RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 SSBP4Q9BWG4 385 aaPredicted RBP7.44□□□□□ -1.22
PRPF40B-212ENST00000551111 KIF25-AS1Q9Y6Z4 181 aa7.44□□□□□ -1.22
PRPF40B-212ENST00000551111 SNAI2O43623 268 aa7.43□□□□□ -1.22
PRPF40B-212ENST00000551111 SEC11BP0C7V7 166 aa7.43□□□□□ -1.22
PRPF40B-212ENST00000551111 GAGE6Q13070 117 aa7.43□□□□□ -1.22
PRPF40B-212ENST00000551111 STOML3Q8TAV4 291 aa7.43□□□□□ -1.22
PRPF40B-212ENST00000551111 CHCHD5Q9BSY4 110 aa7.43□□□□□ -1.22
PRPF40B-212ENST00000551111 F5H697 171 aa7.42□□□□□ -1.22
PRPF40B-212ENST00000551111 OXTP01178 125 aa7.42□□□□□ -1.22
PRPF40B-212ENST00000551111 GZMBP10144 247 aa7.42□□□□□ -1.22
PRPF40B-212ENST00000551111 RBX1P62877 108 aa7.42□□□□□ -1.22
PRPF40B-212ENST00000551111 KCNIP4Q6PIL6 250 aa7.42□□□□□ -1.22
PRPF40B-212ENST00000551111 BAGE2Q86Y30 109 aa7.42□□□□□ -1.22
PRPF40B-212ENST00000551111 FAM213BQ8TBF2 198 aa7.42□□□□□ -1.22
PRPF40B-212ENST00000551111 SFT2D1Q8WV19 159 aa7.42□□□□□ -1.22
PRPF40B-212ENST00000551111 MBD3L1Q8WWY6 194 aa7.42□□□□□ -1.22
PRPF40B-212ENST00000551111 DERL1Q9BUN8 251 aa7.42□□□□□ -1.22
PRPF40B-212ENST00000551111 ZNF471Q9BX82 626 aaPredicted RBP7.42□□□□□ -1.22
PRPF40B-212ENST00000551111 CRPP02741 224 aa7.41□□□□□ -1.22
PRPF40B-212ENST00000551111 RPL37AP61513 92 aaKnown RBP7.41□□□□□ -1.22
PRPF40B-212ENST00000551111 CCL20P78556 96 aa7.41□□□□□ -1.22
PRPF40B-212ENST00000551111 LINC00269Q8N2A0 174 aa7.41□□□□□ -1.22
PRPF40B-212ENST00000551111 C9orf163Q8N9P6 203 aa7.41□□□□□ -1.22
PRPF40B-212ENST00000551111 PRR34Q9NV39 138 aa7.41□□□□□ -1.22
PRPF40B-212ENST00000551111 VAX2Q9UIW0 290 aa7.41□□□□□ -1.22
PRPF40B-212ENST00000551111 IGLV10-54A0A075B6I4 117 aa7.4□□□□□ -1.22
PRPF40B-212ENST00000551111 SLPIP03973 132 aa7.4□□□□□ -1.22
PRPF40B-212ENST00000551111 CXCL1P09341 107 aa7.4□□□□□ -1.22
PRPF40B-212ENST00000551111 OR5AL1P0C617 328 aa7.4□□□□□ -1.22
PRPF40B-212ENST00000551111 C14orf177Q52M58 125 aa7.4□□□□□ -1.22
PRPF40B-212ENST00000551111 SERTAD4-AS1Q5TG53 156 aa7.4□□□□□ -1.22
PRPF40B-212ENST00000551111 SPANXN1Q5VSR9 72 aa7.4□□□□□ -1.22
PRPF40B-212ENST00000551111 SDIM1Q6ZPB5 146 aa7.4□□□□□ -1.22
PRPF40B-212ENST00000551111 TMUB2Q71RG4 321 aa7.4□□□□□ -1.22
PRPF40B-212ENST00000551111 TCEAL7Q9BRU2 100 aa7.4□□□□□ -1.22
PRPF40B-212ENST00000551111 GFRA4Q9GZZ7 299 aa7.4□□□□□ -1.22
PRPF40B-212ENST00000551111 MT1HL1P0DM35 61 aa7.39□□□□□ -1.23
PRPF40B-212ENST00000551111 MIAQ16674 131 aa7.39□□□□□ -1.23
PRPF40B-212ENST00000551111 KCNRGQ8N5I3 272 aa7.39□□□□□ -1.23
PRPF40B-212ENST00000551111 C20orf203Q8NBC4 194 aa7.39□□□□□ -1.23
PRPF40B-212ENST00000551111 BATF3Q9NR55 127 aa7.39□□□□□ -1.23
PRPF40B-212ENST00000551111 IGLV4-60A0A075B6I1 120 aa7.38□□□□□ -1.23
PRPF40B-212ENST00000551111 M0QY20 66 aa7.38□□□□□ -1.23
PRPF40B-212ENST00000551111 RPL35P42766 123 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-212ENST00000551111 DGAT2L7PQ6IED9 249 aa7.38□□□□□ -1.23
PRPF40B-212ENST00000551111 S100A9P06702 114 aaKnown RBP7.37□□□□□ -1.23
PRPF40B-212ENST00000551111 MGPP08493 103 aa7.37□□□□□ -1.23
PRPF40B-212ENST00000551111 IGLC6P0CF74 106 aa7.37□□□□□ -1.23
PRPF40B-212ENST00000551111 CHTF8P0CG12 524 aa7.37□□□□□ -1.23
PRPF40B-212ENST00000551111 RAB5CP51148 216 aa7.37□□□□□ -1.23
PRPF40B-212ENST00000551111 IQCJQ1A5X6 159 aa7.37□□□□□ -1.23
PRPF40B-212ENST00000551111 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
PRPF40B-212ENST00000551111 PLA2G2DQ9UNK4 145 aa7.37□□□□□ -1.23
PRPF40B-212ENST00000551111 TNXBP22105 4242 aa7.37□□□□□ -1.23
PRPF40B-212ENST00000551111 TRBV25-1A0A075B6N4 114 aa7.36□□□□□ -1.23
PRPF40B-212ENST00000551111 RAB19A4D1S5 217 aa7.36□□□□□ -1.23
PRPF40B-212ENST00000551111 H2AFB1P0C5Y9 115 aa7.36□□□□□ -1.23
PRPF40B-212ENST00000551111 NKX2-5P52952 324 aaPredicted RBP7.36□□□□□ -1.23
PRPF40B-212ENST00000551111 REG3AQ06141 175 aa7.36□□□□□ -1.23
PRPF40B-212ENST00000551111 TPPP3Q9BW30 176 aa7.36□□□□□ -1.23
PRPF40B-212ENST00000551111 C19orf71A6NCJ1 209 aa7.35□□□□□ -1.23
PRPF40B-212ENST00000551111 UMAD1C9J7I0 102 aa7.35□□□□□ -1.23
PRPF40B-212ENST00000551111 PFDN1O60925 122 aa7.35□□□□□ -1.23
PRPF40B-212ENST00000551111 SMIM17P0DL12 118 aa7.35□□□□□ -1.23
PRPF40B-212ENST00000551111 ZNF345Q14585 488 aa7.35□□□□□ -1.23
PRPF40B-212ENST00000551111 AP1S3Q96PC3 154 aa7.35□□□□□ -1.23
PRPF40B-212ENST00000551111 IGHV1-24A0A0C4DH33 117 aa7.34□□□□□ -1.23
PRPF40B-212ENST00000551111 hDV102S1A0JD36 115 aa7.34□□□□□ -1.23
PRPF40B-212ENST00000551111 BCL2L11O43521 198 aa7.34□□□□□ -1.23
PRPF40B-212ENST00000551111 CIRBPQ14011 172 aaKnown RBP7.34□□□□□ -1.23
PRPF40B-212ENST00000551111 TMEM97Q5BJF2 176 aa7.34□□□□□ -1.23
PRPF40B-212ENST00000551111 CENPWQ5EE01 88 aa7.34□□□□□ -1.23
PRPF40B-212ENST00000551111 FER1L6-AS1Q8NA97 138 aa7.34□□□□□ -1.23
PRPF40B-212ENST00000551111 OR2D3Q8NGH3 330 aa7.34□□□□□ -1.23
PRPF40B-212ENST00000551111 C11orf52Q96A22 123 aa7.34□□□□□ -1.23
PRPF40B-212ENST00000551111 GNG13Q9P2W3 67 aa7.34□□□□□ -1.23
PRPF40B-212ENST00000551111 TRBV20OR9-2A0A075B6H5 130 aa7.33□□□□□ -1.24
PRPF40B-212ENST00000551111 HMSDA8MTL9 139 aa7.33□□□□□ -1.24
PRPF40B-212ENST00000551111 PKIAP61925 76 aa7.33□□□□□ -1.24
PRPF40B-212ENST00000551111 CNBPP62633 177 aaKnown RBP7.33□□□□□ -1.24
PRPF40B-212ENST00000551111 ODF1Q14990 250 aa7.33□□□□□ -1.24
PRPF40B-212ENST00000551111 RGS21Q2M5E4 152 aa7.33□□□□□ -1.24
PRPF40B-212ENST00000551111 LYZL1Q6UWQ5 148 aa7.33□□□□□ -1.24
PRPF40B-212ENST00000551111 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.33□□□□□ -1.24
PRPF40B-212ENST00000551111 A0A087WYN8 130 aa7.32□□□□□ -1.24
PRPF40B-212ENST00000551111 CLRN3Q8NCR9 226 aa7.32□□□□□ -1.24
PRPF40B-212ENST00000551111 TMEM243Q9BU79 118 aa7.32□□□□□ -1.24
PRPF40B-212ENST00000551111 A0A0D9SG52 128 aa7.31□□□□□ -1.24
PRPF40B-212ENST00000551111 A0A1B0GUV1 79 aa7.31□□□□□ -1.24
PRPF40B-212ENST00000551111 KANTRA0A1W2PQU2 76 aa7.31□□□□□ -1.24
PRPF40B-212ENST00000551111 NTF3P20783 257 aa7.31□□□□□ -1.24
PRPF40B-212ENST00000551111 RASL11AQ6T310 242 aa7.31□□□□□ -1.24
PRPF40B-212ENST00000551111 C15orf56Q8N910 161 aa7.31□□□□□ -1.24
PRPF40B-212ENST00000551111 LRP2P98164 4655 aa7.3□□□□□ -1.24
PRPF40B-212ENST00000551111 TRAV26-2A0A0B4J265 109 aa7.3□□□□□ -1.24
PRPF40B-212ENST00000551111 IGKV3OR2-268A0A0C4DH90 116 aa7.3□□□□□ -1.24
PRPF40B-212ENST00000551111 SPACA4Q8TDM5 124 aa7.3□□□□□ -1.24
PRPF40B-212ENST00000551111 MANBALQ9NQG1 85 aa7.3□□□□□ -1.24
PRPF40B-212ENST00000551111 NIT2Q9NQR4 276 aa7.3□□□□□ -1.24
PRPF40B-212ENST00000551111 IGHV3-64A0A075B6Q5 118 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms