RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 TRGC2P03986 189 aa1.62□□□□□ -2.15
TRAV11-201ENST00000539512 CRYGSP22914 178 aa1.62□□□□□ -2.15
TRAV11-201ENST00000539512 RNASE4P34096 147 aaKnown RBP1.62□□□□□ -2.15
TRAV11-201ENST00000539512 UBE2BP63146 152 aa1.62□□□□□ -2.15
TRAV11-201ENST00000539512 SLC30A7Q8NEW0 376 aa1.62□□□□□ -2.15
TRAV11-201ENST00000539512 SKA2Q8WVK7 121 aaPredicted RBP1.62□□□□□ -2.15
TRAV11-201ENST00000539512 CDC42SE1Q9NRR8 79 aa1.62□□□□□ -2.15
TRAV11-201ENST00000539512 HSPB11Q9Y547 144 aa1.62□□□□□ -2.15
TRAV11-201ENST00000539512 ASB4Q9Y574 426 aa1.62□□□□□ -2.15
TRAV11-201ENST00000539512 PLECQ15149 4684 aaKnown RBP1.61□□□□□ -2.15
TRAV11-201ENST00000539512 HUWE1Q7Z6Z7 4374 aaKnown RBP1.61□□□□□ -2.15
TRAV11-201ENST00000539512 MYH11P35749 1972 aa1.61□□□□□ -2.15
TRAV11-201ENST00000539512 ODAMA1E959 279 aa1.61□□□□□ -2.15
TRAV11-201ENST00000539512 M0R2N4 97 aa1.61□□□□□ -2.15
TRAV11-201ENST00000539512 CNBPP62633 177 aaKnown RBP1.61□□□□□ -2.15
TRAV11-201ENST00000539512 IFT20Q8IY31 132 aa1.61□□□□□ -2.15
TRAV11-201ENST00000539512 NUP35Q8NFH5 326 aa1.61□□□□□ -2.15
TRAV11-201ENST00000539512 CANT1Q8WVQ1 401 aa1.61□□□□□ -2.15
TRAV11-201ENST00000539512 CARD19Q96LW7 228 aa1.61□□□□□ -2.15
TRAV11-201ENST00000539512 AIF1LQ9BQI0 150 aa1.61□□□□□ -2.15
TRAV11-201ENST00000539512 PRADC1Q9BSG0 188 aa1.61□□□□□ -2.15
TRAV11-201ENST00000539512 STARD9Q9P2P6 4700 aa1.61□□□□□ -2.15
TRAV11-201ENST00000539512 DYNC1H1Q14204 4646 aaKnown RBP1.6□□□□□ -2.15
TRAV11-201ENST00000539512 ALMS1Q8TCU4 4167 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 A0A0G2JMM0 328 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 A0A1W2PPB8 328 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 A0A1W2PRS3 328 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 KIR3DP1A8MWS1 328 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 ZNF736B4DX44 427 aaPredicted RBP1.6□□□□□ -2.15
TRAV11-201ENST00000539512 NDUFB3O43676 98 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 GGCTO75223 188 aaKnown RBP1.6□□□□□ -2.15
TRAV11-201ENST00000539512 CXCL1P09341 107 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 DYNLT3P51808 116 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 MSMO1Q15800 293 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 RTL8BQ17RB0 113 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 FAM74A1Q5RGS3 127 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 TOMM20LQ6UXN7 152 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 SOSTDC1Q6X4U4 206 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 TMEM254Q8TBM7 123 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 THEM6Q8WUY1 208 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 BORCS8Q96FH0 119 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 YPEL2Q96QA6 119 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 RTL8AQ9BWD3 113 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 BPESC1Q9GZL8 116 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 PKHD1P08F94 4074 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 KMT2AQ03164 3969 aa1.6□□□□□ -2.15
TRAV11-201ENST00000539512 ARFGEF3Q5TH69 2177 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 TRGV10A0A0A0MS01 117 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 GADD45GO95257 159 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 RPL7P18124 248 aaKnown RBP1.59□□□□□ -2.15
TRAV11-201ENST00000539512 TMBIM6P55061 237 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 SARNPP82979 210 aaKnown RBP1.59□□□□□ -2.15
TRAV11-201ENST00000539512 MPV17LQ2QL34 196 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 ANGPTL5Q86XS5 388 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 PDZD9Q8IXQ8 264 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 TMEM35BQ8NCS4 154 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 OR2T35Q8NGX2 323 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 BORCS5Q969J3 196 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 ZC2HC1AQ96GY0 325 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 CCDC115Q96NT0 180 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 NPCDR1Q9BY65 106 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 TMEM126AQ9H061 195 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 LAMTOR3Q9UHA4 124 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 NUBP2Q9Y5Y2 271 aa1.59□□□□□ -2.15
TRAV11-201ENST00000539512 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.16
TRAV11-201ENST00000539512 MYCBP2O75592 4640 aa1.59□□□□□ -2.16
TRAV11-201ENST00000539512 DNAH7Q8WXX0 4024 aa1.59□□□□□ -2.16
TRAV11-201ENST00000539512 DNAH11Q96DT5 4516 aa1.59□□□□□ -2.16
TRAV11-201ENST00000539512 WNK2Q9Y3S1 2297 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 FAT2Q9NYQ8 4349 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 CXorf51AA0A1B0GTR3 108 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 TRDV1A0A1B0GX56 115 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 CLPSL1A2RUU4 121 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 H7BYZ3 331 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 K7ERJ3 54 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 INE1O15225 51 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 ARPC5O15511 151 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 SCGB1A1P11684 91 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 S100A11P31949 105 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 DYNLT1P63172 113 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 C1orf140Q5VVS0 124 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 HRCT1Q6UXD1 115 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 OR9Q1Q8NGQ5 310 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 NAT14Q8WUY8 206 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 MAFIPQ8WZ33 124 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 TEX37Q96LM6 180 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 POPDC3Q9HBV1 291 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 OTORQ9NRC9 128 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 TRAPPC2LQ9UL33 140 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 DNAH3Q8TD57 4116 aa1.58□□□□□ -2.16
TRAV11-201ENST00000539512 UQCRHLA0A096LP55 91 aa1.57□□□□□ -2.16
TRAV11-201ENST00000539512 B4DSR2 109 aa1.57□□□□□ -2.16
TRAV11-201ENST00000539512 GABARAPH6UMI1 98 aa1.57□□□□□ -2.16
TRAV11-201ENST00000539512 FAM107AO95990 144 aa1.57□□□□□ -2.16
TRAV11-201ENST00000539512 OR10J4P0C629 311 aa1.57□□□□□ -2.16
TRAV11-201ENST00000539512 BCL2P10415 239 aa1.57□□□□□ -2.16
TRAV11-201ENST00000539512 RPS3P23396 243 aaKnown RBP eCLIP1.57□□□□□ -2.16
TRAV11-201ENST00000539512 POLR2HP52434 150 aaKnown RBP1.57□□□□□ -2.16
TRAV11-201ENST00000539512 EFNA4P52798 201 aa1.57□□□□□ -2.16
TRAV11-201ENST00000539512 PRB3Q04118 309 aaPredicted RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms