RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 J3QQQ9 107 aa11.06□□□□□ -0.64
GCFC2-211ENST00000541687 LENEPQ9Y5L5 61 aa11.06□□□□□ -0.64
GCFC2-211ENST00000541687 ZNRF2Q8NHG8 242 aa11.05□□□□□ -0.64
GCFC2-211ENST00000541687 ZFAND3Q9H8U3 227 aa11.05□□□□□ -0.64
GCFC2-211ENST00000541687 SUMO4Q6EEV6 95 aa11.05□□□□□ -0.64
GCFC2-211ENST00000541687 ATP6V0BQ99437 205 aa11.04□□□□□ -0.64
GCFC2-211ENST00000541687 IGKV2D-26A0A0A0MRZ7 120 aa11.04□□□□□ -0.64
GCFC2-211ENST00000541687 B5MCH6 92 aa11.04□□□□□ -0.64
GCFC2-211ENST00000541687 FSTL3O95633 263 aa11.04□□□□□ -0.64
GCFC2-211ENST00000541687 RAI1Q7Z5J4 1906 aaPredicted RBP11.04□□□□□ -0.64
GCFC2-211ENST00000541687 I3L3M4 83 aa11.04□□□□□ -0.64
GCFC2-211ENST00000541687 Q96MF0 132 aa11.04□□□□□ -0.64
GCFC2-211ENST00000541687 SLURP1P55000 103 aa11.03□□□□□ -0.64
GCFC2-211ENST00000541687 C11orf71Q6IPW1 123 aa11.03□□□□□ -0.64
GCFC2-211ENST00000541687 C20orf173Q96LM9 149 aa11.03□□□□□ -0.64
GCFC2-211ENST00000541687 TRAV12-1A0A0B4J245 112 aa11.03□□□□□ -0.64
GCFC2-211ENST00000541687 GATA3P23771 443 aa11.03□□□□□ -0.64
GCFC2-211ENST00000541687 C11orf21Q9P2W6 132 aa11.03□□□□□ -0.64
GCFC2-211ENST00000541687 TNRC6BQ9UPQ9 1833 aaKnown RBP11.03□□□□□ -0.64
GCFC2-211ENST00000541687 HAMPP81172 84 aa11.03□□□□□ -0.64
GCFC2-211ENST00000541687 MRGPRG-AS1Q2M3A8 158 aa11.03□□□□□ -0.64
GCFC2-211ENST00000541687 FRYQ5TBA9 3013 aa11.03□□□□□ -0.64
GCFC2-211ENST00000541687 APRG1Q8IVJ8 170 aa11.03□□□□□ -0.64
GCFC2-211ENST00000541687 MDFICQ9P1T7 246 aa11.02□□□□□ -0.64
GCFC2-211ENST00000541687 IGHG2P01859 326 aa11.02□□□□□ -0.65
GCFC2-211ENST00000541687 Q8N1Y9 231 aa11.02□□□□□ -0.65
GCFC2-211ENST00000541687 CITED1Q99966 193 aa11.02□□□□□ -0.65
GCFC2-211ENST00000541687 A0A1W2PPR1 153 aa11.02□□□□□ -0.65
GCFC2-211ENST00000541687 WFDC2Q14508 124 aa11.02□□□□□ -0.65
GCFC2-211ENST00000541687 TMEM141Q96I45 108 aa11.02□□□□□ -0.65
GCFC2-211ENST00000541687 CARD19Q96LW7 228 aa11.02□□□□□ -0.65
GCFC2-211ENST00000541687 TINCRA0A1B0GVN0 87 aa11.01□□□□□ -0.65
GCFC2-211ENST00000541687 C10orf99Q6UWK7 81 aa11.01□□□□□ -0.65
GCFC2-211ENST00000541687 ZFP2Q6ZN57 461 aa11.01□□□□□ -0.65
GCFC2-211ENST00000541687 RNF185Q96GF1 192 aa11.01□□□□□ -0.65
GCFC2-211ENST00000541687 OPRPNQ99935 248 aaPredicted RBP11.01□□□□□ -0.65
GCFC2-211ENST00000541687 EBI3Q14213 229 aa11.01□□□□□ -0.65
GCFC2-211ENST00000541687 IGLL5B9A064 214 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 DNAJC30Q96LL9 226 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 LINC01619G3V211 115 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 H3BUA1 57 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 GAGE7O76087 117 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 GAGE12FP0CL80 117 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 GAGE12GP0CL81 117 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 GAGE12IP0CL82 117 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 C15orf53Q8NAA6 179 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 IGHV4OR15-8A0A075B7B6 117 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 A0A087WW49 117 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 A0A0J9YXV3 536 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 HIST2H2BDQ6DRA6 164 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 BAALCQ8WXS3 180 aa11□□□□□ -0.65
GCFC2-211ENST00000541687 SOCS3O14543 225 aa10.99□□□□□ -0.65
GCFC2-211ENST00000541687 IFITM1P13164 125 aa10.99□□□□□ -0.65
GCFC2-211ENST00000541687 GAGE6Q13070 117 aa10.99□□□□□ -0.65
GCFC2-211ENST00000541687 Q6ZS46 218 aa10.99□□□□□ -0.65
GCFC2-211ENST00000541687 ACANP16112 2415 aa10.99□□□□□ -0.65
GCFC2-211ENST00000541687 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
GCFC2-211ENST00000541687 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
GCFC2-211ENST00000541687 CRYBA4P53673 196 aa10.99□□□□□ -0.65
GCFC2-211ENST00000541687 Q8N6K4 173 aa10.99□□□□□ -0.65
GCFC2-211ENST00000541687 INAFM2P0DMQ5 153 aa10.99□□□□□ -0.65
GCFC2-211ENST00000541687 VPREB3Q9UKI3 123 aa10.99□□□□□ -0.65
GCFC2-211ENST00000541687 PRR9Q5T870 116 aa10.98□□□□□ -0.65
GCFC2-211ENST00000541687 C11orf86A6NJI1 115 aa10.98□□□□□ -0.65
GCFC2-211ENST00000541687 RHODO00212 210 aa10.98□□□□□ -0.65
GCFC2-211ENST00000541687 MRPS12O15235 138 aaKnown RBP10.98□□□□□ -0.65
GCFC2-211ENST00000541687 C1QTNF4Q9BXJ3 329 aa10.98□□□□□ -0.65
GCFC2-211ENST00000541687 PRRC2AP48634 2157 aaKnown RBP10.98□□□□□ -0.65
GCFC2-211ENST00000541687 A0A096LPF7 62 aa10.98□□□□□ -0.65
GCFC2-211ENST00000541687 SS18Q15532 418 aa10.98□□□□□ -0.65
GCFC2-211ENST00000541687 F8W735 103 aaPredicted RBP10.97□□□□□ -0.65
GCFC2-211ENST00000541687 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
GCFC2-211ENST00000541687 CFC1P0CG37 223 aa10.97□□□□□ -0.65
GCFC2-211ENST00000541687 C2orf91Q6ZV80 131 aa10.97□□□□□ -0.65
GCFC2-211ENST00000541687 ELANEP08246 267 aa10.97□□□□□ -0.65
GCFC2-211ENST00000541687 TAL2Q16559 108 aa10.97□□□□□ -0.65
GCFC2-211ENST00000541687 MAPKAPK5-AS1Q8N8E1 139 aa10.96□□□□□ -0.65
GCFC2-211ENST00000541687 A6NDX4 124 aa10.96□□□□□ -0.66
GCFC2-211ENST00000541687 CLPSL2Q6UWE3 100 aa10.96□□□□□ -0.66
GCFC2-211ENST00000541687 ZFAND2AQ8N6M9 145 aa10.96□□□□□ -0.66
GCFC2-211ENST00000541687 CITED2Q99967 270 aaPredicted RBP10.96□□□□□ -0.66
GCFC2-211ENST00000541687 SS18L2Q9UHA2 77 aa10.96□□□□□ -0.66
GCFC2-211ENST00000541687 FOXI2Q6ZQN5 318 aa10.95□□□□□ -0.66
GCFC2-211ENST00000541687 TOMM6Q96B49 74 aa10.95□□□□□ -0.66
GCFC2-211ENST00000541687 BOD1L1Q8NFC6 3051 aa10.94□□□□□ -0.66
GCFC2-211ENST00000541687 CLPSL1A2RUU4 121 aa10.94□□□□□ -0.66
GCFC2-211ENST00000541687 CEMP1Q6PRD7 247 aaPredicted RBP10.94□□□□□ -0.66
GCFC2-211ENST00000541687 U3KQK5 164 aa10.94□□□□□ -0.66
GCFC2-211ENST00000541687 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
GCFC2-211ENST00000541687 P0DMU3 169 aa10.93□□□□□ -0.66
GCFC2-211ENST00000541687 FAM231AP0DMU4 169 aa10.93□□□□□ -0.66
GCFC2-211ENST00000541687 FAM231CP0DMU5 169 aa10.93□□□□□ -0.66
GCFC2-211ENST00000541687 U3KQE9 123 aa10.93□□□□□ -0.66
GCFC2-211ENST00000541687 HIGD1BQ9P298 99 aa10.93□□□□□ -0.66
GCFC2-211ENST00000541687 F8P00451 2351 aa10.93□□□□□ -0.66
GCFC2-211ENST00000541687 A4D1N5 150 aa10.93□□□□□ -0.66
GCFC2-211ENST00000541687 UBL5Q9BZL1 73 aa10.93□□□□□ -0.66
GCFC2-211ENST00000541687 MAP1AP78559 2803 aaPredicted RBP10.93□□□□□ -0.66
GCFC2-211ENST00000541687 F5H768 121 aa10.93□□□□□ -0.66
GCFC2-211ENST00000541687 SRSF2Q01130 221 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms