RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CYSLTR1Q9Y271 337 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 TRAV12-2A0A075B6T6 113 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 NDUFA3O95167 84 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 IGHV4-39P01824 125 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 IGHV4-38-2P0DP08 117 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 KRTAP21-3Q3LHN1 58 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 PAPPA-AS1Q5QFB9 102 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 C14orf178Q8N769 122 aaPredicted RBP4.03□□□□□ -1.76
PROM1-220ENST00000540805 Q8N8P6 123 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 DAZ1Q9NQZ3 744 aaKnown RBP4.03□□□□□ -1.76
PROM1-220ENST00000540805 MRPL35Q9NZE8 188 aaKnown RBP4.03□□□□□ -1.76
PROM1-220ENST00000540805 UBR5O95071 2799 aaPredicted RBP4.03□□□□□ -1.76
PROM1-220ENST00000540805 K7EIM0 57 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 GATA1P15976 413 aaPredicted RBP4.03□□□□□ -1.76
PROM1-220ENST00000540805 ERCC8Q13216 396 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 COX8CQ7Z4L0 72 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 ATP6V0E2Q8NHE4 81 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 ESM1Q9NQ30 184 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 MSRB1Q9NZV6 116 aa4.03□□□□□ -1.76
PROM1-220ENST00000540805 KLK5Q9Y337 293 aaPredicted RBP4.03□□□□□ -1.76
PROM1-220ENST00000540805 OVOL1O14753 267 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 TRBV7-3A0A075B6L6 115 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 TRAV13-1A0A0B4J241 112 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 COX6CP09669 75 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 ZNF80P51504 273 aaPredicted RBP4.02□□□□□ -1.77
PROM1-220ENST00000540805 CRIP2P52943 208 aaPredicted RBP4.02□□□□□ -1.77
PROM1-220ENST00000540805 KLK9Q9UKQ9 250 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 A4D1N5 150 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 GAGE7O76087 117 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 GAGE12FP0CL80 117 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 GAGE12GP0CL81 117 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 GAGE12IP0CL82 117 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 PLNP26678 52 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 MORN3Q6PF18 240 aaPredicted RBP4.02□□□□□ -1.77
PROM1-220ENST00000540805 USMG5Q96IX5 58 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 CNFNQ9BYD5 112 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 LINC01619G3V211 115 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 LAGE3Q14657 143 aa4.02□□□□□ -1.77
PROM1-220ENST00000540805 DLX4Q92988 240 aaPredicted RBP4.02□□□□□ -1.77
PROM1-220ENST00000540805 ADARB2-AS1A8MUL3 147 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 SPRY2O43597 315 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 DTX2Q86UW9 622 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 FLNCQ14315 2725 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 IGLV2-18A0A075B6J9 118 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 TRBV7-1A0A0A6YYK4 115 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 MYMXA0A1B0GTQ4 84 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 F6UB75 175 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 DNAL4O96015 105 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 CD28P10747 220 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 NDUFV3P56181 108 aaKnown RBP4.01□□□□□ -1.77
PROM1-220ENST00000540805 NPC2P61916 151 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 RPL36AP83881 106 aaKnown RBP4.01□□□□□ -1.77
PROM1-220ENST00000540805 CFAP126Q5VTH2 177 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 ZFAND6Q6FIF0 208 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 WFDC11Q8NEX6 87 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 RPL36ALQ969Q0 106 aaKnown RBP4.01□□□□□ -1.77
PROM1-220ENST00000540805 ZNF625Q96I27 306 aaPredicted RBP4.01□□□□□ -1.77
PROM1-220ENST00000540805 GAGE12JA6NER3 117 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 LINC01549A6NIU2 74 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 C19orf84I3L1E1 186 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 DAD1P61803 113 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 GAGE4Q13068 117 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 PRADC1Q9BSG0 188 aa4.01□□□□□ -1.77
PROM1-220ENST00000540805 F8VRH5 84 aa4□□□□□ -1.77
PROM1-220ENST00000540805 LYRM7Q5U5X0 104 aa4□□□□□ -1.77
PROM1-220ENST00000540805 HIST2H2BDQ6DRA6 164 aa4□□□□□ -1.77
PROM1-220ENST00000540805 TRGV11A0A075B6L2 103 aa4□□□□□ -1.77
PROM1-220ENST00000540805 A0A0J9YY99 117 aa4□□□□□ -1.77
PROM1-220ENST00000540805 IGLV1-47P01700 117 aa4□□□□□ -1.77
PROM1-220ENST00000540805 C9orf139Q6ZV77 190 aa4□□□□□ -1.77
PROM1-220ENST00000540805 RNF5Q99942 180 aa4□□□□□ -1.77
PROM1-220ENST00000540805 TRAV12-1A0A0B4J245 112 aa4□□□□□ -1.77
PROM1-220ENST00000540805 IGHV3-38A0A0C4DH36 116 aa4□□□□□ -1.77
PROM1-220ENST00000540805 DEFB4AO15263 64 aa4□□□□□ -1.77
PROM1-220ENST00000540805 INSP01308 110 aa4□□□□□ -1.77
PROM1-220ENST00000540805 LINC00694P0DN24 101 aa4□□□□□ -1.77
PROM1-220ENST00000540805 HLA-DMBP28068 263 aa4□□□□□ -1.77
PROM1-220ENST00000540805 LINC00158P58513 81 aa4□□□□□ -1.77
PROM1-220ENST00000540805 TRPT1Q86TN4 253 aaKnown RBP4□□□□□ -1.77
PROM1-220ENST00000540805 PPDPFLQ8WWR9 84 aa4□□□□□ -1.77
PROM1-220ENST00000540805 KAAG1Q9UBP8 84 aa4□□□□□ -1.77
PROM1-220ENST00000540805 LGALS1P09382 135 aaKnown RBP3.99□□□□□ -1.77
PROM1-220ENST00000540805 TTC32Q5I0X7 151 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 ANKRD29Q8N6D5 301 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 SPXQ9BT56 116 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 CCL24O00175 119 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 ZNF575Q86XF7 245 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 APRG1Q8IVJ8 170 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 CFHR4Q92496 578 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 Q9HAA7 133 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 TRAV26-2A0A0B4J265 109 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 SLURP1P55000 103 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 C6orf226Q5I0X4 101 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 CLPSL2Q6UWE3 100 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 DYNAPQ8N1N2 210 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 NRACQ8N912 160 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 OR11H6Q8NGC7 330 aa3.99□□□□□ -1.77
PROM1-220ENST00000540805 ZNF815PA8K554 130 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 INAFM1C9JVW0 142 aa3.98□□□□□ -1.77
PROM1-220ENST00000540805 TCL1BO95988 128 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms