RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 WDR73Q6P4I2 378 aa6.25□□□□□ -1.41
SNHG1-215ENST00000540904 C10orf126Q8N4M7 172 aa6.25□□□□□ -1.41
SNHG1-215ENST00000540904 PGLYRP4Q96LB8 373 aa6.25□□□□□ -1.41
SNHG1-215ENST00000540904 CNFNQ9BYD5 112 aa6.25□□□□□ -1.41
SNHG1-215ENST00000540904 ADIRFQ15847 76 aa6.24□□□□□ -1.41
SNHG1-215ENST00000540904 CT83Q5H943 113 aa6.24□□□□□ -1.41
SNHG1-215ENST00000540904 SUMO4Q6EEV6 95 aa6.24□□□□□ -1.41
SNHG1-215ENST00000540904 NFE4Q86UQ8 179 aa6.24□□□□□ -1.41
SNHG1-215ENST00000540904 C15orf54Q8N8G6 183 aa6.24□□□□□ -1.41
SNHG1-215ENST00000540904 OR10G8Q8NGN5 311 aa6.24□□□□□ -1.41
SNHG1-215ENST00000540904 ISOC2Q96AB3 205 aa6.24□□□□□ -1.41
SNHG1-215ENST00000540904 DPH3P1Q9H4G8 78 aa6.24□□□□□ -1.41
SNHG1-215ENST00000540904 SMDT1Q9H4I9 107 aa6.24□□□□□ -1.41
SNHG1-215ENST00000540904 OSTCQ9NRP0 149 aa6.24□□□□□ -1.41
SNHG1-215ENST00000540904 EPPK1P58107 5090 aaKnown RBP6.24□□□□□ -1.41
SNHG1-215ENST00000540904 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-215ENST00000540904 H7C1H1 209 aa6.23□□□□□ -1.41
SNHG1-215ENST00000540904 M0QY20 66 aa6.23□□□□□ -1.41
SNHG1-215ENST00000540904 RPL23P62829 140 aaKnown RBP6.23□□□□□ -1.41
SNHG1-215ENST00000540904 Q6ZRN7 208 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-215ENST00000540904 SMIM15Q7Z3B0 74 aa6.23□□□□□ -1.41
SNHG1-215ENST00000540904 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-215ENST00000540904 TSKUQ8WUA8 353 aa6.23□□□□□ -1.41
SNHG1-215ENST00000540904 BORCS7Q96B45 105 aa6.23□□□□□ -1.41
SNHG1-215ENST00000540904 NAT8Q9UHE5 227 aa6.23□□□□□ -1.41
SNHG1-215ENST00000540904 TRBV6-8A0A0A6YYG3 113 aa6.22□□□□□ -1.41
SNHG1-215ENST00000540904 HIGD1CA8MV81 97 aa6.22□□□□□ -1.41
SNHG1-215ENST00000540904 IBA57-AS1B1ANH7 110 aa6.22□□□□□ -1.41
SNHG1-215ENST00000540904 FOXA3P55318 350 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-215ENST00000540904 RASL11AQ6T310 242 aa6.22□□□□□ -1.41
SNHG1-215ENST00000540904 DAZ4Q86SG3 579 aaKnown RBP6.22□□□□□ -1.41
SNHG1-215ENST00000540904 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
SNHG1-215ENST00000540904 GFRA4Q9GZZ7 299 aa6.22□□□□□ -1.41
SNHG1-215ENST00000540904 Q9HAA7 133 aa6.22□□□□□ -1.41
SNHG1-215ENST00000540904 DAZ3Q9NR90 486 aaKnown RBP6.22□□□□□ -1.41
SNHG1-215ENST00000540904 URGCP-MRPS24S4R325 110 aa6.22□□□□□ -1.41
SNHG1-215ENST00000540904 V9GYV3 84 aa6.22□□□□□ -1.41
SNHG1-215ENST00000540904 FRAS1Q86XX4 4008 aa6.22□□□□□ -1.41
SNHG1-215ENST00000540904 DNAH6Q9C0G6 4158 aa6.21□□□□□ -1.41
SNHG1-215ENST00000540904 A0A087WX48 190 aa6.21□□□□□ -1.42
SNHG1-215ENST00000540904 TRAV26-2A0A0B4J265 109 aa6.21□□□□□ -1.42
SNHG1-215ENST00000540904 NIT1Q86X76 327 aa6.21□□□□□ -1.42
SNHG1-215ENST00000540904 DNAJC30Q96LL9 226 aa6.21□□□□□ -1.42
SNHG1-215ENST00000540904 A0A1B0GUT8 65 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 FAM231BA6NCW3 169 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 TMEM262E9PQX1 116 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 PSCAO43653 123 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 IFITM2Q01629 132 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 LAGE3Q14657 143 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 CLLU1Q5K131 121 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 KCNIP4Q6PIL6 250 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 NTM-AS1Q6ZSK4 140 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 SPATA12Q7Z6I5 190 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 GATD1Q8NB37 220 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 CHCHD5Q9BSY4 110 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 NIT2Q9NQR4 276 aa6.2□□□□□ -1.42
SNHG1-215ENST00000540904 KRTAP9-6A0A140TA67 174 aa6.19□□□□□ -1.42
SNHG1-215ENST00000540904 C16orf90A8MZG2 172 aa6.19□□□□□ -1.42
SNHG1-215ENST00000540904 EREGO14944 169 aa6.19□□□□□ -1.42
SNHG1-215ENST00000540904 TMEM97Q5BJF2 176 aa6.19□□□□□ -1.42
SNHG1-215ENST00000540904 NUP35Q8NFH5 326 aa6.19□□□□□ -1.42
SNHG1-215ENST00000540904 DEFB104AQ8WTQ1 72 aa6.19□□□□□ -1.42
SNHG1-215ENST00000540904 NAT8BQ9UHF3 227 aa6.19□□□□□ -1.42
SNHG1-215ENST00000540904 KLK12Q9UKR0 248 aa6.19□□□□□ -1.42
SNHG1-215ENST00000540904 TRBV25-1A0A075B6N4 114 aa6.18□□□□□ -1.42
SNHG1-215ENST00000540904 TRAV8-3A0A0A6YYJ7 113 aa6.18□□□□□ -1.42
SNHG1-215ENST00000540904 SMIM27A0A1W2PRY6 76 aa6.18□□□□□ -1.42
SNHG1-215ENST00000540904 KRTAP10-2P60368 255 aa6.18□□□□□ -1.42
SNHG1-215ENST00000540904 RIGQ13278 110 aa6.18□□□□□ -1.42
SNHG1-215ENST00000540904 FRZBQ92765 325 aa6.18□□□□□ -1.42
SNHG1-215ENST00000540904 RPL39LQ96EH5 51 aaKnown RBP6.18□□□□□ -1.42
SNHG1-215ENST00000540904 CHCHD7Q9BUK0 85 aa6.18□□□□□ -1.42
SNHG1-215ENST00000540904 A0A087WTM6 91 aa6.17□□□□□ -1.42
SNHG1-215ENST00000540904 IGHV1-24A0A0C4DH33 117 aa6.17□□□□□ -1.42
SNHG1-215ENST00000540904 FUSP35637 526 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNHG1-215ENST00000540904 GAGE6Q13070 117 aa6.17□□□□□ -1.42
SNHG1-215ENST00000540904 COTL1Q14019 142 aa6.17□□□□□ -1.42
SNHG1-215ENST00000540904 ELOBQ15370 118 aa6.17□□□□□ -1.42
SNHG1-215ENST00000540904 IQCJQ1A5X6 159 aa6.17□□□□□ -1.42
SNHG1-215ENST00000540904 MPV17L2Q567V2 206 aa6.17□□□□□ -1.42
SNHG1-215ENST00000540904 AMN1Q8IY45 258 aa6.17□□□□□ -1.42
SNHG1-215ENST00000540904 UBE2WQ96B02 151 aa6.17□□□□□ -1.42
SNHG1-215ENST00000540904 TMEM191AQ9H0A3 160 aa6.17□□□□□ -1.42
SNHG1-215ENST00000540904 DNAH10Q8IVF4 4471 aa6.17□□□□□ -1.42
SNHG1-215ENST00000540904 GAS8-AS1O95177 125 aa6.16□□□□□ -1.42
SNHG1-215ENST00000540904 ANGP03950 147 aaKnown RBP6.16□□□□□ -1.42
SNHG1-215ENST00000540904 RAB4AP20338 218 aa6.16□□□□□ -1.42
SNHG1-215ENST00000540904 AMTP48728 403 aa6.16□□□□□ -1.42
SNHG1-215ENST00000540904 PKIAP61925 76 aa6.16□□□□□ -1.42
SNHG1-215ENST00000540904 ATRAIDQ6UW56 229 aa6.16□□□□□ -1.42
SNHG1-215ENST00000540904 Q8N976 141 aa6.16□□□□□ -1.42
SNHG1-215ENST00000540904 RNF185Q96GF1 192 aa6.16□□□□□ -1.42
SNHG1-215ENST00000540904 TMEM243Q9BU79 118 aa6.16□□□□□ -1.42
SNHG1-215ENST00000540904 TM2D2Q9BX73 214 aa6.16□□□□□ -1.42
SNHG1-215ENST00000540904 DNAH2Q9P225 4427 aa6.15□□□□□ -1.42
SNHG1-215ENST00000540904 IGKV2D-24A0A075B6R9 120 aa6.15□□□□□ -1.42
SNHG1-215ENST00000540904 LRCOL1A6NCL2 159 aa6.15□□□□□ -1.42
SNHG1-215ENST00000540904 CAMPP49913 170 aa6.15□□□□□ -1.42
SNHG1-215ENST00000540904 RBX1P62877 108 aa6.15□□□□□ -1.42
SNHG1-215ENST00000540904 PNRC1Q12796 327 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms