM-AS1Q6ZSK4 140 aa11.29□□□□□ -0.6
GPHN-211ENST00000556020 SLC51BQ86UW2 128 aa11.29□□□□□ -0.6
GPHN-211ENST00000556020 TRBV20OR9-2A0A075B6H5 130 aa11.28□□□□□ -0.6
GPHN-211ENST00000556020 CACNG7P62955 275 aa11.28□□□□□ -0.6
GPHN-211ENST00000556020 GAGE6Q13070 117 aa11.28□□□□□ -0.6
GPHN-211ENST00000556020 ATRAIDQ6UW56 229 aa11.28□□□□□ -0.6
GPHN-211ENST00000556020 CLPSL2Q6UWE3 100 aa11.28□□□□□ -0.6
GPHN-211ENST00000556020 VAX2Q9UIW0 290 aa11.28□□□□□ -0.6
GPHN-211ENST00000556020 XKRY2A2RUG3 117 aa11.27□□□□□ -0.61
GPHN-211ENST00000556020 HLA-DQA1P01909 254 aa11.27□□□□□ -0.61
GPHN-211ENST00000556020 TMEM97Q5BJF2 176 aa11.27□□□□□ -0.61
GPHN-211ENST00000556020 SUMO4Q6EEV6 95 aa11.27□□□□□ -0.61
GPHN-211ENST00000556020 LYZL1Q6UWQ5 148 aa11.27□□□□□ -0.61
GPHN-211ENST00000556020 SMIM12Q96EX1 92 aa11.27□□□□□ -0.61
GPHN-211ENST00000556020 hCG_2014768A0A024R1R8 64 aa11.26□□□□□ -0.61
GPHN-211ENST00000556020 TRBV25-1A0A075B6N4 114 aa11.26□□□□□ -0.61
GPHN-211ENST00000556020 H7C1H1 209 aa11.26□□□□□ -0.61
GPHN-211ENST00000556020 M0QY20 66 aa11.26□□□□□ -0.61
GPHN-211ENST00000556020 PKIAP61925 76 aa11.26□□□□□ -0.61
GPHN-211ENST00000556020 BIN3Q9NQY0 253 aa11.26□□□□□ -0.61
GPHN-211ENST00000556020 NKX2-5P52952 324 aaPredicted RBP11.25□□□□□ -0.61
GPHN-211ENST00000556020 Q6ZSA8 131 aa11.25□□□□□ -0.61
GPHN-211ENST00000556020 DEFB104AQ8WTQ1 72 aa11.25□□□□□ -0.61
GPHN-211ENST00000556020 FLG2Q5D862 2391 aaPredicted RBP11.24□□□□□ -0.61
GPHN-211ENST00000556020 F2Z2F3 143 aa11.24□□□□□ -0.61
GPHN-211ENST00000556020 TRGC1P0CF51 173 aa11.24□□□□□ -0.61
GPHN-211ENST00000556020 RBX1P62877 108 aa11.24□□□□□ -0.61
GPHN-211ENST00000556020 Q6ZNX1 250 aa11.24□□□□□ -0.61
GPHN-211ENST00000556020 LINC00528Q8N1L1 170 aa11.24□□□□□ -0.61
GPHN-211ENST00000556020 NUDT10Q8NFP7 164 aa11.24□□□□□ -0.61
GPHN-211ENST00000556020 NUDT11Q96G61 164 aa11.24□□□□□ -0.61
GPHN-211ENST00000556020 DMBT1Q9UGM3 2413 aaPredicted RBP11.23□□□□□ -0.61
GPHN-211ENST00000556020 IGHV1-24A0A0C4DH33 117 aa11.23□□□□□ -0.61
GPHN-211ENST00000556020 NTF3P20783 257 aa11.23□□□□□ -0.61
GPHN-211ENST00000556020 MIAQ16674 131 aa11.23□□□□□ -0.61
GPHN-211ENST00000556020 C14orf177Q52M58 125 aa11.23□□□□□ -0.61
GPHN-211ENST00000556020 AKAP14Q86UN6 197 aa11.23□□□□□ -0.61
GPHN-211ENST00000556020 LINC00269Q8N2A0 174 aa11.23□□□□□ -0.61
GPHN-211ENST00000556020 RNASE7Q9H1E1 156 aaKnown RBP11.23□□□□□ -0.61
GPHN-211ENST00000556020 USP17L23D6RBM5 183 aa11.22□□□□□ -0.61
GPHN-211ENST00000556020 TAGLN2P37802 199 aaKnown RBP11.22□□□□□ -0.61
GPHN-211ENST00000556020 RASL11AQ6T310 242 aa11.22□□□□□ -0.61
GPHN-211ENST00000556020 SCXQ7RTU7 201 aa11.22□□□□□ -0.61
GPHN-211ENST00000556020 C9orf62Q8N4C0 152 aa11.22□□□□□ -0.61
GPHN-211ENST00000556020 DPH3P1Q9H4G8 78 aa11.22□□□□□ -0.61
GPHN-211ENST00000556020 TWIST1Q15672 202 aa11.21□□□□□ -0.61
GPHN-211ENST00000556020 IQCJQ1A5X6 159 aa11.21□□□□□ -0.61
GPHN-211ENST00000556020 ALKAL2Q6UX46 152 aa11.21□□□□□ -0.61
GPHN-211ENST00000556020 OCC1Q8TAD7 63 aa11.21□□□□□ -0.61
GPHN-211ENST00000556020 RPP21Q9H633 154 aaKnown RBP11.21□□□□□ -0.61
GPHN-211ENST00000556020 HERC1Q15751 4861 aa11.21□□□□□ -0.62
GPHN-211ENST00000556020 IGLV10-54A0A075B6I4 117 aa11.2□□□□□ -0.62
GPHN-211ENST00000556020 K7EN84 100 aa11.2□□□□□ -0.62
GPHN-211ENST00000556020 PLA2G1BP04054 148 aaKnown RBP11.2□□□□□ -0.62
GPHN-211ENST00000556020 CTRLP40313 264 aa11.2□□□□□ -0.62
GPHN-211ENST00000556020 MYCBP2O75592 4640 aa11.2□□□□□ -0.62
GPHN-211ENST00000556020 CEBPGP53567 150 aa11.19□□□□□ -0.62
GPHN-211ENST00000556020 TMEM243Q9BU79 118 aa11.19□□□□□ -0.62
GPHN-211ENST00000556020 NIT2Q9NQR4 276 aa11.19□□□□□ -0.62
GPHN-211ENST00000556020 PRR34Q9NV39 138 aa11.19□□□□□ -0.62
GPHN-211ENST00000556020 REG3AQ06141 175 aa11.18□□□□□ -0.62
GPHN-211ENST00000556020 CHAC1Q9BUX1 264 aa11.18□□□□□ -0.62
GPHN-211ENST00000556020 TRAV26-2A0A0B4J265 109 aa11.17□□□□□ -0.62
GPHN-211ENST00000556020 PRSS1P07477 247 aa11.17□□□□□ -0.62
GPHN-211ENST00000556020 BLOC1S1P78537 153 aa11.17□□□□□ -0.62
GPHN-211ENST00000556020 WDR73Q6P4I2 378 aa11.17□□□□□ -0.62
GPHN-211ENST00000556020 UBE2L6O14933 153 aa11.16□□□□□ -0.62
GPHN-211ENST00000556020 AMTP48728 403 aa11.16□□□□□ -0.62
GPHN-211ENST00000556020 C20orf203Q8NBC4 194 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms