RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 TRBV7-3A0A075B6L6 115 aa11.84□□□□□ -0.51
BRF1-217ENST00000550375 A0A1B0GW15 77 aa11.84□□□□□ -0.51
BRF1-217ENST00000550375 RHEBQ15382 184 aa11.84□□□□□ -0.51
BRF1-217ENST00000550375 RASL11AQ6T310 242 aa11.84□□□□□ -0.51
BRF1-217ENST00000550375 AMN1Q8IY45 258 aa11.84□□□□□ -0.51
BRF1-217ENST00000550375 GATD1Q8NB37 220 aa11.84□□□□□ -0.51
BRF1-217ENST00000550375 A0A1B0GXF2 115 aa11.83□□□□□ -0.52
BRF1-217ENST00000550375 UBE2D3P61077 147 aa11.83□□□□□ -0.52
BRF1-217ENST00000550375 UBE2D2P62837 147 aa11.83□□□□□ -0.52
BRF1-217ENST00000550375 HBBP68871 147 aa11.83□□□□□ -0.52
BRF1-217ENST00000550375 SVBPQ8N300 66 aa11.83□□□□□ -0.52
BRF1-217ENST00000550375 RNF185Q96GF1 192 aa11.83□□□□□ -0.52
BRF1-217ENST00000550375 GTSF1LQ9H1H1 148 aa11.83□□□□□ -0.52
BRF1-217ENST00000550375 TNFRSF18Q9Y5U5 241 aa11.83□□□□□ -0.52
BRF1-217ENST00000550375 IGLV2-18A0A075B6J9 118 aa11.82□□□□□ -0.52
BRF1-217ENST00000550375 IGHV3-38A0A0C4DH36 116 aa11.82□□□□□ -0.52
BRF1-217ENST00000550375 SNAPINO95295 136 aa11.82□□□□□ -0.52
BRF1-217ENST00000550375 RAB4AP20338 218 aa11.82□□□□□ -0.52
BRF1-217ENST00000550375 KCNIP4Q6PIL6 250 aa11.82□□□□□ -0.52
BRF1-217ENST00000550375 IMMP2LQ96T52 175 aa11.82□□□□□ -0.52
BRF1-217ENST00000550375 EPPK1P58107 5090 aaKnown RBP11.82□□□□□ -0.52
BRF1-217ENST00000550375 A0A087WWC5 75 aa11.81□□□□□ -0.52
BRF1-217ENST00000550375 S100A8P05109 93 aa11.81□□□□□ -0.52
BRF1-217ENST00000550375 ATP5L2Q7Z4Y8 100 aa11.81□□□□□ -0.52
BRF1-217ENST00000550375 RPL39LQ96EH5 51 aaKnown RBP11.81□□□□□ -0.52
BRF1-217ENST00000550375 BTF3L4Q96K17 158 aa11.81□□□□□ -0.52
BRF1-217ENST00000550375 DNAJC30Q96LL9 226 aa11.81□□□□□ -0.52
BRF1-217ENST00000550375 NIT2Q9NQR4 276 aa11.81□□□□□ -0.52
BRF1-217ENST00000550375 URGCP-MRPS24S4R325 110 aa11.81□□□□□ -0.52
BRF1-217ENST00000550375 GAS8-AS1O95177 125 aa11.8□□□□□ -0.52
BRF1-217ENST00000550375 TIRAPP58753 221 aa11.8□□□□□ -0.52
BRF1-217ENST00000550375 FAM104BQ5XKR9 115 aa11.8□□□□□ -0.52
BRF1-217ENST00000550375 UPK3BQ9BT76 320 aa11.8□□□□□ -0.52
BRF1-217ENST00000550375 Q9H8V8 135 aa11.8□□□□□ -0.52
BRF1-217ENST00000550375 TMEM242Q9NWH2 141 aa11.8□□□□□ -0.52
BRF1-217ENST00000550375 SMKR1H3BMG3 65 aa11.79□□□□□ -0.52
BRF1-217ENST00000550375 M0R2N4 97 aa11.79□□□□□ -0.52
BRF1-217ENST00000550375 S100PP25815 95 aa11.79□□□□□ -0.52
BRF1-217ENST00000550375 OR10J3Q5JRS4 329 aa11.79□□□□□ -0.52
BRF1-217ENST00000550375 DNAH6Q9C0G6 4158 aa11.79□□□□□ -0.52
BRF1-217ENST00000550375 NCR2O95944 276 aa11.79□□□□□ -0.52
BRF1-217ENST00000550375 MRPL51Q4U2R6 128 aaKnown RBP11.79□□□□□ -0.52
BRF1-217ENST00000550375 LELP1Q5T871 98 aa11.79□□□□□ -0.52
BRF1-217ENST00000550375 WFDC10BQ8IUB3 73 aa11.79□□□□□ -0.52
BRF1-217ENST00000550375 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.79□□□□□ -0.52
BRF1-217ENST00000550375 MRAP2Q96G30 205 aa11.79□□□□□ -0.52
BRF1-217ENST00000550375 KMT2AQ03164 3969 aa11.78□□□□□ -0.52
BRF1-217ENST00000550375 TRAV8-6A0A0B4J262 113 aa11.78□□□□□ -0.52
BRF1-217ENST00000550375 SIVA1O15304 175 aa11.78□□□□□ -0.52
BRF1-217ENST00000550375 RPS10P46783 165 aaKnown RBP11.77□□□□□ -0.53
BRF1-217ENST00000550375 DAZ4Q86SG3 579 aaKnown RBP11.77□□□□□ -0.53
BRF1-217ENST00000550375 DEFB104AQ8WTQ1 72 aa11.77□□□□□ -0.53
BRF1-217ENST00000550375 FRZBQ92765 325 aa11.77□□□□□ -0.53
BRF1-217ENST00000550375 DAZ3Q9NR90 486 aaKnown RBP11.77□□□□□ -0.53
BRF1-217ENST00000550375 TRAV9-1A0A075B6T8 112 aa11.76□□□□□ -0.53
BRF1-217ENST00000550375 ATRAIDQ6UW56 229 aa11.76□□□□□ -0.53
BRF1-217ENST00000550375 CKS2P33552 79 aa11.75□□□□□ -0.53
BRF1-217ENST00000550375 NBDYA0A0U1RRE5 68 aa11.74□□□□□ -0.53
BRF1-217ENST00000550375 ST20Q9HBF5 79 aa11.74□□□□□ -0.53
BRF1-217ENST00000550375 TRBV6-8A0A0A6YYG3 113 aa11.73□□□□□ -0.53
BRF1-217ENST00000550375 SDHAF1A6NFY7 115 aa11.73□□□□□ -0.53
BRF1-217ENST00000550375 D6R8Y8 96 aa11.73□□□□□ -0.53
BRF1-217ENST00000550375 NTM-AS1Q6ZSK4 140 aa11.73□□□□□ -0.53
BRF1-217ENST00000550375 BIRC6Q9NR09 4857 aa11.72□□□□□ -0.53
BRF1-217ENST00000550375 TRBV6-5A0A0K0K1A5 114 aa11.72□□□□□ -0.53
BRF1-217ENST00000550375 Q6ZR54 194 aa11.72□□□□□ -0.53
BRF1-217ENST00000550375 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
BRF1-217ENST00000550375 NRACQ8N912 160 aa11.72□□□□□ -0.53
BRF1-217ENST00000550375 TGIF2-C20orf24A0A0A6YYL0 155 aa11.71□□□□□ -0.53
BRF1-217ENST00000550375 IGHV3-30P01768 117 aa11.71□□□□□ -0.53
BRF1-217ENST00000550375 IGHV3-33P01772 117 aa11.71□□□□□ -0.53
BRF1-217ENST00000550375 DNAH10OSP0CZ25 163 aa11.71□□□□□ -0.53
BRF1-217ENST00000550375 IGHV3-30-3P0DP02 117 aa11.71□□□□□ -0.53
BRF1-217ENST00000550375 IGHV3-30-5P0DP03 117 aa11.71□□□□□ -0.53
BRF1-217ENST00000550375 TMEM97Q5BJF2 176 aa11.71□□□□□ -0.53
BRF1-217ENST00000550375 KRTAP1-5Q9BYS1 174 aa11.71□□□□□ -0.53
BRF1-217ENST00000550375 PPP1R17O96001 155 aa11.7□□□□□ -0.54
BRF1-217ENST00000550375 PMCHP20382 165 aa11.7□□□□□ -0.54
BRF1-217ENST00000550375 COTL1Q14019 142 aa11.7□□□□□ -0.54
BRF1-217ENST00000550375 Q8N3U1 123 aa11.7□□□□□ -0.54
BRF1-217ENST00000550375 CHCHD5Q9BSY4 110 aa11.7□□□□□ -0.54
BRF1-217ENST00000550375 TMEM70Q9BUB7 260 aa11.7□□□□□ -0.54
BRF1-217ENST00000550375 TRBV25-1A0A075B6N4 114 aa11.69□□□□□ -0.54
BRF1-217ENST00000550375 TNFRSF6BO95407 300 aa11.69□□□□□ -0.54
BRF1-217ENST00000550375 ELOBQ15370 118 aa11.69□□□□□ -0.54
BRF1-217ENST00000550375 TTC32Q5I0X7 151 aa11.69□□□□□ -0.54
BRF1-217ENST00000550375 TRAV9-2A0A087WT02 112 aa11.68□□□□□ -0.54
BRF1-217ENST00000550375 IGHV1-24A0A0C4DH33 117 aa11.68□□□□□ -0.54
BRF1-217ENST00000550375 TMEM262E9PQX1 116 aa11.68□□□□□ -0.54
BRF1-217ENST00000550375 I3L3M4 83 aa11.68□□□□□ -0.54
BRF1-217ENST00000550375 NPYP01303 97 aa11.68□□□□□ -0.54
BRF1-217ENST00000550375 PPBPP02775 128 aa11.68□□□□□ -0.54
BRF1-217ENST00000550375 POLR2KP53803 58 aaKnown RBP11.68□□□□□ -0.54
BRF1-217ENST00000550375 SUMO2P61956 95 aaKnown RBP11.68□□□□□ -0.54
BRF1-217ENST00000550375 LINC01556Q5JQF7 62 aa11.68□□□□□ -0.54
BRF1-217ENST00000550375 ORMDL3Q8N138 153 aa11.68□□□□□ -0.54
BRF1-217ENST00000550375 PRELID3AQ96N28 172 aa11.68□□□□□ -0.54
BRF1-217ENST00000550375 APCSP02743 223 aa11.67□□□□□ -0.54
BRF1-217ENST00000550375 AMTP48728 403 aa11.67□□□□□ -0.54
BRF1-217ENST00000550375 NIT1Q86X76 327 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms