RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 HHLA3Q9XRX5 114 aa7.53□□□□□ -1.2
DDB1-221ENST00000543162 TMA7Q9Y2S6 64 aaKnown RBP7.53□□□□□ -1.2
DDB1-221ENST00000543162 TRBV10-1A0A0K0K1A3 114 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 P0DMU3 169 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 FAM231AP0DMU4 169 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 FAM231CP0DMU5 169 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 RHOHQ15669 191 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 Q6ZTC4 211 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 C18orf32Q8TCD1 76 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 DNAJC30Q96LL9 226 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 C20orf78Q9BR46 151 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 PRADC1Q9BSG0 188 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 ST20Q9HBF5 79 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 PRO0255Q9UI72 69 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
DDB1-221ENST00000543162 TRBV6-5A0A0K0K1A5 114 aa7.51□□□□□ -1.21
DDB1-221ENST00000543162 LOC389332A0A1B0GUA5 103 aa7.51□□□□□ -1.21
DDB1-221ENST00000543162 PAX4O43316 350 aa7.51□□□□□ -1.21
DDB1-221ENST00000543162 CRYBA4P53673 196 aa7.51□□□□□ -1.21
DDB1-221ENST00000543162 SUMO2P61956 95 aaKnown RBP7.51□□□□□ -1.21
DDB1-221ENST00000543162 RPL36AP83881 106 aaKnown RBP7.51□□□□□ -1.21
DDB1-221ENST00000543162 Q0VG73 95 aa7.51□□□□□ -1.21
DDB1-221ENST00000543162 IQCJQ1A5X6 159 aa7.51□□□□□ -1.21
DDB1-221ENST00000543162 BAGE3Q86Y29 109 aa7.51□□□□□ -1.21
DDB1-221ENST00000543162 NEXN-AS1Q8NBZ9 246 aa7.51□□□□□ -1.21
DDB1-221ENST00000543162 RPL36ALQ969Q0 106 aaKnown RBP7.51□□□□□ -1.21
DDB1-221ENST00000543162 Q9UF83 564 aa7.51□□□□□ -1.21
DDB1-221ENST00000543162 PMCHP20382 165 aa7.5□□□□□ -1.21
DDB1-221ENST00000543162 NDUFA6P56556 154 aa7.5□□□□□ -1.21
DDB1-221ENST00000543162 ZNRF2Q8NHG8 242 aa7.5□□□□□ -1.21
DDB1-221ENST00000543162 PRSS3P2Q8NHM4 247 aa7.5□□□□□ -1.21
DDB1-221ENST00000543162 SMIM2Q9BVW6 85 aa7.5□□□□□ -1.21
DDB1-221ENST00000543162 NXT2Q9NPJ8 142 aaKnown RBP7.5□□□□□ -1.21
DDB1-221ENST00000543162 TRBV7-3A0A075B6L6 115 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 TRAV26-1A0A087WT03 109 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 DEFB131BA0A096LNP1 70 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 TRAV10A0A0B4J240 114 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 A0A0J9YY99 117 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 LOC100131303A0A0U1RQF7 123 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 GAGE12JA6NER3 117 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 SDHAF1A6NFY7 115 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 PRSS47A8MTI9 375 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 S100A6P06703 90 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 GYPEP15421 78 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 IFI27P40305 119 aaPredicted RBP7.49□□□□□ -1.21
DDB1-221ENST00000543162 RPL32P62910 135 aaKnown RBP7.49□□□□□ -1.21
DDB1-221ENST00000543162 GAGE1Q13065 139 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 GAGE4Q13068 117 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 GAGE5Q13069 117 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 GAGE13Q4V321 117 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 FA2HQ7L5A8 372 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 TMEM70Q9BUB7 260 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 STAB2Q8WWQ8 2551 aa7.49□□□□□ -1.21
DDB1-221ENST00000543162 VCYO14598 125 aa7.48□□□□□ -1.21
DDB1-221ENST00000543162 POLR2KP53803 58 aaKnown RBP7.48□□□□□ -1.21
DDB1-221ENST00000543162 RNASEKQ6P5S7 137 aaKnown RBP7.48□□□□□ -1.21
DDB1-221ENST00000543162 NEGR1Q7Z3B1 354 aa7.48□□□□□ -1.21
DDB1-221ENST00000543162 NIT1Q86X76 327 aa7.48□□□□□ -1.21
DDB1-221ENST00000543162 Q8N8P6 123 aa7.48□□□□□ -1.21
DDB1-221ENST00000543162 VSIG2Q96IQ7 327 aa7.48□□□□□ -1.21
DDB1-221ENST00000543162 COL7A1Q02388 2944 aa7.47□□□□□ -1.21
DDB1-221ENST00000543162 IGLV2-18A0A075B6J9 118 aa7.47□□□□□ -1.21
DDB1-221ENST00000543162 TRBV27A0A0K0K1C4 114 aa7.47□□□□□ -1.21
DDB1-221ENST00000543162 SERF1AO75920 110 aa7.47□□□□□ -1.21
DDB1-221ENST00000543162 LINC00614P0C842 121 aa7.47□□□□□ -1.21
DDB1-221ENST00000543162 UBE2D3P61077 147 aa7.47□□□□□ -1.21
DDB1-221ENST00000543162 UBE2D2P62837 147 aa7.47□□□□□ -1.21
DDB1-221ENST00000543162 COA6Q5JTJ3 125 aaKnown RBP7.47□□□□□ -1.21
DDB1-221ENST00000543162 PHLDA1Q8WV24 401 aaPredicted RBP7.47□□□□□ -1.21
DDB1-221ENST00000543162 KIR2DL4Q99706 377 aa7.47□□□□□ -1.21
DDB1-221ENST00000543162 FBN3Q75N90 2809 aa7.46□□□□□ -1.21
DDB1-221ENST00000543162 H3BNG1 76 aa7.46□□□□□ -1.22
DDB1-221ENST00000543162 I3L3M4 83 aa7.46□□□□□ -1.22
DDB1-221ENST00000543162 FCER1GP30273 86 aa7.46□□□□□ -1.22
DDB1-221ENST00000543162 DAZ4Q86SG3 579 aaKnown RBP7.46□□□□□ -1.22
DDB1-221ENST00000543162 CHCHD1Q96BP2 118 aaKnown RBP7.46□□□□□ -1.22
DDB1-221ENST00000543162 URB1-AS1Q96HZ7 61 aa7.46□□□□□ -1.22
DDB1-221ENST00000543162 DAZ3Q9NR90 486 aaKnown RBP7.46□□□□□ -1.22
DDB1-221ENST00000543162 AP5S1Q9NUS5 200 aa7.46□□□□□ -1.22
DDB1-221ENST00000543162 ICOSQ9Y6W8 199 aa7.46□□□□□ -1.22
DDB1-221ENST00000543162 IGHV3-38A0A0C4DH36 116 aa7.45□□□□□ -1.22
DDB1-221ENST00000543162 K7EMI3 77 aa7.45□□□□□ -1.22
DDB1-221ENST00000543162 TCAPO15273 167 aa7.45□□□□□ -1.22
DDB1-221ENST00000543162 HSBP1O75506 76 aa7.45□□□□□ -1.22
DDB1-221ENST00000543162 LINC00694P0DN24 101 aa7.45□□□□□ -1.22
DDB1-221ENST00000543162 LINC00310P59036 64 aa7.45□□□□□ -1.22
DDB1-221ENST00000543162 MRPL23Q16540 153 aaKnown RBP7.45□□□□□ -1.22
DDB1-221ENST00000543162 ATP6V0E2Q8NHE4 81 aa7.45□□□□□ -1.22
DDB1-221ENST00000543162 DEFB104AQ8WTQ1 72 aa7.45□□□□□ -1.22
DDB1-221ENST00000543162 LINC01546A6NGU7 62 aa7.44□□□□□ -1.22
DDB1-221ENST00000543162 NUPR1O60356 82 aa7.44□□□□□ -1.22
DDB1-221ENST00000543162 TSHBP01222 138 aa7.44□□□□□ -1.22
DDB1-221ENST00000543162 SNRPEP62304 92 aaKnown RBP7.44□□□□□ -1.22
DDB1-221ENST00000543162 COTL1Q14019 142 aa7.44□□□□□ -1.22
DDB1-221ENST00000543162 LAGE3Q14657 143 aa7.44□□□□□ -1.22
DDB1-221ENST00000543162 ORMDL2Q53FV1 153 aa7.44□□□□□ -1.22
DDB1-221ENST00000543162 SH2D6Q7Z4S9 175 aa7.44□□□□□ -1.22
DDB1-221ENST00000543162 HUWE1Q7Z6Z7 4374 aaKnown RBP7.44□□□□□ -1.22
DDB1-221ENST00000543162 DNAH9Q9NYC9 4486 aa7.43□□□□□ -1.22
DDB1-221ENST00000543162 A0A096LPF7 62 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms