RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 IGIPA6NJ69 53 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 AMTNQ6UX39 209 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 KIR2DL4Q99706 377 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 M0QY20 66 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 VCYO14598 125 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 PPP1R17O96001 155 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 P0DMU3 169 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 FAM231AP0DMU4 169 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 FAM231CP0DMU5 169 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 FABP2P12104 132 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 PCP4P48539 62 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 ODF3Q96PU9 254 aa8.49□□□□□ -1.05
C11orf54-214ENST00000540113 WFDC11Q8NEX6 87 aa8.48□□□□□ -1.05
C11orf54-214ENST00000540113 CHD6Q8TD26 2715 aa8.48□□□□□ -1.05
C11orf54-214ENST00000540113 NF1P21359 2839 aa8.48□□□□□ -1.05
C11orf54-214ENST00000540113 ZNF815PA8K554 130 aa8.48□□□□□ -1.05
C11orf54-214ENST00000540113 C12orf74Q32Q52 190 aa8.48□□□□□ -1.05
C11orf54-214ENST00000540113 C11orf44Q8N8P7 122 aa8.48□□□□□ -1.05
C11orf54-214ENST00000540113 VPS25Q9BRG1 176 aa8.48□□□□□ -1.05
C11orf54-214ENST00000540113 AKAP9Q99996 3911 aa8.47□□□□□ -1.05
C11orf54-214ENST00000540113 TRBV7-3A0A075B6L6 115 aa8.47□□□□□ -1.05
C11orf54-214ENST00000540113 RBMY1BA6NDE4 496 aaKnown RBP8.47□□□□□ -1.05
C11orf54-214ENST00000540113 RBMY1EA6NEQ0 496 aaKnown RBP8.47□□□□□ -1.05
C11orf54-214ENST00000540113 E9PLD3 99 aa8.47□□□□□ -1.05
C11orf54-214ENST00000540113 RBMY1DP0C7P1 496 aaKnown RBP8.47□□□□□ -1.05
C11orf54-214ENST00000540113 SCGB2A2Q13296 93 aa8.47□□□□□ -1.05
C11orf54-214ENST00000540113 SYT8Q8NBV8 401 aa8.47□□□□□ -1.05
C11orf54-214ENST00000540113 Q9UF83 564 aa8.47□□□□□ -1.05
C11orf54-214ENST00000540113 IGLL5B9A064 214 aa8.46□□□□□ -1.05
C11orf54-214ENST00000540113 FOXI2Q6ZQN5 318 aa8.46□□□□□ -1.05
C11orf54-214ENST00000540113 TMEM61Q8N0U2 210 aa8.46□□□□□ -1.05
C11orf54-214ENST00000540113 ZNRF2Q8NHG8 242 aa8.46□□□□□ -1.05
C11orf54-214ENST00000540113 TRBV27A0A0K0K1C4 114 aa8.46□□□□□ -1.06
C11orf54-214ENST00000540113 PMVKQ15126 192 aa8.46□□□□□ -1.06
C11orf54-214ENST00000540113 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.06
C11orf54-214ENST00000540113 SCGB1D4Q6XE38 83 aa8.46□□□□□ -1.06
C11orf54-214ENST00000540113 MTURNQ8N3F0 131 aa8.46□□□□□ -1.06
C11orf54-214ENST00000540113 WNK1Q9H4A3 2382 aa8.46□□□□□ -1.06
C11orf54-214ENST00000540113 TSPEAR-AS2P59090 65 aa8.45□□□□□ -1.06
C11orf54-214ENST00000540113 DLX4Q92988 240 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-214ENST00000540113 IGHV3-64A0A075B6Q5 118 aa8.45□□□□□ -1.06
C11orf54-214ENST00000540113 SFTA2Q6UW10 78 aa8.45□□□□□ -1.06
C11orf54-214ENST00000540113 RPL32P62910 135 aaKnown RBP8.44□□□□□ -1.06
C11orf54-214ENST00000540113 A0A1W2PRX2 142 aa8.44□□□□□ -1.06
C11orf54-214ENST00000540113 LINC01619G3V211 115 aa8.44□□□□□ -1.06
C11orf54-214ENST00000540113 RIPPLY3P57055 190 aa8.44□□□□□ -1.06
C11orf54-214ENST00000540113 ZNF479Q96JC4 524 aa8.44□□□□□ -1.06
C11orf54-214ENST00000540113 TRBV6-5A0A0K0K1A5 114 aa8.43□□□□□ -1.06
C11orf54-214ENST00000540113 H3BMM0 161 aa8.43□□□□□ -1.06
