RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-222	ENST00000538689	LINC00315	P59091	139 aa		5.15	□□□□□ -1.58
FDFT1-222	ENST00000538689	SPATA12	Q7Z6I5	190 aa		5.15	□□□□□ -1.58
FDFT1-222	ENST00000538689	KIR2DL5A	Q8N109	375 aa		5.15	□□□□□ -1.58
FDFT1-222	ENST00000538689	CITED1	Q99966	193 aa		5.15	□□□□□ -1.58
FDFT1-222	ENST00000538689	C20orf144	Q9BQM9	153 aa		5.15	□□□□□ -1.58
FDFT1-222	ENST00000538689	VAMP8	Q9BV40	100 aa		5.15	□□□□□ -1.58
FDFT1-222	ENST00000538689	ZNF747	Q9BV97	191 aa		5.15	□□□□□ -1.58
FDFT1-222	ENST00000538689	MAP1LC3C	Q9BXW4	147 aa		5.15	□□□□□ -1.58
FDFT1-222	ENST00000538689	TRRAP	Q9Y4A5	3859 aa		5.15	□□□□□ -1.59
FDFT1-222	ENST00000538689	GAGE12B	A1L429	117 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	GAGE12H	A6NDE8	117 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	PPP1R17	O96001	155 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	HBD	P02042	147 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	SMIM17	P0DL12	118 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	RIPPLY3	P57055	190 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689		Q8N8P6	123 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	RASL10A	Q92737	203 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	C20orf78	Q9BR46	151 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	LINC00467	Q9BRT7	94 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	TRPT1	Q86TN4	253 aa	Known RBP	5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	SYT8	Q8NBV8	401 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	TMEM208	Q9BTX3	173 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	JPT2	Q9H910	190 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	PAM16	Q9Y3D7	125 aa		5.14	□□□□□ -1.59
FDFT1-222	ENST00000538689	RHOD	O00212	210 aa		5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	INS	P01308	110 aa		5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	MGP	P08493	103 aa		5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	FCER1G	P30273	86 aa		5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	ZNF876P	Q49A33	203 aa		5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	VWF	P04275	2813 aa		5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	C20orf202	A1L168	122 aa		5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	CRYGD	P07320	174 aa		5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	HTN1	P15515	57 aa		5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	LINC01545	Q5VT33	79 aa		5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	RPL39L	Q96EH5	51 aa	Known RBP	5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	SMIM2	Q9BVW6	85 aa		5.13	□□□□□ -1.59
FDFT1-222	ENST00000538689	TRAV9-2	A0A087WT02	112 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689		K7EMI3	77 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689	LAGE3	Q14657	143 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689	PIK3CD-AS1	Q5SR53	167 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689	LINC01587	Q99440	93 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689	NDUFAF3	Q9BU61	184 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689	TMEM238	C9JI98	176 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689	RPL32	P62910	135 aa	Known RBP	5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689	ATOH7	Q8N100	152 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689	TMEM158	Q8WZ71	300 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689	PTH2	Q96A98	100 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689	IFI27L1	Q96BM0	104 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689	XCL2	Q9UBD3	114 aa		5.12	□□□□□ -1.59
FDFT1-222	ENST00000538689		M0R2P5	195 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	PRM2	P04554	102 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	ZNF415	Q09FC8	603 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	SPATA45	Q537H7	98 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	SUMO4	Q6EEV6	95 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	ZNF705A	Q6ZN79	300 aa	Predicted RBP	5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	C11orf72	Q8NBR9	251 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	INSL3	P51460	131 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	ORMDL2	Q53FV1	153 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	FAM74A4	Q5TZK3	123 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	C1orf158	Q8N1D5	194 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	MIEN1	Q9BRT3	115 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	ST20	Q9HBF5	79 aa		5.11	□□□□□ -1.59
FDFT1-222	ENST00000538689	NACA	E9PAV3	2078 aa		5.1	□□□□□ -1.59
FDFT1-222	ENST00000538689	TRBV6-5	A0A0K0K1A5	114 aa		5.1	□□□□□ -1.59
FDFT1-222	ENST00000538689		M0QY20	66 aa		5.1	□□□□□ -1.59
FDFT1-222	ENST00000538689	GIG44	P09565	113 aa	Predicted RBP	5.1	□□□□□ -1.59
FDFT1-222	ENST00000538689	POLR2K	P53803	58 aa	Known RBP	5.1	□□□□□ -1.59
FDFT1-222	ENST00000538689	LGALS9B	Q3B8N2	356 aa		5.1	□□□□□ -1.59
FDFT1-222	ENST00000538689	LGALS9C	Q6DKI2	356 aa		5.1	□□□□□ -1.59
FDFT1-222	ENST00000538689	MCRIP2	Q9BUT9	160 aa	Known RBP	5.1	□□□□□ -1.59
FDFT1-222	ENST00000538689	CSTL1	Q9H114	145 aa		5.1	□□□□□ -1.59
FDFT1-222	ENST00000538689	TRBV27	A0A0K0K1C4	114 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689		A8MWV9	139 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	NUDT3	O95989	172 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	IGLC3	P0DOY3	106 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	IGLL1	P15814	213 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	HERV-K104	P63124	156 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	ZNF56	Q15929	161 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	UFSP1	Q6NVU6	142 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	C18orf15	Q96N68	181 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	WFDC10A	Q9H1F0	79 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	EDA2R	Q9HAV5	297 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	ATP5L	O75964	103 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	TOMM6	Q96B49	74 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	PMCHL2	Q9BQD1	86 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689		Q9H8V8	135 aa		5.09	□□□□□ -1.59
FDFT1-222	ENST00000538689	SDHAF1	A6NFY7	115 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	AZU1	P20160	251 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	GAGE2B	Q13066	116 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	KRTAP21-3	Q3LHN1	58 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	GAGE2E	Q4V326	116 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	GAGE2A	Q6NT46	116 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	MORN3	Q6PF18	240 aa	Predicted RBP	5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	CD164L2	Q6UWJ8	174 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	KIR2DL4	Q99706	377 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	C1QTNF4	Q9BXJ3	329 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	SNHG12	Q9BXW3	62 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	UQCR10	Q9UDW1	63 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	GAGE2D	Q9UEU5	116 aa		5.08	□□□□□ -1.6
FDFT1-222	ENST00000538689	LINC01549	A6NIU2	74 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms