RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TNFRSF18Q9Y5U5 241 aa6.97□□□□□ -1.29
CDCA3-208ENST00000540683 P01737 135 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 CRPP02741 224 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 TRGC1P0CF51 173 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 UBE2D3P61077 147 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 UBE2D2P62837 147 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 Q6ZSN1 163 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 NIT1Q86X76 327 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 FER1L6-AS1Q8NA97 138 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 DNAJC30Q96LL9 226 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 JPT2Q9H910 190 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 VAX2Q9UIW0 290 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 RYR1P21817 5038 aa6.96□□□□□ -1.3
CDCA3-208ENST00000540683 DYNC1H1Q14204 4646 aaKnown RBP6.95□□□□□ -1.3
CDCA3-208ENST00000540683 TRBV6-8A0A0A6YYG3 113 aa6.95□□□□□ -1.3
CDCA3-208ENST00000540683 LRCOL1A6NCL2 159 aa6.95□□□□□ -1.3
CDCA3-208ENST00000540683 TMEM262E9PQX1 116 aa6.95□□□□□ -1.3
CDCA3-208ENST00000540683 BLOC1S1P78537 153 aa6.95□□□□□ -1.3
CDCA3-208ENST00000540683 CENPWQ5EE01 88 aa6.95□□□□□ -1.3
CDCA3-208ENST00000540683 SMIM15Q7Z3B0 74 aa6.95□□□□□ -1.3
CDCA3-208ENST00000540683 OR2D3Q8NGH3 330 aa6.95□□□□□ -1.3
CDCA3-208ENST00000540683 OR10AG1Q8NH19 301 aa6.95□□□□□ -1.3
CDCA3-208ENST00000540683 MED9Q9NWA0 146 aa6.95□□□□□ -1.3
CDCA3-208ENST00000540683 BCL2P10415 239 aa6.94□□□□□ -1.3
CDCA3-208ENST00000540683 WDR73Q6P4I2 378 aa6.94□□□□□ -1.3
CDCA3-208ENST00000540683 AKAP14Q86UN6 197 aa6.94□□□□□ -1.3
CDCA3-208ENST00000540683 C1orf43Q9BWL3 253 aa6.94□□□□□ -1.3
CDCA3-208ENST00000540683 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
CDCA3-208ENST00000540683 TRBV25-1A0A075B6N4 114 aa6.93□□□□□ -1.3
CDCA3-208ENST00000540683 IGKV2D-24A0A075B6R9 120 aa6.93□□□□□ -1.3
CDCA3-208ENST00000540683 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
CDCA3-208ENST00000540683 MIAQ16674 131 aa6.93□□□□□ -1.3
CDCA3-208ENST00000540683 CHCHD5Q9BSY4 110 aa6.93□□□□□ -1.3
CDCA3-208ENST00000540683 TPPP3Q9BW30 176 aa6.93□□□□□ -1.3
CDCA3-208ENST00000540683 KLK12Q9UKR0 248 aa6.93□□□□□ -1.3
CDCA3-208ENST00000540683 RPL19P84098 196 aaKnown RBP6.92□□□□□ -1.3
CDCA3-208ENST00000540683 TEX261Q6UWH6 196 aa6.92□□□□□ -1.3
CDCA3-208ENST00000540683 NEXN-AS1Q8NBZ9 246 aa6.92□□□□□ -1.3
CDCA3-208ENST00000540683 IGHV1-24A0A0C4DH33 117 aa6.91□□□□□ -1.3
CDCA3-208ENST00000540683 C19orf71A6NCJ1 209 aa6.91□□□□□ -1.3
CDCA3-208ENST00000540683 TMEM250H0YL14 139 aa6.91□□□□□ -1.3
CDCA3-208ENST00000540683 NDUFS6O75380 124 aaKnown RBP6.91□□□□□ -1.3
CDCA3-208ENST00000540683 ANGP03950 147 aaKnown RBP6.91□□□□□ -1.3
CDCA3-208ENST00000540683 ATRAIDQ6UW56 229 aa6.91□□□□□ -1.3
CDCA3-208ENST00000540683 UBE2WQ96B02 151 aa6.91□□□□□ -1.3
CDCA3-208ENST00000540683 FAM210AQ96ND0 272 aa6.91□□□□□ -1.3
CDCA3-208ENST00000540683 DERL1Q9BUN8 251 aa6.91□□□□□ -1.3
CDCA3-208ENST00000540683 DPH3P1Q9H4G8 78 aa6.91□□□□□ -1.3
CDCA3-208ENST00000540683 PLA2G1BP04054 148 aaKnown RBP6.9□□□□□ -1.3
CDCA3-208ENST00000540683 MGPP08493 103 aa6.9□□□□□ -1.3
CDCA3-208ENST00000540683 IGLC6P0CF74 106 aa6.9□□□□□ -1.3
CDCA3-208ENST00000540683 KRTAP10-1P60331 282 aa6.9□□□□□ -1.3
CDCA3-208ENST00000540683 RASL11AQ6T310 242 aa6.9□□□□□ -1.3
CDCA3-208ENST00000540683 C9orf62Q8N4C0 152 aa6.9□□□□□ -1.3
CDCA3-208ENST00000540683 BORCS7Q96B45 105 aa6.9□□□□□ -1.3
CDCA3-208ENST00000540683 LRP1BQ9NZR2 4599 aa6.89□□□□□ -1.31
CDCA3-208ENST00000540683 A8MWL6 223 aa6.89□□□□□ -1.31
CDCA3-208ENST00000540683 UBE2L6O14933 153 aa6.89□□□□□ -1.31
CDCA3-208ENST00000540683 XGP55808 180 aa6.89□□□□□ -1.31
CDCA3-208ENST00000540683 IQCJQ1A5X6 159 aa6.89□□□□□ -1.31
CDCA3-208ENST00000540683 Q5VSD8 79 aa6.89□□□□□ -1.31
CDCA3-208ENST00000540683 Q6ZNX1 250 aa6.89□□□□□ -1.31
CDCA3-208ENST00000540683 C15orf54Q8N8G6 183 aa6.89□□□□□ -1.31
CDCA3-208ENST00000540683 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
CDCA3-208ENST00000540683 RPP21Q9H633 154 aaKnown RBP6.89□□□□□ -1.31
CDCA3-208ENST00000540683 NIT2Q9NQR4 276 aa6.89□□□□□ -1.31
CDCA3-208ENST00000540683 HSPG2P98160 4391 aa6.88□□□□□ -1.31
CDCA3-208ENST00000540683 TRAV8-4A0A0B4J246 113 aa6.88□□□□□ -1.31
CDCA3-208ENST00000540683 RAB19A4D1S5 217 aa6.88□□□□□ -1.31
CDCA3-208ENST00000540683 M0QY20 66 aa6.88□□□□□ -1.31
CDCA3-208ENST00000540683 INAFM2P0DMQ5 153 aa6.88□□□□□ -1.31
CDCA3-208ENST00000540683 GZMBP10144 247 aa6.88□□□□□ -1.31
CDCA3-208ENST00000540683 CTRLP40313 264 aa6.88□□□□□ -1.31
CDCA3-208ENST00000540683 TWIST1Q15672 202 aa6.88□□□□□ -1.31
CDCA3-208ENST00000540683 Q9UF83 564 aa6.88□□□□□ -1.31
CDCA3-208ENST00000540683 KIF25-AS1Q9Y6Z4 181 aa6.88□□□□□ -1.31
CDCA3-208ENST00000540683 MUC21A0A0G2JKD1 596 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 MUC21A0A140T8X8 626 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 A0A1B0GUV1 79 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 IGLV2-8P01709 118 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 NTF3P20783 257 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 SSTP61278 116 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 COTL1Q14019 142 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 DGAT2L7PQ6IED9 249 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 LYZL1Q6UWQ5 148 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 NUDT10Q8NFP7 164 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 BAALCQ8WXS3 180 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 NUDT11Q96G61 164 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 TMEM243Q9BU79 118 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 CNFNQ9BYD5 112 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 DNAH5Q8TE73 4624 aa6.87□□□□□ -1.31
CDCA3-208ENST00000540683 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-208ENST00000540683 NCR2O95944 276 aa6.86□□□□□ -1.31
CDCA3-208ENST00000540683 MPV17L2Q567V2 206 aa6.86□□□□□ -1.31
CDCA3-208ENST00000540683 SUMO4Q6EEV6 95 aa6.86□□□□□ -1.31
CDCA3-208ENST00000540683 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
CDCA3-208ENST00000540683 EIF5A2Q9GZV4 153 aaKnown RBP6.86□□□□□ -1.31
CDCA3-208ENST00000540683 PRR34Q9NV39 138 aa6.86□□□□□ -1.31
CDCA3-208ENST00000540683 ABCA13Q86UQ4 5058 aa6.86□□□□□ -1.31
CDCA3-208ENST00000540683 TRBV20OR9-2A0A075B6H5 130 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms