RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 M0QY20 66 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 VCYO14598 125 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 TSHBP01222 138 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 RBMY1A1P0DJD3 496 aaKnown RBP6.8□□□□□ -1.32
DDB1-211ENST00000538280 RBMY1CP0DJD4 496 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 TCTAP57738 103 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 RBMY1FQ15415 496 aaKnown RBP6.8□□□□□ -1.32
DDB1-211ENST00000538280 MAPKAPK5-AS1Q8N8E1 139 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 PTH2Q96A98 100 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 TIMM17AQ99595 171 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 SPAG8Q99932 426 aaPredicted RBP6.8□□□□□ -1.32
DDB1-211ENST00000538280 LINC00467Q9BRT7 94 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 TM2D2Q9BX73 214 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 TTTY13Q9BZ97 58 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 PEMTQ9UBM1 199 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 CYSLTR1Q9Y271 337 aa6.8□□□□□ -1.32
DDB1-211ENST00000538280 A0A087WWL8 130 aa6.79□□□□□ -1.32
DDB1-211ENST00000538280 RBMY1BA6NDE4 496 aaKnown RBP6.79□□□□□ -1.32
DDB1-211ENST00000538280 RBMY1EA6NEQ0 496 aaKnown RBP6.79□□□□□ -1.32
DDB1-211ENST00000538280 PRSS29PA6NIE9 313 aa6.79□□□□□ -1.32
DDB1-211ENST00000538280 H3BMM0 161 aa6.79□□□□□ -1.32
DDB1-211ENST00000538280 RBMY1DP0C7P1 496 aaKnown RBP6.79□□□□□ -1.32
DDB1-211ENST00000538280 RHOHQ15669 191 aa6.79□□□□□ -1.32
DDB1-211ENST00000538280 VAMP3Q15836 100 aa6.79□□□□□ -1.32
DDB1-211ENST00000538280 NSUN5P1Q3KNT7 163 aa6.79□□□□□ -1.32
DDB1-211ENST00000538280 PIK3CD-AS1Q5SR53 167 aa6.79□□□□□ -1.32
DDB1-211ENST00000538280 TMEM141Q96I45 108 aa6.79□□□□□ -1.32
DDB1-211ENST00000538280 CLUHP3Q96NS8 147 aa6.79□□□□□ -1.32
DDB1-211ENST00000538280 SDHAF1A6NFY7 115 aa6.78□□□□□ -1.32
DDB1-211ENST00000538280 E9PLD3 99 aa6.78□□□□□ -1.32
DDB1-211ENST00000538280 IGKV3-20P01619 116 aa6.78□□□□□ -1.32
DDB1-211ENST00000538280 DEFB131AP59861 70 aa6.78□□□□□ -1.32
DDB1-211ENST00000538280 DEFB136Q30KP8 78 aa6.78□□□□□ -1.32
DDB1-211ENST00000538280 AMMECR1LQ6DCA0 310 aa6.78□□□□□ -1.32
DDB1-211ENST00000538280 UFSP1Q6NVU6 142 aa6.78□□□□□ -1.32
DDB1-211ENST00000538280 Q6ZSV7 163 aa6.78□□□□□ -1.32
DDB1-211ENST00000538280 NEGR1Q7Z3B1 354 aa6.78□□□□□ -1.32
DDB1-211ENST00000538280 TRPT1Q86TN4 253 aaKnown RBP6.78□□□□□ -1.32
DDB1-211ENST00000538280 TP53TG1Q9Y2A0 90 aa6.78□□□□□ -1.32
DDB1-211ENST00000538280 IGLV4-69A0A075B6H9 119 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 TRBV7-3A0A075B6L6 115 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 KNCNA6PVL3 124 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 FXYD2P54710 66 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 PAPPA-AS1Q5QFB9 102 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 TMEM61Q8N0U2 210 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 CEND1Q8N111 149 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 OR11H1Q8NG94 326 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 OR4C5Q8NGB2 326 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 PHLDA1Q8WV24 401 aaPredicted RBP6.77□□□□□ -1.33
DDB1-211ENST00000538280 DLX4Q92988 240 aaPredicted RBP6.77□□□□□ -1.33
DDB1-211ENST00000538280 KIR2DL4Q99706 377 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 MAP6D1Q9H9H5 199 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 ESM1Q9NQ30 184 aa6.77□□□□□ -1.33
DDB1-211ENST00000538280 TRAV25A0A0B4J276 109 aa6.76□□□□□ -1.33
DDB1-211ENST00000538280 MYMXA0A1B0GTQ4 84 aa6.76□□□□□ -1.33
DDB1-211ENST00000538280 DNAJC9-AS1A6NH13 148 aa6.76□□□□□ -1.33
DDB1-211ENST00000538280 OR11H12B2RN74 326 aa6.76□□□□□ -1.33
DDB1-211ENST00000538280 K7EP34 96 aa6.76□□□□□ -1.33
DDB1-211ENST00000538280 FHL3Q13643 280 aa6.76□□□□□ -1.33
DDB1-211ENST00000538280 PMVKQ15126 192 aa6.76□□□□□ -1.33
DDB1-211ENST00000538280 ZNF56Q15929 161 aa6.76□□□□□ -1.33
DDB1-211ENST00000538280 DEFB114Q30KQ6 69 aa6.76□□□□□ -1.33
DDB1-211ENST00000538280 C3orf56Q8N813 242 aa6.76□□□□□ -1.33
DDB1-211ENST00000538280 OR11H2Q8NH07 326 aa6.76□□□□□ -1.33
DDB1-211ENST00000538280 F5H697 171 aa6.75□□□□□ -1.33
DDB1-211ENST00000538280 P0DMU3 169 aa6.75□□□□□ -1.33
DDB1-211ENST00000538280 FAM231AP0DMU4 169 aa6.75□□□□□ -1.33
DDB1-211ENST00000538280 FAM231CP0DMU5 169 aa6.75□□□□□ -1.33
DDB1-211ENST00000538280 HILS1P60008 231 aa6.75□□□□□ -1.33
DDB1-211ENST00000538280 ZNF876PQ49A33 203 aa6.75□□□□□ -1.33
DDB1-211ENST00000538280 FAM74A4Q5TZK3 123 aa6.75□□□□□ -1.33
DDB1-211ENST00000538280 KLHL30-AS1Q8NEE0 82 aa6.75□□□□□ -1.33
DDB1-211ENST00000538280 CST9LQ9H4G1 147 aa6.75□□□□□ -1.33
DDB1-211ENST00000538280 A0A1B0GWB2 263 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 A0A1W2PPM0 123 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 C11orf86A6NJI1 115 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 H3BUT2 72 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 I3L3M4 83 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 SMIM13P0DJ93 91 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 GCSHP23434 173 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 RPL39P62891 51 aaKnown RBP6.74□□□□□ -1.33
DDB1-211ENST00000538280 ZNF415Q09FC8 603 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 NFE4Q86UQ8 179 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 C11orf72Q8NBR9 251 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 DYNLRB2Q8TF09 96 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 DUX3Q96PT4 197 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 PRADC1Q9BSG0 188 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 RYR3Q15413 4870 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 VWFP04275 2813 aa6.74□□□□□ -1.33
DDB1-211ENST00000538280 A8MWV9 139 aa6.73□□□□□ -1.33
DDB1-211ENST00000538280 M0R2P5 195 aa6.73□□□□□ -1.33
DDB1-211ENST00000538280 BEAN1Q3B7T3 259 aa6.73□□□□□ -1.33
DDB1-211ENST00000538280 GTF2H5Q6ZYL4 71 aa6.73□□□□□ -1.33
DDB1-211ENST00000538280 C20orf203Q8NBC4 194 aa6.73□□□□□ -1.33
DDB1-211ENST00000538280 IL17DQ8TAD2 202 aa6.73□□□□□ -1.33
DDB1-211ENST00000538280 RNASE8Q8TDE3 154 aaKnown RBP6.73□□□□□ -1.33
DDB1-211ENST00000538280 RAX2Q96IS3 184 aa6.73□□□□□ -1.33
DDB1-211ENST00000538280 C16orf95Q9H693 158 aa6.73□□□□□ -1.33
DDB1-211ENST00000538280 KMT2CQ8NEZ4 4911 aaKnown RBP6.73□□□□□ -1.33
DDB1-211ENST00000538280 GAGE10A6NGK3 116 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms