RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 LGALS9BQ3B8N2 356 aa4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 KIAA1644Q3SXP7 199 aa4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 MRPL51Q4U2R6 128 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 C14orf178Q8N769 122 aaPredicted RBP4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 POM121L12Q8N7R1 296 aa4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 RASL10AQ92737 203 aa4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 RNF183Q96D59 192 aa4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 C16orf74Q96GX8 76 aa4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 AP1S3Q96PC3 154 aa4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 OVOL2Q9BRP0 275 aa4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 ALKBH7Q9BT30 221 aaPredicted RBP4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 KIF25-AS1Q9Y6Z4 181 aa4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 A8MWV9 139 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 CRYGDP07320 174 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 SMIM17P0DL12 118 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 SRIP30626 198 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 LINC00315P59091 139 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 Q0VG73 95 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 DEFB135Q30KP9 77 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 OR10J3Q5JRS4 329 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 COA6Q5JTJ3 125 aaKnown RBP4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 AMN1Q8IY45 258 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 RNF185Q96GF1 192 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 DPH3P1Q9H4G8 78 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 JPT2Q9H910 190 aa4.39□□□□□ -1.71
DEPDC4-209ENST00000550587 PLAC8L1A1L4L8 177 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 S100A6P06703 90 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 MIFP14174 115 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 CKS2P33552 79 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 NDUFA6P56556 154 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 TCTAP57738 103 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 LGALS9CQ6DKI2 356 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 ORMDL3Q8N138 153 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 OR11H2Q8NH07 326 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 C18orf32Q8TCD1 76 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 PHLDA1Q8WV24 401 aaPredicted RBP4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 MRAP2Q96G30 205 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 PRELID3AQ96N28 172 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 DKK2Q9UBU2 259 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 LAMTOR2Q9Y2Q5 125 aa4.38□□□□□ -1.71
DEPDC4-209ENST00000550587 NACAE9PAV3 2078 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 TRGV1A0A0A0MS02 117 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 C5orf52A6NGY3 159 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 PRSS47A8MTI9 375 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 D6R8Y8 96 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 RS1O15537 224 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 CIDEAO60543 219 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 PPP1R17O96001 155 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 SNRPEP62304 92 aaKnown RBP4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 CFAP126Q5VTH2 177 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 UFSP1Q6NVU6 142 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 ZFP2Q6ZN57 461 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 Q6ZTI0 123 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 BAGE3Q86Y29 109 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 C11orf45Q8TAV5 145 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 SAMD10Q9BYL1 202 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 NOP10Q9NPE3 64 aaKnown RBP4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 COX11Q9Y6N1 276 aa4.37□□□□□ -1.71
DEPDC4-209ENST00000550587 A0A087WWL8 130 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 TRAV4A0A0B4J268 109 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 LYRM9A8MSI8 78 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 F5H697 171 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 RHODO00212 210 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 TNFRSF6BO95407 300 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 ESDP10768 282 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 FOXI1Q12951 378 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 NIT1Q86X76 327 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 LINC00612Q8N6U2 182 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 NRACQ8N912 160 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 Q8NAQ8 132 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 OR4C5Q8NGB2 326 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 C18orf15Q96N68 181 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 C20orf78Q9BR46 151 aa4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 MRPL16Q9NX20 251 aaKnown RBP4.36□□□□□ -1.71
DEPDC4-209ENST00000550587 HUWE1Q7Z6Z7 4374 aaKnown RBP4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 TRAV26-2A0A0B4J265 109 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 IGHV4-28A0A0C4DH34 117 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 GAGE12BA1L429 117 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 SMKR1H3BMG3 65 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 H7C1H1 209 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 M0QY20 66 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 GAGE7O76087 117 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 GAS8-AS1O95177 125 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 NPYP01303 97 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 IGHV3-53P01767 116 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 MGPP08493 103 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 LINC00614P0C842 121 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 GAGE12FP0CL80 117 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 GAGE12GP0CL81 117 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 GAGE12IP0CL82 117 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 GATA1P15976 413 aaPredicted RBP4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 EMP1P54849 157 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 RPL32P62910 135 aaKnown RBP4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 FAM74A4Q5TZK3 123 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 SUMO4Q6EEV6 95 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 PRSS3P2Q8NHM4 247 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 NIT2Q9NQR4 276 aa4.35□□□□□ -1.71
DEPDC4-209ENST00000550587 TRGV2A0A075B6R0 118 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 TRBV6-5A0A0K0K1A5 114 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 GAGE12HA6NDE8 117 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms