RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 C11orf72Q8NBR9 251 aa15.23■□□□□ 0.03
PRDM4-205ENST00000550376 C21orf62-AS1Q17RA5 79 aa15.23■□□□□ 0.03
PRDM4-205ENST00000550376 ORMDL2Q53FV1 153 aa15.23■□□□□ 0.03
PRDM4-205ENST00000550376 MRPL35Q9NZE8 188 aaKnown RBP15.23■□□□□ 0.03
PRDM4-205ENST00000550376 DLEU1O43261 78 aa15.22■□□□□ 0.03
PRDM4-205ENST00000550376 ZC2HC1BQ5TFG8 222 aa15.22■□□□□ 0.03
PRDM4-205ENST00000550376 SLC25A34Q6PIV7 304 aa15.21■□□□□ 0.03
PRDM4-205ENST00000550376 C19orf73Q9NVV2 129 aa15.21■□□□□ 0.03
PRDM4-205ENST00000550376 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.21■□□□□ 0.02
PRDM4-205ENST00000550376 M0R2P5 195 aa15.21■□□□□ 0.02
PRDM4-205ENST00000550376 GIG44P09565 113 aaPredicted RBP15.21■□□□□ 0.02
PRDM4-205ENST00000550376 NDUFA11Q86Y39 141 aa15.21■□□□□ 0.02
PRDM4-205ENST00000550376 TOMM6Q96B49 74 aa15.21■□□□□ 0.02
PRDM4-205ENST00000550376 TTTY13Q9BZ97 58 aa15.21■□□□□ 0.02
PRDM4-205ENST00000550376 ATP5LO75964 103 aa15.2■□□□□ 0.02
PRDM4-205ENST00000550376 PPP1R17O96001 155 aa15.2■□□□□ 0.02
PRDM4-205ENST00000550376 ZNF415Q09FC8 603 aa15.2■□□□□ 0.02
PRDM4-205ENST00000550376 ZFP2Q6ZN57 461 aa15.2■□□□□ 0.02
PRDM4-205ENST00000550376 NMUP48645 174 aa15.19■□□□□ 0.02
PRDM4-205ENST00000550376 HHLA3Q9XRX5 114 aa15.19■□□□□ 0.02
PRDM4-205ENST00000550376 VCYO14598 125 aa15.19■□□□□ 0.02
PRDM4-205ENST00000550376 GTSCR1Q86UQ5 136 aa15.19■□□□□ 0.02
PRDM4-205ENST00000550376 PCP2Q8IVA1 136 aa15.19■□□□□ 0.02
PRDM4-205ENST00000550376 CRLF1O75462 422 aa15.18■□□□□ 0.02
PRDM4-205ENST00000550376 LINC00482Q8N8I6 264 aa15.18■□□□□ 0.02
PRDM4-205ENST00000550376 TP53TG1Q9Y2A0 90 aa15.18■□□□□ 0.02
PRDM4-205ENST00000550376 IGKV2D-26A0A0A0MRZ7 120 aa15.18■□□□□ 0.02
PRDM4-205ENST00000550376 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.18■□□□□ 0.02
PRDM4-205ENST00000550376 KIR2DL4Q99706 377 aa15.18■□□□□ 0.02
PRDM4-205ENST00000550376 BEAN1Q3B7T3 259 aa15.17■□□□□ 0.02
PRDM4-205ENST00000550376 CFAP126Q5VTH2 177 aa15.17■□□□□ 0.02
PRDM4-205ENST00000550376 IGKCP01834 107 aa15.17■□□□□ 0.02
PRDM4-205ENST00000550376 COX8AP10176 69 aa15.16■□□□□ 0.02
PRDM4-205ENST00000550376 ZMAT4Q9H898 229 aa15.16■□□□□ 0.02
PRDM4-205ENST00000550376 EMP1P54849 157 aa15.16■□□□□ 0.02
PRDM4-205ENST00000550376 MPV17L2Q567V2 206 aa15.16■□□□□ 0.02
PRDM4-205ENST00000550376 MRPS16Q9Y3D3 137 aaKnown RBP15.16■□□□□ 0.02
PRDM4-205ENST00000550376 TRBV27A0A0K0K1C4 114 aa15.15■□□□□ 0.02
PRDM4-205ENST00000550376 OPRPNQ99935 248 aaPredicted RBP15.15■□□□□ 0.02
PRDM4-205ENST00000550376 TSHBP01222 138 aa15.15■□□□□ 0.02
PRDM4-205ENST00000550376 Q6ZVH6 145 aa15.15■□□□□ 0.02
PRDM4-205ENST00000550376 BAALCQ8WXS3 180 aa15.15■□□□□ 0.02
PRDM4-205ENST00000550376 A0A087WX48 190 aa15.14■□□□□ 0.01
PRDM4-205ENST00000550376 TRGV1A0A0A0MS02 117 aa15.14■□□□□ 0.01
PRDM4-205ENST00000550376 DPM2O94777 84 aa15.14■□□□□ 0.01
PRDM4-205ENST00000550376 IGHV3-53P01767 116 aa15.14■□□□□ 0.01
PRDM4-205ENST00000550376 UFSP1Q6NVU6 142 aa15.14■□□□□ 0.01
PRDM4-205ENST00000550376 TRBV6-5A0A0K0K1A5 114 aa15.14■□□□□ 0.01
PRDM4-205ENST00000550376 FGF6P10767 208 aa15.14■□□□□ 0.01
PRDM4-205ENST00000550376 CLUHP3Q96NS8 147 aa15.14■□□□□ 0.01
PRDM4-205ENST00000550376 GAGE1Q13065 139 aa15.13■□□□□ 0.01
PRDM4-205ENST00000550376 CYSLTR1Q9Y271 337 aa15.13■□□□□ 0.01
PRDM4-205ENST00000550376 A8MWV9 139 aa15.12■□□□□ 0.01
PRDM4-205ENST00000550376 Q6ZTI0 123 aa15.12■□□□□ 0.01
PRDM4-205ENST00000550376 C2orf91Q6ZV80 131 aa15.12■□□□□ 0.01
PRDM4-205ENST00000550376 ERASQ7Z444 233 aa15.12■□□□□ 0.01
PRDM4-205ENST00000550376 NEXN-AS1Q8NBZ9 246 aa15.12■□□□□ 0.01
PRDM4-205ENST00000550376 PRSS29PA6NIE9 313 aa15.12■□□□□ 0.01
PRDM4-205ENST00000550376 CBY1Q9Y3M2 126 aa15.12■□□□□ 0.01
PRDM4-205ENST00000550376 FBN1P35555 2871 aaKnown RBP15.12■□□□□ 0.01
PRDM4-205ENST00000550376 IGHV3-38A0A0C4DH36 116 aa15.11■□□□□ 0.01
PRDM4-205ENST00000550376 RNASE8Q8TDE3 154 aaKnown RBP15.11■□□□□ 0.01
PRDM4-205ENST00000550376 K7EMI3 77 aa15.11■□□□□ 0.01
PRDM4-205ENST00000550376 NOP10Q9NPE3 64 aaKnown RBP15.11■□□□□ 0.01
PRDM4-205ENST00000550376 CHTOPQ9Y3Y2 248 aaKnown RBP15.11■□□□□ 0.01
PRDM4-205ENST00000550376 RPL32P62910 135 aaKnown RBP15.1■□□□□ 0.01
PRDM4-205ENST00000550376 IGIPA6NJ69 53 aa15.1■□□□□ 0.01
PRDM4-205ENST00000550376 LINC00467Q9BRT7 94 aa15.1■□□□□ 0.01
PRDM4-205ENST00000550376 PCP4P48539 62 aa15.09■□□□□ 0.01
PRDM4-205ENST00000550376 ZNF479Q96JC4 524 aa15.09■□□□□ 0.01
PRDM4-205ENST00000550376 STAB1Q9NY15 2570 aa15.09■□□□□ 0.01
PRDM4-205ENST00000550376 H7C1H1 209 aa15.09■□□□□ 0.01
PRDM4-205ENST00000550376 PHLDA1Q8WV24 401 aaPredicted RBP15.09■□□□□ 0.01
PRDM4-205ENST00000550376 SPXQ9BT56 116 aa15.09■□□□□ 0.01
PRDM4-205ENST00000550376 I3L3M4 83 aa15.08■□□□□ 0
PRDM4-205ENST00000550376 MRPL52Q86TS9 123 aaKnown RBP15.08■□□□□ 0
PRDM4-205ENST00000550376 TNFRSF18Q9Y5U5 241 aa15.08■□□□□ 0
PRDM4-205ENST00000550376 F8VRH5 84 aa15.07■□□□□ 0
PRDM4-205ENST00000550376 BOD1L2Q8IYS8 172 aa15.07■□□□□ 0
PRDM4-205ENST00000550376 CEMP1Q6PRD7 247 aaPredicted RBP15.07■□□□□ 0
PRDM4-205ENST00000550376 CSNK1G2-AS1Q8NCQ2 148 aa15.07■□□□□ 0
PRDM4-205ENST00000550376 COL5A1-AS1Q5SY13 56 aa15.06■□□□□ 0
PRDM4-205ENST00000550376 BAHCC1Q9P281 2608 aa15.06■□□□□ 0
PRDM4-205ENST00000550376 PKD1L1Q8TDX9 2849 aa15.06■□□□□ 0
PRDM4-205ENST00000550376 TRAV12-1A0A0B4J245 112 aa15.06■□□□□ 0
PRDM4-205ENST00000550376 TRAV8-6A0A0B4J262 113 aa15.06■□□□□ 0
PRDM4-205ENST00000550376 CMC4P56277 68 aaPredicted RBP15.06■□□□□ 0
PRDM4-205ENST00000550376 OR4C5Q8NGB2 326 aa15.06■□□□□ 0
PRDM4-205ENST00000550376 RS1O15537 224 aa15.05■□□□□ 0
PRDM4-205ENST00000550376 RIPPLY3P57055 190 aa15.05■□□□□ -0
PRDM4-205ENST00000550376 MAPKAPK5-AS1Q8N8E1 139 aa15.05■□□□□ -0
PRDM4-205ENST00000550376 TMEM263Q8WUH6 116 aaKnown RBP15.05■□□□□ -0
PRDM4-205ENST00000550376 PLAC8L1A1L4L8 177 aa15.04■□□□□ -0
PRDM4-205ENST00000550376 BVES-AS1Q5T3Y7 98 aa15.04■□□□□ -0
PRDM4-205ENST00000550376 IL17DQ8TAD2 202 aa15.04■□□□□ -0
PRDM4-205ENST00000550376 GAGE12BA1L429 117 aa15.03■□□□□ -0
PRDM4-205ENST00000550376 GAGE7O76087 117 aa15.03■□□□□ -0
PRDM4-205ENST00000550376 GAGE12FP0CL80 117 aa15.03■□□□□ -0
PRDM4-205ENST00000550376 GAGE12GP0CL81 117 aa15.03■□□□□ -0
PRDM4-205ENST00000550376 GAGE12IP0CL82 117 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms