RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 GAGE4Q13068 117 aa11.9□□□□□ -0.5
CADM1-220ENST00000546000 GAGE5Q13069 117 aa11.9□□□□□ -0.5
CADM1-220ENST00000546000 GAGE13Q4V321 117 aa11.9□□□□□ -0.5
CADM1-220ENST00000546000 PRO0255Q9UI72 69 aa11.9□□□□□ -0.5
CADM1-220ENST00000546000 STARD9Q9P2P6 4700 aa11.89□□□□□ -0.51
CADM1-220ENST00000546000 GYPEP15421 78 aa11.89□□□□□ -0.51
CADM1-220ENST00000546000 RHOHQ15669 191 aa11.89□□□□□ -0.51
CADM1-220ENST00000546000 OR10J3Q5JRS4 329 aa11.89□□□□□ -0.51
CADM1-220ENST00000546000 NEGR1Q7Z3B1 354 aa11.89□□□□□ -0.51
CADM1-220ENST00000546000 DEFB104AQ8WTQ1 72 aa11.89□□□□□ -0.51
CADM1-220ENST00000546000 PRELID3AQ96N28 172 aa11.89□□□□□ -0.51
CADM1-220ENST00000546000 A0A096LPF7 62 aa11.88□□□□□ -0.51
CADM1-220ENST00000546000 TRBV6-4A0A1B0GX49 114 aa11.88□□□□□ -0.51
CADM1-220ENST00000546000 CIDEAO60543 219 aa11.88□□□□□ -0.51
CADM1-220ENST00000546000 SRIP30626 198 aa11.88□□□□□ -0.51
CADM1-220ENST00000546000 ZFAND6Q6FIF0 208 aa11.88□□□□□ -0.51
CADM1-220ENST00000546000 ORMDL3Q8N138 153 aa11.88□□□□□ -0.51
CADM1-220ENST00000546000 TNFRSF6BO95407 300 aa11.87□□□□□ -0.51
CADM1-220ENST00000546000 IQCJQ1A5X6 159 aa11.87□□□□□ -0.51
CADM1-220ENST00000546000 PRADC1Q9BSG0 188 aa11.87□□□□□ -0.51
CADM1-220ENST00000546000 ALKBH7Q9BT30 221 aaPredicted RBP11.87□□□□□ -0.51
CADM1-220ENST00000546000 IGHV3-38A0A0C4DH36 116 aa11.86□□□□□ -0.51
CADM1-220ENST00000546000 LINC00694P0DN24 101 aa11.86□□□□□ -0.51
CADM1-220ENST00000546000 ZNRF2Q8NHG8 242 aa11.86□□□□□ -0.51
CADM1-220ENST00000546000 H7C1H1 209 aa11.85□□□□□ -0.51
CADM1-220ENST00000546000 NIT2Q9NQR4 276 aa11.85□□□□□ -0.51
CADM1-220ENST00000546000 KMT2CQ8NEZ4 4911 aaKnown RBP11.84□□□□□ -0.51
CADM1-220ENST00000546000 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
CADM1-220ENST00000546000 LOC389332A0A1B0GUA5 103 aa11.84□□□□□ -0.51
CADM1-220ENST00000546000 IGLL5B9A064 214 aa11.84□□□□□ -0.51
CADM1-220ENST00000546000 NUDT3O95989 172 aa11.83□□□□□ -0.52
CADM1-220ENST00000546000 PPBPP02775 128 aa11.83□□□□□ -0.52
CADM1-220ENST00000546000 UBE2D3P61077 147 aa11.83□□□□□ -0.52
CADM1-220ENST00000546000 UBE2D2P62837 147 aa11.83□□□□□ -0.52
CADM1-220ENST00000546000 RPL36AP83881 106 aaKnown RBP11.83□□□□□ -0.52
CADM1-220ENST00000546000 CEMP1Q6PRD7 247 aaPredicted RBP11.83□□□□□ -0.52
CADM1-220ENST00000546000 RPL36ALQ969Q0 106 aaKnown RBP11.83□□□□□ -0.52
CADM1-220ENST00000546000 ST20Q9HBF5 79 aa11.83□□□□□ -0.52
CADM1-220ENST00000546000 TNFRSF18Q9Y5U5 241 aa11.83□□□□□ -0.52
CADM1-220ENST00000546000 CSMD3Q7Z407 3707 aa11.83□□□□□ -0.52
CADM1-220ENST00000546000 PLECQ15149 4684 aaKnown RBP11.83□□□□□ -0.52
CADM1-220ENST00000546000 TRBV6-5A0A0K0K1A5 114 aa11.82□□□□□ -0.52
CADM1-220ENST00000546000 SDHAF1A6NFY7 115 aa11.82□□□□□ -0.52
CADM1-220ENST00000546000 WWC2-AS2Q96NR7 200 aa11.82□□□□□ -0.52
CADM1-220ENST00000546000 TMEM70Q9BUB7 260 aa11.82□□□□□ -0.52
CADM1-220ENST00000546000 ICOSQ9Y6W8 199 aa11.82□□□□□ -0.52
CADM1-220ENST00000546000 TRBV7-3A0A075B6L6 115 aa11.81□□□□□ -0.52
CADM1-220ENST00000546000 SUMO2P61956 95 aaKnown RBP11.81□□□□□ -0.52
CADM1-220ENST00000546000 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
CADM1-220ENST00000546000 DNAJC30Q96LL9 226 aa11.81□□□□□ -0.52
CADM1-220ENST00000546000 MUC7Q8TAX7 377 aa11.8□□□□□ -0.52
CADM1-220ENST00000546000 SMIM2Q9BVW6 85 aa11.8□□□□□ -0.52
CADM1-220ENST00000546000 MAP1LC3AQ9H492 121 aa11.8□□□□□ -0.52
CADM1-220ENST00000546000 NUPR2A6NF83 97 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 HIST1H2BKO60814 126 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 HIST1H2BJP06899 126 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 HIST1H2BOP23527 126 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 HIST1H2BBP33778 126 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 POLR2KP53803 58 aaKnown RBP11.79□□□□□ -0.52
CADM1-220ENST00000546000 HIST1H2BDP58876 126 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 HIST1H2BCP62807 126 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 HIST2H2BEQ16778 126 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.79□□□□□ -0.52
CADM1-220ENST00000546000 HIST1H2BHQ93079 126 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 HIST1H2BNQ99877 126 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 HIST1H2BMQ99879 126 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 LAMTOR2Q9Y2Q5 125 aa11.79□□□□□ -0.52
CADM1-220ENST00000546000 IGLV2-18A0A075B6J9 118 aa11.78□□□□□ -0.52
CADM1-220ENST00000546000 C1orf196B1AJZ1 125 aa11.78□□□□□ -0.52
CADM1-220ENST00000546000 H3BNG1 76 aa11.78□□□□□ -0.52
CADM1-220ENST00000546000 IFI27P40305 119 aaPredicted RBP11.78□□□□□ -0.52
CADM1-220ENST00000546000 ATP6V0E2Q8NHE4 81 aa11.78□□□□□ -0.52
CADM1-220ENST00000546000 URB1-AS1Q96HZ7 61 aa11.78□□□□□ -0.52
CADM1-220ENST00000546000 C20orf78Q9BR46 151 aa11.78□□□□□ -0.52
CADM1-220ENST00000546000 TCAPO15273 167 aa11.77□□□□□ -0.53
CADM1-220ENST00000546000 PPP1R17O96001 155 aa11.77□□□□□ -0.53
CADM1-220ENST00000546000 TSHBP01222 138 aa11.77□□□□□ -0.53
CADM1-220ENST00000546000 MRPL23Q16540 153 aaKnown RBP11.77□□□□□ -0.53
CADM1-220ENST00000546000 PMCHP20382 165 aa11.76□□□□□ -0.53
CADM1-220ENST00000546000 NTM-AS1Q6ZSK4 140 aa11.76□□□□□ -0.53
CADM1-220ENST00000546000 APLNQ9ULZ1 77 aa11.76□□□□□ -0.53
CADM1-220ENST00000546000 TRBV27A0A0K0K1C4 114 aa11.75□□□□□ -0.53
CADM1-220ENST00000546000 LINC00310P59036 64 aa11.75□□□□□ -0.53
CADM1-220ENST00000546000 Q8N8P6 123 aa11.75□□□□□ -0.53
CADM1-220ENST00000546000 C15orf53Q8NAA6 179 aa11.75□□□□□ -0.53
CADM1-220ENST00000546000 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
CADM1-220ENST00000546000 I3L3M4 83 aa11.74□□□□□ -0.53
CADM1-220ENST00000546000 RPL32P62910 135 aaKnown RBP11.74□□□□□ -0.53
CADM1-220ENST00000546000 RNASEKQ6P5S7 137 aaKnown RBP11.74□□□□□ -0.53
CADM1-220ENST00000546000 DAZ4Q86SG3 579 aaKnown RBP11.74□□□□□ -0.53
CADM1-220ENST00000546000 PRSS3P2Q8NHM4 247 aa11.74□□□□□ -0.53
CADM1-220ENST00000546000 DAZ3Q9NR90 486 aaKnown RBP11.74□□□□□ -0.53
CADM1-220ENST00000546000 KLK5Q9Y337 293 aaPredicted RBP11.74□□□□□ -0.53
CADM1-220ENST00000546000 VCYO14598 125 aa11.73□□□□□ -0.53
CADM1-220ENST00000546000 COTL1Q14019 142 aa11.73□□□□□ -0.53
CADM1-220ENST00000546000 ESRGQ1W209 222 aa11.73□□□□□ -0.53
CADM1-220ENST00000546000 SERF1AO75920 110 aa11.72□□□□□ -0.53
CADM1-220ENST00000546000 Q0VG73 95 aa11.72□□□□□ -0.53
CADM1-220ENST00000546000 LYPD5Q6UWN5 251 aa11.72□□□□□ -0.53
CADM1-220ENST00000546000 FA2HQ7L5A8 372 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms