RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 C20orf78Q9BR46 151 aa11.75□□□□□ -0.53
ATP2C1-224ENST00000533801 GAGE10A6NGK3 116 aa11.75□□□□□ -0.53
ATP2C1-224ENST00000533801 RBMY1BA6NDE4 496 aaKnown RBP11.75□□□□□ -0.53
ATP2C1-224ENST00000533801 RBMY1EA6NEQ0 496 aaKnown RBP11.75□□□□□ -0.53
ATP2C1-224ENST00000533801 VCYO14598 125 aa11.75□□□□□ -0.53
ATP2C1-224ENST00000533801 RBMY1DP0C7P1 496 aaKnown RBP11.75□□□□□ -0.53
ATP2C1-224ENST00000533801 SAMD13Q5VXD3 122 aa11.75□□□□□ -0.53
ATP2C1-224ENST00000533801 STHQ8IWL8 128 aa11.74□□□□□ -0.53
ATP2C1-224ENST00000533801 MAP6D1Q9H9H5 199 aa11.74□□□□□ -0.53
ATP2C1-224ENST00000533801 H3BMM0 161 aa11.74□□□□□ -0.53
ATP2C1-224ENST00000533801 FSHBP01225 129 aa11.74□□□□□ -0.53
ATP2C1-224ENST00000533801 SRSF9Q13242 221 aaKnown RBP eCLIP11.74□□□□□ -0.53
ATP2C1-224ENST00000533801 TEP1Q99973 2627 aaKnown RBP11.74□□□□□ -0.53
ATP2C1-224ENST00000533801 J3QKU1 62 aa11.74□□□□□ -0.53
ATP2C1-224ENST00000533801 CCL24O00175 119 aa11.74□□□□□ -0.53
ATP2C1-224ENST00000533801 TOMM6Q96B49 74 aa11.74□□□□□ -0.53
ATP2C1-224ENST00000533801 ZNF815PA8K554 130 aa11.73□□□□□ -0.53
ATP2C1-224ENST00000533801 LINC00315P59091 139 aa11.73□□□□□ -0.53
ATP2C1-224ENST00000533801 MTURNQ8N3F0 131 aa11.73□□□□□ -0.53
ATP2C1-224ENST00000533801 PRADC1Q9BSG0 188 aa11.73□□□□□ -0.53
ATP2C1-224ENST00000533801 TRGV11A0A075B6L2 103 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 LGALS9O00182 355 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 CRYGDP07320 174 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 HLA-DRB4P13762 266 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 PLNP26678 52 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 HLA-DRB4X5D2U9 266 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 C4orf3Q8WVX3 66 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 TNFRSF18Q9Y5U5 241 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 KIF25-AS1Q9Y6Z4 181 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 TMEM89A2RUT3 159 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 C11orf86A6NJI1 115 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 GAGE1Q13065 139 aa11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 SPAG8Q99932 426 aaPredicted RBP11.72□□□□□ -0.53
ATP2C1-224ENST00000533801 TRGV1A0A0A0MS02 117 aa11.71□□□□□ -0.53
ATP2C1-224ENST00000533801 DEFB114Q30KQ6 69 aa11.71□□□□□ -0.53
ATP2C1-224ENST00000533801 PPP1R17O96001 155 aa11.71□□□□□ -0.53
ATP2C1-224ENST00000533801 AMTNQ6UX39 209 aa11.71□□□□□ -0.53
ATP2C1-224ENST00000533801 ZNF580Q9UK33 172 aa11.71□□□□□ -0.53
ATP2C1-224ENST00000533801 SEC11AP67812 179 aa11.71□□□□□ -0.54
ATP2C1-224ENST00000533801 ADARB2-AS1A8MUL3 147 aa11.7□□□□□ -0.54
ATP2C1-224ENST00000533801 M0QY20 66 aa11.7□□□□□ -0.54
ATP2C1-224ENST00000533801 SMIM13P0DJ93 91 aa11.7□□□□□ -0.54
ATP2C1-224ENST00000533801 AZU1P20160 251 aa11.7□□□□□ -0.54
ATP2C1-224ENST00000533801 LRRC75A-AS1Q8N1F1 130 aa11.7□□□□□ -0.54
ATP2C1-224ENST00000533801 NEXN-AS1Q8NBZ9 246 aa11.7□□□□□ -0.54
ATP2C1-224ENST00000533801 RNASE8Q8TDE3 154 aaKnown RBP11.7□□□□□ -0.54
ATP2C1-224ENST00000533801 C9orf85Q96MD7 179 aa11.69□□□□□ -0.54
ATP2C1-224ENST00000533801 APOMO95445 188 aa11.69□□□□□ -0.54
ATP2C1-224ENST00000533801 CBY1Q9Y3M2 126 aa11.69□□□□□ -0.54
ATP2C1-224ENST00000533801 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.68□□□□□ -0.54
ATP2C1-224ENST00000533801 IGKV2-29A2NJV5 120 aaPredicted RBP11.68□□□□□ -0.54
ATP2C1-224ENST00000533801 MED14OSP0DP75 135 aa11.68□□□□□ -0.54
ATP2C1-224ENST00000533801 SPCS1Q9Y6A9 102 aa11.68□□□□□ -0.54
ATP2C1-224ENST00000533801 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
ATP2C1-224ENST00000533801 MORN3Q6PF18 240 aaPredicted RBP11.68□□□□□ -0.54
ATP2C1-224ENST00000533801 TRPT1Q86TN4 253 aaKnown RBP11.68□□□□□ -0.54
ATP2C1-224ENST00000533801 PDZD2O15018 2839 aa11.67□□□□□ -0.54
ATP2C1-224ENST00000533801 POLR2KP53803 58 aaKnown RBP11.67□□□□□ -0.54
ATP2C1-224ENST00000533801 Q6ZSN1 163 aa11.67□□□□□ -0.54
ATP2C1-224ENST00000533801 H7C2G1 150 aa11.67□□□□□ -0.54
ATP2C1-224ENST00000533801 TSHBP01222 138 aa11.67□□□□□ -0.54
ATP2C1-224ENST00000533801 PLEKHB2Q96CS7 222 aa11.67□□□□□ -0.54
ATP2C1-224ENST00000533801 PLA2G2AP14555 144 aa11.67□□□□□ -0.54
ATP2C1-224ENST00000533801 LINC01006Q8NI28 216 aa11.67□□□□□ -0.54
ATP2C1-224ENST00000533801 ZMAT4Q9H898 229 aa11.67□□□□□ -0.54
ATP2C1-224ENST00000533801 INSP01308 110 aa11.66□□□□□ -0.54
ATP2C1-224ENST00000533801 PMVKQ15126 192 aa11.66□□□□□ -0.54
ATP2C1-224ENST00000533801 VPS25Q9BRG1 176 aa11.66□□□□□ -0.54
ATP2C1-224ENST00000533801 SPXQ9BT56 116 aa11.66□□□□□ -0.54
ATP2C1-224ENST00000533801 VCX2Q9H322 139 aa11.66□□□□□ -0.54
ATP2C1-224ENST00000533801 ODF3L2Q3SX64 289 aa11.66□□□□□ -0.54
ATP2C1-224ENST00000533801 OTOGQ6ZRI0 2925 aa11.66□□□□□ -0.54
ATP2C1-224ENST00000533801 VWFP04275 2813 aa11.66□□□□□ -0.54
ATP2C1-224ENST00000533801 A0A0J9YXV3 536 aa11.66□□□□□ -0.54
ATP2C1-224ENST00000533801 ZNF415Q09FC8 603 aa11.66□□□□□ -0.54
ATP2C1-224ENST00000533801 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
ATP2C1-224ENST00000533801 SAMD5Q5TGI4 173 aa11.65□□□□□ -0.54
ATP2C1-224ENST00000533801 MYMXA0A1B0GTQ4 84 aa11.65□□□□□ -0.54
ATP2C1-224ENST00000533801 GAGE12BA1L429 117 aa11.65□□□□□ -0.54
ATP2C1-224ENST00000533801 FABP2P12104 132 aa11.65□□□□□ -0.54
ATP2C1-224ENST00000533801 HERVK_113P61574 105 aa11.65□□□□□ -0.54
ATP2C1-224ENST00000533801 CST9LQ9H4G1 147 aa11.65□□□□□ -0.54
ATP2C1-224ENST00000533801 AKAP9Q99996 3911 aa11.64□□□□□ -0.55
ATP2C1-224ENST00000533801 LINC01546A6NGU7 62 aa11.64□□□□□ -0.55
ATP2C1-224ENST00000533801 C9orf118A6NHY6 69 aa11.64□□□□□ -0.55
ATP2C1-224ENST00000533801 I3L3M4 83 aa11.64□□□□□ -0.55
ATP2C1-224ENST00000533801 NPC2P61916 151 aa11.64□□□□□ -0.55
ATP2C1-224ENST00000533801 DGAT2L7PQ6IED9 249 aa11.64□□□□□ -0.55
ATP2C1-224ENST00000533801 CEND1Q8N111 149 aa11.64□□□□□ -0.55
ATP2C1-224ENST00000533801 ZNF418Q8TF45 676 aaPredicted RBP11.64□□□□□ -0.55
ATP2C1-224ENST00000533801 RPL24P83731 157 aaKnown RBP11.64□□□□□ -0.55
ATP2C1-224ENST00000533801 M0R2P5 195 aa11.63□□□□□ -0.55
ATP2C1-224ENST00000533801 F8P00451 2351 aa11.63□□□□□ -0.55
ATP2C1-224ENST00000533801 NXPH4O95158 308 aa11.63□□□□□ -0.55
ATP2C1-224ENST00000533801 H3BRM9 83 aa11.63□□□□□ -0.55
ATP2C1-224ENST00000533801 LGALS3P17931 250 aaKnown RBP11.63□□□□□ -0.55
ATP2C1-224ENST00000533801 GTF2H5Q6ZYL4 71 aa11.63□□□□□ -0.55
ATP2C1-224ENST00000533801 ZNRF2Q8NHG8 242 aa11.63□□□□□ -0.55
ATP2C1-224ENST00000533801 LOC107984156A0A0G2JMH3 177 aa11.62□□□□□ -0.55
ATP2C1-224ENST00000533801 ARL17AQ8IVW1 177 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms