RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 LAGE3Q14657 143 aa14.34□□□□□ -0.11
PKP3-211ENST00000534401 DPH3P1Q9H4G8 78 aa14.34□□□□□ -0.11
PKP3-211ENST00000534401 FAM231BA6NCW3 169 aa14.33□□□□□ -0.12
PKP3-211ENST00000534401 ERVFC1-1P60608 527 aa14.33□□□□□ -0.12
PKP3-211ENST00000534401 PEA15Q15121 130 aa14.33□□□□□ -0.12
PKP3-211ENST00000534401 NIT1Q86X76 327 aa14.33□□□□□ -0.12
PKP3-211ENST00000534401 Q8N3U1 123 aa14.33□□□□□ -0.12
PKP3-211ENST00000534401 DNAJC30Q96LL9 226 aa14.33□□□□□ -0.12
PKP3-211ENST00000534401 TMEM241Q24JQ0 296 aa14.32□□□□□ -0.12
PKP3-211ENST00000534401 SUMO4Q6EEV6 95 aa14.32□□□□□ -0.12
PKP3-211ENST00000534401 GFRA4Q9GZZ7 299 aa14.32□□□□□ -0.12
PKP3-211ENST00000534401 PCLOQ9Y6V0 5065 aa14.31□□□□□ -0.12
PKP3-211ENST00000534401 TRBV6-8A0A0A6YYG3 113 aa14.31□□□□□ -0.12
PKP3-211ENST00000534401 IGHV3-30P01768 117 aa14.31□□□□□ -0.12
PKP3-211ENST00000534401 IGHV3-33P01772 117 aa14.31□□□□□ -0.12
PKP3-211ENST00000534401 IGHV3-30-3P0DP02 117 aa14.31□□□□□ -0.12
PKP3-211ENST00000534401 IGHV3-30-5P0DP03 117 aa14.31□□□□□ -0.12
PKP3-211ENST00000534401 ISOC2Q96AB3 205 aa14.31□□□□□ -0.12
PKP3-211ENST00000534401 CHCHD7Q9BUK0 85 aa14.31□□□□□ -0.12
PKP3-211ENST00000534401 H7C1H1 209 aa14.3□□□□□ -0.12
PKP3-211ENST00000534401 RPL23P62829 140 aaKnown RBP14.3□□□□□ -0.12
PKP3-211ENST00000534401 TWIST1Q15672 202 aa14.3□□□□□ -0.12
PKP3-211ENST00000534401 NTM-AS1Q6ZSK4 140 aa14.3□□□□□ -0.12
PKP3-211ENST00000534401 DAZ4Q86SG3 579 aaKnown RBP14.3□□□□□ -0.12
PKP3-211ENST00000534401 TSKUQ8WUA8 353 aa14.3□□□□□ -0.12
PKP3-211ENST00000534401 DAZ3Q9NR90 486 aaKnown RBP14.3□□□□□ -0.12
PKP3-211ENST00000534401 V9GYV3 84 aa14.3□□□□□ -0.12
PKP3-211ENST00000534401 KIAA1109Q2LD37 5005 aa14.3□□□□□ -0.12
PKP3-211ENST00000534401 MGPP08493 103 aa14.29□□□□□ -0.12
PKP3-211ENST00000534401 KRTAP10-2P60368 255 aa14.29□□□□□ -0.12
PKP3-211ENST00000534401 TMEM97Q5BJF2 176 aa14.29□□□□□ -0.12
PKP3-211ENST00000534401 RASL11AQ6T310 242 aa14.29□□□□□ -0.12
PKP3-211ENST00000534401 A0A087WTM6 91 aa14.28□□□□□ -0.12
PKP3-211ENST00000534401 SPATA12Q7Z6I5 190 aa14.28□□□□□ -0.12
PKP3-211ENST00000534401 FRZBQ92765 325 aa14.28□□□□□ -0.12
PKP3-211ENST00000534401 NAT8Q9UHE5 227 aa14.28□□□□□ -0.12
PKP3-211ENST00000534401 PGLYRP4Q96LB8 373 aa14.27□□□□□ -0.13
PKP3-211ENST00000534401 NIT2Q9NQR4 276 aa14.27□□□□□ -0.13
PKP3-211ENST00000534401 LRCOL1A6NCL2 159 aa14.26□□□□□ -0.13
PKP3-211ENST00000534401 LRP1BQ9NZR2 4599 aa14.25□□□□□ -0.13
PKP3-211ENST00000534401 HIGD1CA8MV81 97 aa14.25□□□□□ -0.13
PKP3-211ENST00000534401 C15orf54Q8N8G6 183 aa14.25□□□□□ -0.13
PKP3-211ENST00000534401 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.25□□□□□ -0.13
PKP3-211ENST00000534401 GATD1Q8NB37 220 aa14.25□□□□□ -0.13
PKP3-211ENST00000534401 TRAV8-3A0A0A6YYJ7 113 aa14.24□□□□□ -0.13
PKP3-211ENST00000534401 C16orf90A8MZG2 172 aa14.24□□□□□ -0.13
PKP3-211ENST00000534401 IQCJQ1A5X6 159 aa14.24□□□□□ -0.13
PKP3-211ENST00000534401 PGPEP1Q9NXJ5 209 aa14.24□□□□□ -0.13
PKP3-211ENST00000534401 DNAH5Q8TE73 4624 aa14.23□□□□□ -0.13
PKP3-211ENST00000534401 A0A1B0GUT8 65 aa14.23□□□□□ -0.13
PKP3-211ENST00000534401 ATRAIDQ6UW56 229 aa14.22□□□□□ -0.13
PKP3-211ENST00000534401 Q9HAA7 133 aa14.22□□□□□ -0.13
PKP3-211ENST00000534401 A0A087WX48 190 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 EREGO14944 169 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 PKIAP61925 76 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 IFITM2Q01629 132 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 ELOBQ15370 118 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 ADIRFQ15847 76 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 CLLU1Q5K131 121 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 SMIM15Q7Z3B0 74 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 NUP35Q8NFH5 326 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 TM2D2Q9BX73 214 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 TMEM191AQ9H0A3 160 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 URGCP-MRPS24S4R325 110 aa14.21□□□□□ -0.13
PKP3-211ENST00000534401 SMIM27A0A1W2PRY6 76 aa14.2□□□□□ -0.14
PKP3-211ENST00000534401 RAB14P61106 215 aa14.2□□□□□ -0.14
PKP3-211ENST00000534401 CDPF1Q6NVV7 123 aa14.2□□□□□ -0.14
PKP3-211ENST00000534401 KLK12Q9UKR0 248 aa14.2□□□□□ -0.14
PKP3-211ENST00000534401 TRBV25-1A0A075B6N4 114 aa14.18□□□□□ -0.14
PKP3-211ENST00000534401 TRAV26-2A0A0B4J265 109 aa14.18□□□□□ -0.14
PKP3-211ENST00000534401 IGHV1-24A0A0C4DH33 117 aa14.18□□□□□ -0.14
PKP3-211ENST00000534401 MPV17L2Q567V2 206 aa14.18□□□□□ -0.14
PKP3-211ENST00000534401 MAPKAPK5-AS1Q8N8E1 139 aa14.18□□□□□ -0.14
PKP3-211ENST00000534401 BORCS7Q96B45 105 aa14.18□□□□□ -0.14
PKP3-211ENST00000534401 RYR1P21817 5038 aa14.17□□□□□ -0.14
PKP3-211ENST00000534401 TRBV6-5A0A0K0K1A5 114 aa14.17□□□□□ -0.14
PKP3-211ENST00000534401 CDK2AP2O75956 126 aa14.17□□□□□ -0.14
PKP3-211ENST00000534401 KCNIP4Q6PIL6 250 aa14.17□□□□□ -0.14
PKP3-211ENST00000534401 RNF185Q96GF1 192 aa14.17□□□□□ -0.14
PKP3-211ENST00000534401 CHCHD5Q9BSY4 110 aa14.17□□□□□ -0.14
PKP3-211ENST00000534401 NAT8BQ9UHF3 227 aa14.17□□□□□ -0.14
PKP3-211ENST00000534401 COX11Q9Y6N1 276 aa14.17□□□□□ -0.14
PKP3-211ENST00000534401 PSCAO43653 123 aa14.16□□□□□ -0.14
PKP3-211ENST00000534401 ENHOQ6UWT2 76 aa14.16□□□□□ -0.14
PKP3-211ENST00000534401 PRR34Q9NV39 138 aa14.16□□□□□ -0.14
PKP3-211ENST00000534401 TMEM262E9PQX1 116 aa14.15□□□□□ -0.14
PKP3-211ENST00000534401 RAB4AP20338 218 aa14.15□□□□□ -0.14
PKP3-211ENST00000534401 RBX1P62877 108 aa14.15□□□□□ -0.14
PKP3-211ENST00000534401 Q0VG73 95 aa14.15□□□□□ -0.14
PKP3-211ENST00000534401 RIGQ13278 110 aa14.15□□□□□ -0.14
PKP3-211ENST00000534401 RPL39LQ96EH5 51 aaKnown RBP14.15□□□□□ -0.14
PKP3-211ENST00000534401 A0A1B0GUV1 79 aa14.14□□□□□ -0.15
PKP3-211ENST00000534401 UBE2WQ96B02 151 aa14.14□□□□□ -0.15
PKP3-211ENST00000534401 RMI2Q96E14 147 aa14.14□□□□□ -0.15
PKP3-211ENST00000534401 GAS8-AS1O95177 125 aa14.13□□□□□ -0.15
PKP3-211ENST00000534401 Q8N976 141 aa14.13□□□□□ -0.15
PKP3-211ENST00000534401 TMEM243Q9BU79 118 aa14.13□□□□□ -0.15
PKP3-211ENST00000534401 NCR2O95944 276 aa14.12□□□□□ -0.15
PKP3-211ENST00000534401 GAGE6Q13070 117 aa14.12□□□□□ -0.15
PKP3-211ENST00000534401 COTL1Q14019 142 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms