RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 INAFM2P0DMQ5 153 aa8.41□□□□□ -1.06
PRKDC-207ENST00000536483 XGP55808 180 aa8.41□□□□□ -1.06
PRKDC-207ENST00000536483 ERVFC1-1P60608 527 aa8.41□□□□□ -1.06
PRKDC-207ENST00000536483 SNRPEP62304 92 aaKnown RBP8.41□□□□□ -1.06
PRKDC-207ENST00000536483 CENPWQ5EE01 88 aa8.41□□□□□ -1.06
PRKDC-207ENST00000536483 LINC01556Q5JQF7 62 aa8.41□□□□□ -1.06
PRKDC-207ENST00000536483 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
PRKDC-207ENST00000536483 WFDC10BQ8IUB3 73 aa8.41□□□□□ -1.06
PRKDC-207ENST00000536483 ZFP82Q8N141 532 aa8.41□□□□□ -1.06
PRKDC-207ENST00000536483 DMBT1Q9UGM3 2413 aaPredicted RBP8.41□□□□□ -1.06
PRKDC-207ENST00000536483 MYCBP2O75592 4640 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 GRIFINA4D1Z8 144 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 PHOX2AO14813 284 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 SNAI2O43623 268 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 TRGC2P03986 189 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 OR5AL1P0C617 328 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 EVI2AP22794 236 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 COA6Q5JTJ3 125 aaKnown RBP8.4□□□□□ -1.06
PRKDC-207ENST00000536483 LELP1Q5T871 98 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 RASL11AQ6T310 242 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 C10orf126Q8N4M7 172 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 SAMD10Q9BYL1 202 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 GTSF1LQ9H1H1 148 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 JPT2Q9H910 190 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 PHLDA3Q9Y5J5 127 aa8.4□□□□□ -1.06
PRKDC-207ENST00000536483 IGHV3-73A0A0B4J1V6 119 aa8.39□□□□□ -1.07
PRKDC-207ENST00000536483 IGHV3-38A0A0C4DH36 116 aa8.39□□□□□ -1.07
PRKDC-207ENST00000536483 IGLV2-8P01709 118 aa8.39□□□□□ -1.07
PRKDC-207ENST00000536483 CDPF1Q6NVV7 123 aa8.39□□□□□ -1.07
PRKDC-207ENST00000536483 NHLRC2Q8NBF2 726 aa8.39□□□□□ -1.07
PRKDC-207ENST00000536483 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
PRKDC-207ENST00000536483 TRAV8-6A0A0B4J262 113 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 TRBV10-1A0A0K0K1A3 114 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 K7EN84 100 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 HIST1H2BKO60814 126 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 MT-ND6P03923 174 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 HIST1H2BJP06899 126 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 TRGC1P0CF51 173 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 HIST1H2BOP23527 126 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 HIST1H2BBP33778 126 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 HIST1H2BDP58876 126 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 KRTAP10-1P60331 282 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 HIST1H2BCP62807 126 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 FABP9Q0Z7S8 132 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 HIST2H2BEQ16778 126 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 CT83Q5H943 113 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-207ENST00000536483 Q5VSD8 79 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 WDR73Q6P4I2 378 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 LINC00518Q8N0U6 118 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 HIST1H2BHQ93079 126 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 HIST1H2BNQ99877 126 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 HIST1H2BMQ99879 126 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 MSRB1Q9NZV6 116 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 V9GYV3 84 aa8.38□□□□□ -1.07
PRKDC-207ENST00000536483 A0A087WTM6 91 aa8.37□□□□□ -1.07
PRKDC-207ENST00000536483 TMSB15BA0A087X1C1 80 aa8.37□□□□□ -1.07
PRKDC-207ENST00000536483 C19orf71A6NCJ1 209 aa8.37□□□□□ -1.07
PRKDC-207ENST00000536483 FAM231BA6NCW3 169 aa8.37□□□□□ -1.07
PRKDC-207ENST00000536483 IBA57-AS1B1ANH7 110 aa8.37□□□□□ -1.07
PRKDC-207ENST00000536483 SMIM6P0DI80 62 aa8.37□□□□□ -1.07
PRKDC-207ENST00000536483 C14orf178Q8N769 122 aaPredicted RBP8.37□□□□□ -1.07
PRKDC-207ENST00000536483 Q9UF83 564 aa8.37□□□□□ -1.07
PRKDC-207ENST00000536483 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
PRKDC-207ENST00000536483 SMIM27A0A1W2PRY6 76 aa8.36□□□□□ -1.07
PRKDC-207ENST00000536483 AKR1D1P51857 326 aa8.36□□□□□ -1.07
PRKDC-207ENST00000536483 NDUFA6P56556 154 aa8.36□□□□□ -1.07
PRKDC-207ENST00000536483 PRR27Q6MZM9 219 aa8.36□□□□□ -1.07
PRKDC-207ENST00000536483 FRZBQ92765 325 aa8.36□□□□□ -1.07
PRKDC-207ENST00000536483 GNB1LQ9BYB4 327 aa8.36□□□□□ -1.07
PRKDC-207ENST00000536483 TRAPPC1Q9Y5R8 145 aa8.36□□□□□ -1.07
PRKDC-207ENST00000536483 M0R381 172 aa8.35□□□□□ -1.07
PRKDC-207ENST00000536483 GATCO43716 136 aaKnown RBP8.35□□□□□ -1.07
PRKDC-207ENST00000536483 IGLC6P0CF74 106 aa8.35□□□□□ -1.07
PRKDC-207ENST00000536483 RAB4BP61018 213 aa8.35□□□□□ -1.07
PRKDC-207ENST00000536483 LAGE3Q14657 143 aa8.35□□□□□ -1.07
PRKDC-207ENST00000536483 OR10AG1Q8NH19 301 aa8.35□□□□□ -1.07
PRKDC-207ENST00000536483 GFRA4Q9GZZ7 299 aa8.35□□□□□ -1.07
PRKDC-207ENST00000536483 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
PRKDC-207ENST00000536483 GAGE12JA6NER3 117 aa8.34□□□□□ -1.07
PRKDC-207ENST00000536483 SMR3BP02814 79 aaPredicted RBP8.34□□□□□ -1.07
PRKDC-207ENST00000536483 S100A2P29034 98 aa8.34□□□□□ -1.07
PRKDC-207ENST00000536483 RPS20P60866 119 aaKnown RBP8.34□□□□□ -1.07
PRKDC-207ENST00000536483 GAGE1Q13065 139 aa8.34□□□□□ -1.07
PRKDC-207ENST00000536483 GAGE4Q13068 117 aa8.34□□□□□ -1.07
PRKDC-207ENST00000536483 GAGE5Q13069 117 aa8.34□□□□□ -1.07
PRKDC-207ENST00000536483 GAGE13Q4V321 117 aa8.34□□□□□ -1.07
PRKDC-207ENST00000536483 OR10J3Q5JRS4 329 aa8.34□□□□□ -1.07
PRKDC-207ENST00000536483 ATP5L2Q7Z4Y8 100 aa8.34□□□□□ -1.07
PRKDC-207ENST00000536483 KIF25-AS1Q9Y6Z4 181 aa8.34□□□□□ -1.07
PRKDC-207ENST00000536483 A0A087WWL8 130 aa8.33□□□□□ -1.08
PRKDC-207ENST00000536483 A8MWL6 223 aa8.33□□□□□ -1.08
PRKDC-207ENST00000536483 UBE2D3P61077 147 aa8.33□□□□□ -1.08
PRKDC-207ENST00000536483 UBE2D2P62837 147 aa8.33□□□□□ -1.08
PRKDC-207ENST00000536483 S100A12P80511 92 aa8.33□□□□□ -1.08
PRKDC-207ENST00000536483 TSKUQ8WUA8 353 aa8.33□□□□□ -1.08
PRKDC-207ENST00000536483 DAZAP1Q96EP5 407 aaKnown RBP8.33□□□□□ -1.08
PRKDC-207ENST00000536483 NAT8BQ9UHF3 227 aa8.33□□□□□ -1.08
PRKDC-207ENST00000536483 TRBV7-3A0A075B6L6 115 aa8.32□□□□□ -1.08
PRKDC-207ENST00000536483 F2Z2F3 143 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 207.5 ms