C11orf54-214ENST00000540113 TAL2Q16559 108 aa8.43□□□□□ -1.06
C11orf54-214ENST00000540113 CEMP1Q6PRD7 247 aaPredicted RBP8.43□□□□□ -1.06
C11orf54-214ENST00000540113 Q6ZSV7 163 aa8.43□□□□□ -1.06
C11orf54-214ENST00000540113 TRPT1Q86TN4 253 aaKnown RBP8.43□□□□□ -1.06
C11orf54-214ENST00000540113 C4orf3Q8WVX3 66 aa8.43□□□□□ -1.06
C11orf54-214ENST00000540113 FLNAP21333 2647 aaKnown RBP8.43□□□□□ -1.06
C11orf54-214ENST00000540113 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.06
C11orf54-214ENST00000540113 SRSF9Q13242 221 aaKnown RBP eCLIP8.43□□□□□ -1.06
C11orf54-214ENST00000540113 RNASE13Q5GAN3 156 aaKnown RBP8.43□□□□□ -1.06
C11orf54-214ENST00000540113 Q6ZSN1 163 aa8.43□□□□□ -1.06
C11orf54-214ENST00000540113 SETD2Q9BYW2 2564 aaPredicted RBP8.43□□□□□ -1.06
C11orf54-214ENST00000540113 CCDC168Q8NDH2 2452 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 TRGV11A0A075B6L2 103 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 DNAJC9-AS1A6NH13 148 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 H3BMG7 143 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 TEX29Q8N6K0 151 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 TIMM17AQ99595 171 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 PDZD2O15018 2839 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 K7ERU9 68 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 TMEM86BQ8N661 226 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 NACAE9PAV3 2078 aa8.42□□□□□ -1.06
C11orf54-214ENST00000540113 A8MTW9 85 aa8.41□□□□□ -1.06
C11orf54-214ENST00000540113 RPL24P83731 157 aaKnown RBP8.41□□□□□ -1.06
C11orf54-214ENST00000540113 KRTAP1-1Q07627 177 aa8.41□□□□□ -1.06
C11orf54-214ENST00000540113 DYNLRB2Q8TF09 96 aa8.41□□□□□ -1.06
C11orf54-214ENST00000540113 SPAG8Q99932 426 aaPredicted RBP8.41□□□□□ -1.06
C11orf54-214ENST00000540113 MAP6D1Q9H9H5 199 aa8.41□□□□□ -1.06
C11orf54-214ENST00000540113 ESM1Q9NQ30 184 aa8.41□□□□□ -1.06
C11orf54-214ENST00000540113 I3L3M4 83 aa8.41□□□□□ -1.06
C11orf54-214ENST00000540113 C20orf203Q8NBC4 194 aa8.41□□□□□ -1.06
C11orf54-214ENST00000540113 A0A0J9YXV3 536 aa8.4□□□□□ -1.06
C11orf54-214ENST00000540113 APOMO95445 188 aa8.4□□□□□ -1.06
C11orf54-214ENST00000540113 WFDC2Q14508 124 aa8.4□□□□□ -1.06
C11orf54-214ENST00000540113 NSUN5P1Q3KNT7 163 aa8.4□□□□□ -1.06
C11orf54-214ENST00000540113 MRPL16Q9NX20 251 aaKnown RBP8.4□□□□□ -1.06
C11orf54-214ENST00000540113 PGPEP1Q9NXJ5 209 aa8.4□□□□□ -1.06
C11orf54-214ENST00000540113 IGHV3OR16-12A0A075B7B8 117 aa8.4□□□□□ -1.07
C11orf54-214ENST00000540113 IGHV3-38A0A0C4DH36 116 aa8.4□□□□□ -1.07
C11orf54-214ENST00000540113 A0A0J9YY99 117 aa8.4□□□□□ -1.07
C11orf54-214ENST00000540113 CD28P10747 220 aa8.4□□□□□ -1.07
C11orf54-214ENST00000540113 HERVK_113P61574 105 aa8.4□□□□□ -1.07
C11orf54-214ENST00000540113 RRN3P1Q2M238 152 aa8.4□□□□□ -1.07
C11orf54-214ENST00000540113 LINC01587Q99440 93 aa8.4□□□□□ -1.07
C11orf54-214ENST00000540113 PEMTQ9UBM1 199 aa8.4□□□□□ -1.07
C11orf54-214ENST00000540113 LINC01549A6NIU2 74 aa8.39□□□□□ -1.07
C11orf54-214ENST00000540113 IGLV4-3A0A075B6K6 122 aa8.39□□□□□ -1.07
C11orf54-214ENST00000540113 TEX48A0A1B0GUV7 120 aa8.39□□□□□ -1.07
C11orf54-214ENST00000540113 RHOHQ15669 191 aa8.39□□□□□ -1.07
C11orf54-214ENST00000540113 DEFB114Q30KQ6 69 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms