RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 ELOBQ15370 118 aa12.1□□□□□ -0.47
CHERP-204ENST00000546538 KRTAP26-1Q6PEX3 210 aa12.1□□□□□ -0.47
CHERP-204ENST00000546538 Q0VG73 95 aa12.09□□□□□ -0.47
CHERP-204ENST00000546538 DEFB104AQ8WTQ1 72 aa12.09□□□□□ -0.47
CHERP-204ENST00000546538 DERL1Q9BUN8 251 aa12.09□□□□□ -0.47
CHERP-204ENST00000546538 ZNF471Q9BX82 626 aaPredicted RBP12.09□□□□□ -0.47
CHERP-204ENST00000546538 S100A9P06702 114 aaKnown RBP12.08□□□□□ -0.48
CHERP-204ENST00000546538 SSTP61278 116 aa12.08□□□□□ -0.48
CHERP-204ENST00000546538 CCL20P78556 96 aa12.08□□□□□ -0.48
CHERP-204ENST00000546538 C1orf43Q9BWL3 253 aa12.08□□□□□ -0.48
CHERP-204ENST00000546538 VAX2Q9UIW0 290 aa12.08□□□□□ -0.48
CHERP-204ENST00000546538 UMAD1C9J7I0 102 aa12.07□□□□□ -0.48
CHERP-204ENST00000546538 TMUB2Q71RG4 321 aa12.07□□□□□ -0.48
CHERP-204ENST00000546538 HMSDA8MTL9 139 aa12.06□□□□□ -0.48
CHERP-204ENST00000546538 USP17L23D6RBM5 183 aa12.06□□□□□ -0.48
CHERP-204ENST00000546538 RPL35P42766 123 aaKnown RBP12.06□□□□□ -0.48
CHERP-204ENST00000546538 BCL2L11O43521 198 aa12.05□□□□□ -0.48
CHERP-204ENST00000546538 IGLV2-8P01709 118 aa12.05□□□□□ -0.48
CHERP-204ENST00000546538 ANGP03950 147 aaKnown RBP12.05□□□□□ -0.48
CHERP-204ENST00000546538 PRSS1P07477 247 aa12.05□□□□□ -0.48
CHERP-204ENST00000546538 GZMBP10144 247 aa12.05□□□□□ -0.48
CHERP-204ENST00000546538 SPANXN1Q5VSR9 72 aa12.05□□□□□ -0.48
CHERP-204ENST00000546538 KCNIP4Q6PIL6 250 aa12.05□□□□□ -0.48
CHERP-204ENST00000546538 CHCHD5Q9BSY4 110 aa12.05□□□□□ -0.48
CHERP-204ENST00000546538 PRR34Q9NV39 138 aa12.05□□□□□ -0.48
CHERP-204ENST00000546538 H2AFB1P0C5Y9 115 aa12.04□□□□□ -0.48
CHERP-204ENST00000546538 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
CHERP-204ENST00000546538 F5H697 171 aa12.03□□□□□ -0.48
CHERP-204ENST00000546538 PANO1I0J062 215 aa12.03□□□□□ -0.48
CHERP-204ENST00000546538 HLA-DQA1P01909 254 aa12.03□□□□□ -0.48
CHERP-204ENST00000546538 CRPP02741 224 aa12.03□□□□□ -0.48
CHERP-204ENST00000546538 IGLC6P0CF74 106 aa12.03□□□□□ -0.48
CHERP-204ENST00000546538 RBX1P62877 108 aa12.03□□□□□ -0.48
CHERP-204ENST00000546538 GAGE6Q13070 117 aa12.03□□□□□ -0.48
CHERP-204ENST00000546538 TCTE3Q8IZS6 198 aa12.03□□□□□ -0.48
CHERP-204ENST00000546538 C11orf52Q96A22 123 aa12.03□□□□□ -0.48
CHERP-204ENST00000546538 M0QY20 66 aa12.03□□□□□ -0.48
CHERP-204ENST00000546538 HNRNPA3P51991 378 aaKnown RBP12.03□□□□□ -0.48
CHERP-204ENST00000546538 A0A0D9SG52 128 aa12.02□□□□□ -0.49
CHERP-204ENST00000546538 MIAQ16674 131 aa12.02□□□□□ -0.49
CHERP-204ENST00000546538 C14orf177Q52M58 125 aa12.02□□□□□ -0.49
CHERP-204ENST00000546538 LINC00269Q8N2A0 174 aa12.02□□□□□ -0.49
CHERP-204ENST00000546538 UBR4Q5T4S7 5183 aa12.01□□□□□ -0.49
CHERP-204ENST00000546538 CENPWQ5EE01 88 aa12.01□□□□□ -0.49
CHERP-204ENST00000546538 AP1S3Q96PC3 154 aa12.01□□□□□ -0.49
CHERP-204ENST00000546538 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.01□□□□□ -0.49
CHERP-204ENST00000546538 KANTRA0A1W2PQU2 76 aa12□□□□□ -0.49
CHERP-204ENST00000546538 C19orf71A6NCJ1 209 aa12□□□□□ -0.49
CHERP-204ENST00000546538 IQCJQ1A5X6 159 aa12□□□□□ -0.49
CHERP-204ENST00000546538 SUMO4Q6EEV6 95 aa12□□□□□ -0.49
CHERP-204ENST00000546538 GFRA4Q9GZZ7 299 aa12□□□□□ -0.49
CHERP-204ENST00000546538 GNG13Q9P2W3 67 aa12□□□□□ -0.49
CHERP-204ENST00000546538 RAB19A4D1S5 217 aa11.99□□□□□ -0.49
CHERP-204ENST00000546538 TRBV20OR9-2A0A075B6H5 130 aa11.98□□□□□ -0.49
CHERP-204ENST00000546538 TRAV1-1A0A0B4J248 108 aa11.98□□□□□ -0.49
CHERP-204ENST00000546538 C9orf163Q8N9P6 203 aa11.98□□□□□ -0.49
CHERP-204ENST00000546538 C20orf203Q8NBC4 194 aa11.98□□□□□ -0.49
CHERP-204ENST00000546538 DAZAP1Q96EP5 407 aaKnown RBP11.98□□□□□ -0.49
CHERP-204ENST00000546538 TRBV25-1A0A075B6N4 114 aa11.97□□□□□ -0.49
CHERP-204ENST00000546538 MGPP08493 103 aa11.97□□□□□ -0.49
CHERP-204ENST00000546538 TMEM97Q5BJF2 176 aa11.97□□□□□ -0.49
CHERP-204ENST00000546538 FER1L6-AS1Q8NA97 138 aa11.97□□□□□ -0.49
CHERP-204ENST00000546538 OR2D3Q8NGH3 330 aa11.97□□□□□ -0.49
CHERP-204ENST00000546538 TPPP3Q9BW30 176 aa11.97□□□□□ -0.49
CHERP-204ENST00000546538 MANBALQ9NQG1 85 aa11.97□□□□□ -0.49
CHERP-204ENST00000546538 IGLV10-54A0A075B6I4 117 aa11.96□□□□□ -0.49
CHERP-204ENST00000546538 SMIM17P0DL12 118 aa11.96□□□□□ -0.49
CHERP-204ENST00000546538 PKIAP61925 76 aa11.96□□□□□ -0.49
CHERP-204ENST00000546538 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.49
CHERP-204ENST00000546538 SDIM1Q6ZPB5 146 aa11.96□□□□□ -0.49
CHERP-204ENST00000546538 IGLV4-60A0A075B6I1 120 aa11.95□□□□□ -0.5
CHERP-204ENST00000546538 IGHV1-24A0A0C4DH33 117 aa11.95□□□□□ -0.5
CHERP-204ENST00000546538 NKX2-5P52952 324 aaPredicted RBP11.95□□□□□ -0.5
CHERP-204ENST00000546538 OXTP01178 125 aa11.94□□□□□ -0.5
CHERP-204ENST00000546538 SLPIP03973 132 aa11.94□□□□□ -0.5
CHERP-204ENST00000546538 REG3AQ06141 175 aa11.94□□□□□ -0.5
CHERP-204ENST00000546538 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.94□□□□□ -0.5
CHERP-204ENST00000546538 RPL37AP61513 92 aaKnown RBP11.94□□□□□ -0.5
CHERP-204ENST00000546538 EIF5AP63241 154 aaKnown RBP11.93□□□□□ -0.5
CHERP-204ENST00000546538 LYZL1Q6UWQ5 148 aa11.93□□□□□ -0.5
CHERP-204ENST00000546538 GNG4P50150 75 aa11.92□□□□□ -0.5
CHERP-204ENST00000546538 RPS20P60866 119 aaKnown RBP11.92□□□□□ -0.5
CHERP-204ENST00000546538 CACNG7P62955 275 aa11.92□□□□□ -0.5
CHERP-204ENST00000546538 A0A1B0GUV1 79 aa11.91□□□□□ -0.5
CHERP-204ENST00000546538 CNBPP62633 177 aaKnown RBP11.91□□□□□ -0.5
CHERP-204ENST00000546538 MEF2BQ02080 365 aaPredicted RBP11.91□□□□□ -0.5
CHERP-204ENST00000546538 CIRBPQ14011 172 aaKnown RBP11.91□□□□□ -0.5
CHERP-204ENST00000546538 RASL11AQ6T310 242 aa11.91□□□□□ -0.5
CHERP-204ENST00000546538 TNXBP22105 4242 aa11.91□□□□□ -0.5
CHERP-204ENST00000546538 H7C1H1 209 aa11.9□□□□□ -0.5
CHERP-204ENST00000546538 NTF3P20783 257 aa11.9□□□□□ -0.5
CHERP-204ENST00000546538 SULT1A2P50226 295 aa11.9□□□□□ -0.5
CHERP-204ENST00000546538 SMIM12Q96EX1 92 aa11.9□□□□□ -0.5
CHERP-204ENST00000546538 TMEM243Q9BU79 118 aa11.9□□□□□ -0.5
CHERP-204ENST00000546538 P01737 135 aa11.89□□□□□ -0.51
CHERP-204ENST00000546538 CTRLP40313 264 aa11.89□□□□□ -0.51
CHERP-204ENST00000546538 RAB5CP51148 216 aa11.89□□□□□ -0.51
CHERP-204ENST00000546538 C9orf62Q8N4C0 152 aa11.89□□□□□ -0.51
CHERP-204ENST00000546538 PGLYRP4Q96LB8 373 aa11.89□□□□□ -0.51
CHERP-204ENST00000546538 NIT2Q9NQR4 276 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms