RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 TMEM97Q5BJF2 176 aa8.93□□□□□ -0.98
DDX55-213ENST00000545042 FAM231DQ6ZW35 169 aa8.93□□□□□ -0.98
DDX55-213ENST00000545042 A0A087WX48 190 aa8.92□□□□□ -0.98
DDX55-213ENST00000545042 TRAV8-3A0A0A6YYJ7 113 aa8.92□□□□□ -0.98
DDX55-213ENST00000545042 SRP19P09132 144 aaKnown RBP8.92□□□□□ -0.98
DDX55-213ENST00000545042 SMIM15Q7Z3B0 74 aa8.92□□□□□ -0.98
DDX55-213ENST00000545042 DAZ4Q86SG3 579 aaKnown RBP8.92□□□□□ -0.98
DDX55-213ENST00000545042 NIT1Q86X76 327 aa8.92□□□□□ -0.98
DDX55-213ENST00000545042 DNAJC30Q96LL9 226 aa8.92□□□□□ -0.98
DDX55-213ENST00000545042 TM2D2Q9BX73 214 aa8.92□□□□□ -0.98
DDX55-213ENST00000545042 DPH3P1Q9H4G8 78 aa8.92□□□□□ -0.98
DDX55-213ENST00000545042 DAZ3Q9NR90 486 aaKnown RBP8.92□□□□□ -0.98
DDX55-213ENST00000545042 PGPEP1Q9NXJ5 209 aa8.92□□□□□ -0.98
DDX55-213ENST00000545042 HERC2O95714 4834 aa8.92□□□□□ -0.98
DDX55-213ENST00000545042 A0A087WTM6 91 aa8.91□□□□□ -0.98
DDX55-213ENST00000545042 TRBV6-8A0A0A6YYG3 113 aa8.91□□□□□ -0.98
DDX55-213ENST00000545042 PKIAP61925 76 aa8.91□□□□□ -0.98
DDX55-213ENST00000545042 ELOBQ15370 118 aa8.91□□□□□ -0.98
DDX55-213ENST00000545042 FAM74A3Q4VXF1 159 aa8.91□□□□□ -0.98
DDX55-213ENST00000545042 CHCHD7Q9BUK0 85 aa8.91□□□□□ -0.98
DDX55-213ENST00000545042 CNFNQ9BYD5 112 aa8.91□□□□□ -0.98
DDX55-213ENST00000545042 DNAH11Q96DT5 4516 aa8.91□□□□□ -0.98
DDX55-213ENST00000545042 TMEM262E9PQX1 116 aa8.9□□□□□ -0.98
DDX55-213ENST00000545042 M0QY20 66 aa8.9□□□□□ -0.98
DDX55-213ENST00000545042 KRTAP10-2P60368 255 aa8.9□□□□□ -0.98
DDX55-213ENST00000545042 PEA15Q15121 130 aa8.9□□□□□ -0.98
DDX55-213ENST00000545042 CT83Q5H943 113 aa8.9□□□□□ -0.98
DDX55-213ENST00000545042 SUMO4Q6EEV6 95 aa8.9□□□□□ -0.98
DDX55-213ENST00000545042 CDPF1Q6NVV7 123 aa8.9□□□□□ -0.98
DDX55-213ENST00000545042 LINC01551Q86U37 167 aa8.9□□□□□ -0.98
DDX55-213ENST00000545042 Q8N3U1 123 aa8.9□□□□□ -0.98
DDX55-213ENST00000545042 BORCS7Q96B45 105 aa8.9□□□□□ -0.98
DDX55-213ENST00000545042 DYNC1H1Q14204 4646 aaKnown RBP8.9□□□□□ -0.99
DDX55-213ENST00000545042 TMEM241Q24JQ0 296 aa8.89□□□□□ -0.99
DDX55-213ENST00000545042 RASL11AQ6T310 242 aa8.89□□□□□ -0.99
DDX55-213ENST00000545042 C15orf54Q8N8G6 183 aa8.89□□□□□ -0.99
DDX55-213ENST00000545042 GTSF1Q8WW33 167 aa8.89□□□□□ -0.99
DDX55-213ENST00000545042 RMI2Q96E14 147 aa8.89□□□□□ -0.99
DDX55-213ENST00000545042 PGLYRP4Q96LB8 373 aa8.89□□□□□ -0.99
DDX55-213ENST00000545042 CHCHD5Q9BSY4 110 aa8.89□□□□□ -0.99
DDX55-213ENST00000545042 SMDT1Q9H4I9 107 aa8.89□□□□□ -0.99
DDX55-213ENST00000545042 COX11Q9Y6N1 276 aa8.89□□□□□ -0.99
DDX55-213ENST00000545042 NIT2Q9NQR4 276 aa8.88□□□□□ -0.99
DDX55-213ENST00000545042 OSTCQ9NRP0 149 aa8.88□□□□□ -0.99
DDX55-213ENST00000545042 KLK12Q9UKR0 248 aa8.88□□□□□ -0.99
DDX55-213ENST00000545042 TRBV25-1A0A075B6N4 114 aa8.87□□□□□ -0.99
DDX55-213ENST00000545042 TSKUQ8WUA8 353 aa8.87□□□□□ -0.99
DDX55-213ENST00000545042 GFRA4Q9GZZ7 299 aa8.87□□□□□ -0.99
DDX55-213ENST00000545042 IGHV1-24A0A0C4DH33 117 aa8.86□□□□□ -0.99
DDX55-213ENST00000545042 FAM231BA6NCW3 169 aa8.86□□□□□ -0.99
DDX55-213ENST00000545042 CDK2AP2O75956 126 aa8.86□□□□□ -0.99
DDX55-213ENST00000545042 FOXA3P55318 350 aaPredicted RBP8.86□□□□□ -0.99
DDX55-213ENST00000545042 Q0VG73 95 aa8.86□□□□□ -0.99
DDX55-213ENST00000545042 FRZBQ92765 325 aa8.86□□□□□ -0.99
DDX55-213ENST00000545042 UBE2WQ96B02 151 aa8.86□□□□□ -0.99
DDX55-213ENST00000545042 NAT8Q9UHE5 227 aa8.86□□□□□ -0.99
DDX55-213ENST00000545042 KIAA1109Q2LD37 5005 aa8.86□□□□□ -0.99
DDX55-213ENST00000545042 HIGD1CA8MV81 97 aa8.85□□□□□ -0.99
DDX55-213ENST00000545042 CRPP02741 224 aa8.85□□□□□ -0.99
DDX55-213ENST00000545042 RAB14P61106 215 aa8.85□□□□□ -0.99
DDX55-213ENST00000545042 ADIRFQ15847 76 aa8.85□□□□□ -0.99
DDX55-213ENST00000545042 NTM-AS1Q6ZSK4 140 aa8.85□□□□□ -0.99
DDX55-213ENST00000545042 ISOC2Q96AB3 205 aa8.85□□□□□ -0.99
DDX55-213ENST00000545042 IGKV2D-24A0A075B6R9 120 aa8.84□□□□□ -0.99
DDX55-213ENST00000545042 A0A1B0GUT8 65 aa8.84□□□□□ -0.99
DDX55-213ENST00000545042 LRCOL1A6NCL2 159 aa8.84□□□□□ -0.99
DDX55-213ENST00000545042 C9JQL5 133 aa8.84□□□□□ -0.99
DDX55-213ENST00000545042 ANGP03950 147 aaKnown RBP8.84□□□□□ -0.99
DDX55-213ENST00000545042 RPL23P62829 140 aaKnown RBP8.84□□□□□ -0.99
DDX55-213ENST00000545042 IQCJQ1A5X6 159 aa8.84□□□□□ -0.99
DDX55-213ENST00000545042 MPV17L2Q567V2 206 aa8.84□□□□□ -0.99
DDX55-213ENST00000545042 NTN5Q8WTR8 489 aaPredicted RBP8.84□□□□□ -0.99
DDX55-213ENST00000545042 FUSP35637 526 aaKnown RBP eCLIP8.83□□□□□ -1
DDX55-213ENST00000545042 SRSF3P84103 164 aaKnown RBP8.83□□□□□ -1
DDX55-213ENST00000545042 GAGE6Q13070 117 aa8.83□□□□□ -1
DDX55-213ENST00000545042 COTL1Q14019 142 aa8.83□□□□□ -1
DDX55-213ENST00000545042 Q8N814 137 aa8.83□□□□□ -1
DDX55-213ENST00000545042 GATD1Q8NB37 220 aa8.83□□□□□ -1
DDX55-213ENST00000545042 V9GYV3 84 aa8.83□□□□□ -1
DDX55-213ENST00000545042 IGLV5-52A0A0A0MRZ9 124 aa8.82□□□□□ -1
DDX55-213ENST00000545042 TRAV26-2A0A0B4J265 109 aa8.82□□□□□ -1
DDX55-213ENST00000545042 RIGQ13278 110 aa8.82□□□□□ -1
DDX55-213ENST00000545042 ATRAIDQ6UW56 229 aa8.82□□□□□ -1
DDX55-213ENST00000545042 TMEM243Q9BU79 118 aa8.82□□□□□ -1
DDX55-213ENST00000545042 C1orf43Q9BWL3 253 aa8.82□□□□□ -1
DDX55-213ENST00000545042 UBE2L6O14933 153 aa8.81□□□□□ -1
DDX55-213ENST00000545042 GCSHP23434 173 aa8.81□□□□□ -1
DDX55-213ENST00000545042 RBX1P62877 108 aa8.81□□□□□ -1
DDX55-213ENST00000545042 Q8N976 141 aa8.81□□□□□ -1
DDX55-213ENST00000545042 TMEM191AQ9H0A3 160 aa8.81□□□□□ -1
DDX55-213ENST00000545042 NAT8BQ9UHF3 227 aa8.81□□□□□ -1
DDX55-213ENST00000545042 LRP1BQ9NZR2 4599 aa8.8□□□□□ -1
DDX55-213ENST00000545042 AMTP48728 403 aa8.8□□□□□ -1
DDX55-213ENST00000545042 MIAQ16674 131 aa8.8□□□□□ -1
DDX55-213ENST00000545042 NUP35Q8NFH5 326 aa8.8□□□□□ -1
DDX55-213ENST00000545042 BAALCQ8WXS3 180 aa8.8□□□□□ -1
DDX55-213ENST00000545042 RPL39LQ96EH5 51 aaKnown RBP8.8□□□□□ -1
DDX55-213ENST00000545042 LECT2O14960 151 aa8.79□□□□□ -1
DDX55-213ENST00000545042 ENHOQ6UWT2 76 aa8.79□□□□□ -1
DDX55-213ENST00000545042 SDHAF1A6NFY7 115 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms