RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 DNAJC30Q96LL9 226 aa11.18□□□□□ -0.62
BRF1-219ENST00000551787 PGPEP1Q9NXJ5 209 aa11.18□□□□□ -0.62
BRF1-219ENST00000551787 URGCP-MRPS24S4R325 110 aa11.18□□□□□ -0.62
BRF1-219ENST00000551787 TMEM262E9PQX1 116 aa11.17□□□□□ -0.62
BRF1-219ENST00000551787 M0QY20 66 aa11.16□□□□□ -0.62
BRF1-219ENST00000551787 TWIST1Q15672 202 aa11.16□□□□□ -0.62
BRF1-219ENST00000551787 SUMO4Q6EEV6 95 aa11.16□□□□□ -0.62
BRF1-219ENST00000551787 GTSF1Q8WW33 167 aa11.16□□□□□ -0.62
BRF1-219ENST00000551787 FAM210AQ96ND0 272 aa11.16□□□□□ -0.62
BRF1-219ENST00000551787 KRTAP17-1Q9BYP8 105 aa11.16□□□□□ -0.62
BRF1-219ENST00000551787 A0A087WX48 190 aa11.15□□□□□ -0.62
BRF1-219ENST00000551787 TRBV6-8A0A0A6YYG3 113 aa11.15□□□□□ -0.62
BRF1-219ENST00000551787 LRCOL1A6NCL2 159 aa11.15□□□□□ -0.62
BRF1-219ENST00000551787 CTRLP40313 264 aa11.15□□□□□ -0.62
BRF1-219ENST00000551787 SMIM7Q9BQ49 75 aa11.15□□□□□ -0.62
BRF1-219ENST00000551787 KLK12Q9UKR0 248 aa11.15□□□□□ -0.62
BRF1-219ENST00000551787 TRAV8-3A0A0A6YYJ7 113 aa11.14□□□□□ -0.63
BRF1-219ENST00000551787 GATCO43716 136 aaKnown RBP11.14□□□□□ -0.63
BRF1-219ENST00000551787 CDK2AP2O75956 126 aa11.14□□□□□ -0.63
BRF1-219ENST00000551787 SRP19P09132 144 aaKnown RBP11.14□□□□□ -0.63
BRF1-219ENST00000551787 TRGC1P0CF51 173 aa11.14□□□□□ -0.63
BRF1-219ENST00000551787 LAGE3Q14657 143 aa11.14□□□□□ -0.63
BRF1-219ENST00000551787 DEFB104AQ8WTQ1 72 aa11.14□□□□□ -0.63
BRF1-219ENST00000551787 ZNF727A8MUV8 499 aa11.13□□□□□ -0.63
BRF1-219ENST00000551787 IFITM2Q01629 132 aa11.13□□□□□ -0.63
BRF1-219ENST00000551787 KCNIP4Q6PIL6 250 aa11.13□□□□□ -0.63
BRF1-219ENST00000551787 NTM-AS1Q6ZSK4 140 aa11.13□□□□□ -0.63
BRF1-219ENST00000551787 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.13□□□□□ -0.63
BRF1-219ENST00000551787 UBE2WQ96B02 151 aa11.13□□□□□ -0.63
BRF1-219ENST00000551787 CHCHD5Q9BSY4 110 aa11.13□□□□□ -0.63
BRF1-219ENST00000551787 TM2D2Q9BX73 214 aa11.13□□□□□ -0.63
BRF1-219ENST00000551787 LECT2O14960 151 aa11.12□□□□□ -0.63
BRF1-219ENST00000551787 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
BRF1-219ENST00000551787 KRTAP10-1P60331 282 aa11.12□□□□□ -0.63
BRF1-219ENST00000551787 WDR73Q6P4I2 378 aa11.12□□□□□ -0.63
BRF1-219ENST00000551787 PGLYRP4Q96LB8 373 aa11.12□□□□□ -0.63
BRF1-219ENST00000551787 KRTAP4-5Q9BYR2 181 aa11.12□□□□□ -0.63
BRF1-219ENST00000551787 DPH3P1Q9H4G8 78 aa11.12□□□□□ -0.63
BRF1-219ENST00000551787 C9JQL5 133 aa11.11□□□□□ -0.63
BRF1-219ENST00000551787 H7C1H1 209 aa11.11□□□□□ -0.63
BRF1-219ENST00000551787 WFDC2Q14508 124 aa11.11□□□□□ -0.63
BRF1-219ENST00000551787 FAM231DQ6ZW35 169 aa11.11□□□□□ -0.63
BRF1-219ENST00000551787 LINC01551Q86U37 167 aa11.11□□□□□ -0.63
BRF1-219ENST00000551787 MAPKAPK5-AS1Q8N8E1 139 aa11.11□□□□□ -0.63
BRF1-219ENST00000551787 IGKV2D-24A0A075B6R9 120 aa11.1□□□□□ -0.63
BRF1-219ENST00000551787 A8MWL6 223 aa11.1□□□□□ -0.63
BRF1-219ENST00000551787 GAGE6Q13070 117 aa11.1□□□□□ -0.63
BRF1-219ENST00000551787 MPV17L2Q567V2 206 aa11.1□□□□□ -0.63
BRF1-219ENST00000551787 CDPF1Q6NVV7 123 aa11.1□□□□□ -0.63
BRF1-219ENST00000551787 RASL11AQ6T310 242 aa11.1□□□□□ -0.63
BRF1-219ENST00000551787 C15orf54Q8N8G6 183 aa11.1□□□□□ -0.63
BRF1-219ENST00000551787 Q8N976 141 aa11.1□□□□□ -0.63
BRF1-219ENST00000551787 BAALCQ8WXS3 180 aa11.1□□□□□ -0.63
BRF1-219ENST00000551787 CNFNQ9BYD5 112 aa11.1□□□□□ -0.63
BRF1-219ENST00000551787 TRAV26-2A0A0B4J265 109 aa11.09□□□□□ -0.63
BRF1-219ENST00000551787 SRSF3P84103 164 aaKnown RBP11.09□□□□□ -0.63
BRF1-219ENST00000551787 Q8N814 137 aa11.09□□□□□ -0.63
BRF1-219ENST00000551787 IGLV5-52A0A0A0MRZ9 124 aa11.08□□□□□ -0.64
BRF1-219ENST00000551787 ELOBQ15370 118 aa11.08□□□□□ -0.64
BRF1-219ENST00000551787 ATRAIDQ6UW56 229 aa11.08□□□□□ -0.64
BRF1-219ENST00000551787 CHCHD7Q9BUK0 85 aa11.08□□□□□ -0.64
BRF1-219ENST00000551787 NIT2Q9NQR4 276 aa11.08□□□□□ -0.64
BRF1-219ENST00000551787 NDUFS6O75380 124 aaKnown RBP11.07□□□□□ -0.64
BRF1-219ENST00000551787 ANGP03950 147 aaKnown RBP11.07□□□□□ -0.64
BRF1-219ENST00000551787 GCSHP23434 173 aa11.07□□□□□ -0.64
BRF1-219ENST00000551787 TMEM97Q5BJF2 176 aa11.07□□□□□ -0.64
BRF1-219ENST00000551787 ENHOQ6UWT2 76 aa11.07□□□□□ -0.64
BRF1-219ENST00000551787 GATD1Q8NB37 220 aa11.07□□□□□ -0.64
BRF1-219ENST00000551787 TRBV25-1A0A075B6N4 114 aa11.06□□□□□ -0.64
BRF1-219ENST00000551787 RBX1P62877 108 aa11.06□□□□□ -0.64
BRF1-219ENST00000551787 TMEM241Q24JQ0 296 aa11.06□□□□□ -0.64
BRF1-219ENST00000551787 SMIM15Q7Z3B0 74 aa11.06□□□□□ -0.64
BRF1-219ENST00000551787 RMI2Q96E14 147 aa11.06□□□□□ -0.64
BRF1-219ENST00000551787 IGHV1-24A0A0C4DH33 117 aa11.05□□□□□ -0.64
BRF1-219ENST00000551787 HIGD1CA8MV81 97 aa11.05□□□□□ -0.64
BRF1-219ENST00000551787 RAB14P61106 215 aa11.05□□□□□ -0.64
BRF1-219ENST00000551787 CT83Q5H943 113 aa11.05□□□□□ -0.64
BRF1-219ENST00000551787 CLPSL2Q6UWE3 100 aa11.05□□□□□ -0.64
BRF1-219ENST00000551787 TSKUQ8WUA8 353 aa11.05□□□□□ -0.64
BRF1-219ENST00000551787 RPL39LQ96EH5 51 aaKnown RBP11.05□□□□□ -0.64
BRF1-219ENST00000551787 OSTCQ9NRP0 149 aa11.05□□□□□ -0.64
BRF1-219ENST00000551787 PCLOQ9Y6V0 5065 aa11.05□□□□□ -0.64
BRF1-219ENST00000551787 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.04□□□□□ -0.64
BRF1-219ENST00000551787 Q0VG73 95 aa11.04□□□□□ -0.64
BRF1-219ENST00000551787 PEA15Q15121 130 aa11.04□□□□□ -0.64
BRF1-219ENST00000551787 IQCJQ1A5X6 159 aa11.04□□□□□ -0.64
BRF1-219ENST00000551787 COX11Q9Y6N1 276 aa11.04□□□□□ -0.64
BRF1-219ENST00000551787 CRPP02741 224 aa11.03□□□□□ -0.64
BRF1-219ENST00000551787 XGP55808 180 aa11.03□□□□□ -0.64
BRF1-219ENST00000551787 PKIAP61925 76 aa11.03□□□□□ -0.64
BRF1-219ENST00000551787 RPL23P62829 140 aaKnown RBP11.03□□□□□ -0.64
BRF1-219ENST00000551787 ADIRFQ15847 76 aa11.03□□□□□ -0.64
BRF1-219ENST00000551787 FAM74A3Q4VXF1 159 aa11.03□□□□□ -0.64
BRF1-219ENST00000551787 LINC00269Q8N2A0 174 aa11.03□□□□□ -0.64
BRF1-219ENST00000551787 NTN5Q8WTR8 489 aaPredicted RBP11.03□□□□□ -0.64
BRF1-219ENST00000551787 ISOC2Q96AB3 205 aa11.03□□□□□ -0.64
BRF1-219ENST00000551787 BORCS7Q96B45 105 aa11.03□□□□□ -0.64
BRF1-219ENST00000551787 V9GYV3 84 aa11.03□□□□□ -0.64
BRF1-219ENST00000551787 A0A1B0GUT8 65 aa11.02□□□□□ -0.65
BRF1-219ENST00000551787 HAMPP81172 84 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms