RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 TIMM17AQ99595 171 aa13.34□□□□□ -0.27
PHRF1-205ENST00000533464 TANC2Q9HCD6 1990 aa13.34□□□□□ -0.27
PHRF1-205ENST00000533464 MBD6Q96DN6 1003 aa13.34□□□□□ -0.27
PHRF1-205ENST00000533464 NTN5Q8WTR8 489 aaPredicted RBP13.34□□□□□ -0.27
PHRF1-205ENST00000533464 MRAPQ8TCY5 172 aa13.33□□□□□ -0.28
PHRF1-205ENST00000533464 ANKRD11Q6UB99 2663 aaPredicted RBP13.33□□□□□ -0.28
PHRF1-205ENST00000533464 A4D1N5 150 aa13.33□□□□□ -0.28
PHRF1-205ENST00000533464 PRSS47A8MTI9 375 aa13.33□□□□□ -0.28
PHRF1-205ENST00000533464 PTPRSQ13332 1948 aa13.33□□□□□ -0.28
PHRF1-205ENST00000533464 IGLV10-54A0A075B6I4 117 aa13.33□□□□□ -0.28
PHRF1-205ENST00000533464 ATP5G1P05496 136 aa13.33□□□□□ -0.28
PHRF1-205ENST00000533464 MYCNOSP40205 109 aa13.33□□□□□ -0.28
PHRF1-205ENST00000533464 HERV-K104P63124 156 aa13.33□□□□□ -0.28
PHRF1-205ENST00000533464 C11orf86A6NJI1 115 aa13.32□□□□□ -0.28
PHRF1-205ENST00000533464 MUSTN1Q8IVN3 82 aa13.32□□□□□ -0.28
PHRF1-205ENST00000533464 EDA2RQ9HAV5 297 aa13.32□□□□□ -0.28
PHRF1-205ENST00000533464 SPART-AS1P0CW21 52 aa13.32□□□□□ -0.28
PHRF1-205ENST00000533464 IGKV2D-24A0A075B6R9 120 aa13.32□□□□□ -0.28
PHRF1-205ENST00000533464 CRLF1O75462 422 aa13.32□□□□□ -0.28
PHRF1-205ENST00000533464 IGLC6P0CF74 106 aa13.32□□□□□ -0.28
PHRF1-205ENST00000533464 DNAJC9-AS1A6NH13 148 aa13.31□□□□□ -0.28
PHRF1-205ENST00000533464 USP9XQ93008 2570 aaPredicted RBP13.31□□□□□ -0.28
PHRF1-205ENST00000533464 GAGE12HA6NDE8 117 aa13.31□□□□□ -0.28
PHRF1-205ENST00000533464 MRPL23Q16540 153 aaKnown RBP13.31□□□□□ -0.28
PHRF1-205ENST00000533464 ARHGAP32A7KAX9 2087 aa13.31□□□□□ -0.28
PHRF1-205ENST00000533464 E9PLD3 99 aa13.31□□□□□ -0.28
PHRF1-205ENST00000533464 CLPSL1A2RUU4 121 aa13.3□□□□□ -0.28
PHRF1-205ENST00000533464 IFITM1P13164 125 aa13.3□□□□□ -0.28
PHRF1-205ENST00000533464 HIGD1BQ9P298 99 aa13.3□□□□□ -0.28
PHRF1-205ENST00000533464 ZFAND3Q9H8U3 227 aa13.3□□□□□ -0.28
PHRF1-205ENST00000533464 MAP6D1Q9H9H5 199 aa13.3□□□□□ -0.28
PHRF1-205ENST00000533464 HCFC1P51610 2035 aa13.29□□□□□ -0.28
PHRF1-205ENST00000533464 C20orf203Q8NBC4 194 aa13.29□□□□□ -0.28
PHRF1-205ENST00000533464 RMI2Q96E14 147 aa13.29□□□□□ -0.28
PHRF1-205ENST00000533464 Q9HAA7 133 aa13.29□□□□□ -0.28
PHRF1-205ENST00000533464 TRAV4A0A0B4J268 109 aa13.29□□□□□ -0.28
PHRF1-205ENST00000533464 OPRPNQ99935 248 aaPredicted RBP13.29□□□□□ -0.28
PHRF1-205ENST00000533464 TP53TG3Q9ULZ0 132 aa13.29□□□□□ -0.28
PHRF1-205ENST00000533464 HHLA3Q9XRX5 114 aa13.29□□□□□ -0.28
PHRF1-205ENST00000533464 SH2D6Q7Z4S9 175 aa13.28□□□□□ -0.28
PHRF1-205ENST00000533464 DEFB135Q30KP9 77 aa13.28□□□□□ -0.28
PHRF1-205ENST00000533464 SPATA12Q7Z6I5 190 aa13.28□□□□□ -0.28
PHRF1-205ENST00000533464 IGHV4-31P0DP07 118 aa13.28□□□□□ -0.28
PHRF1-205ENST00000533464 CRIP1P50238 77 aa13.28□□□□□ -0.28
PHRF1-205ENST00000533464 DAND5Q8N907 189 aa13.28□□□□□ -0.28
PHRF1-205ENST00000533464 DEFB4AO15263 64 aa13.27□□□□□ -0.28
PHRF1-205ENST00000533464 Q6YL49 198 aa13.27□□□□□ -0.28
PHRF1-205ENST00000533464 YPEL4Q96NS1 127 aa13.27□□□□□ -0.28
PHRF1-205ENST00000533464 UBL5Q9BZL1 73 aa13.27□□□□□ -0.28
PHRF1-205ENST00000533464 C20orf173Q96LM9 149 aa13.27□□□□□ -0.29
PHRF1-205ENST00000533464 TMEM126AQ9H061 195 aa13.27□□□□□ -0.29
PHRF1-205ENST00000533464 ZMAT4Q9H898 229 aa13.27□□□□□ -0.29
PHRF1-205ENST00000533464 TINCRA0A1B0GVN0 87 aa13.27□□□□□ -0.29
PHRF1-205ENST00000533464 K7EQG2 157 aa13.27□□□□□ -0.29
PHRF1-205ENST00000533464 HAMPP81172 84 aa13.26□□□□□ -0.29
PHRF1-205ENST00000533464 WFDC11Q8NEX6 87 aa13.26□□□□□ -0.29
PHRF1-205ENST00000533464 C1orf43Q9BWL3 253 aa13.26□□□□□ -0.29
PHRF1-205ENST00000533464 ICOSQ9Y6W8 199 aa13.26□□□□□ -0.29
PHRF1-205ENST00000533464 TAX1BP3O14907 124 aa13.26□□□□□ -0.29
PHRF1-205ENST00000533464 SND1-IT1Q9HBX3 110 aa13.26□□□□□ -0.29
PHRF1-205ENST00000533464 SMAD5-AS1Q9Y6J3 95 aa13.26□□□□□ -0.29
PHRF1-205ENST00000533464 USP9YO00507 2555 aaPredicted RBP13.26□□□□□ -0.29
PHRF1-205ENST00000533464 JMJD1CQ15652 2540 aa13.26□□□□□ -0.29
PHRF1-205ENST00000533464 TEX48A0A1B0GUV7 120 aa13.25□□□□□ -0.29
PHRF1-205ENST00000533464 TMEM263Q8WUH6 116 aaKnown RBP13.25□□□□□ -0.29
PHRF1-205ENST00000533464 COX7A2LO14548 114 aa13.25□□□□□ -0.29
PHRF1-205ENST00000533464 HIST2H2BCQ6DN03 193 aa13.25□□□□□ -0.29
PHRF1-205ENST00000533464 VSIG2Q96IQ7 327 aa13.25□□□□□ -0.29
PHRF1-205ENST00000533464 BAALC-AS2P0C853 105 aa13.25□□□□□ -0.29
PHRF1-205ENST00000533464 CEMP1Q6PRD7 247 aaPredicted RBP13.25□□□□□ -0.29
PHRF1-205ENST00000533464 SETD2Q9BYW2 2564 aaPredicted RBP13.25□□□□□ -0.29
PHRF1-205ENST00000533464 CDSNQ15517 529 aa13.25□□□□□ -0.29
PHRF1-205ENST00000533464 LRRC75A-AS1Q8N1F1 130 aa13.25□□□□□ -0.29
PHRF1-205ENST00000533464 LRP4O75096 1905 aa13.24□□□□□ -0.29
PHRF1-205ENST00000533464 C10orf99Q6UWK7 81 aa13.24□□□□□ -0.29
PHRF1-205ENST00000533464 COX7B2Q8TF08 81 aa13.24□□□□□ -0.29
PHRF1-205ENST00000533464 CDK2AP2O75956 126 aa13.24□□□□□ -0.29
PHRF1-205ENST00000533464 IGHV3-30P01768 117 aa13.24□□□□□ -0.29
PHRF1-205ENST00000533464 IGHV3-33P01772 117 aa13.24□□□□□ -0.29
PHRF1-205ENST00000533464 P0DMU3 169 aa13.24□□□□□ -0.29
PHRF1-205ENST00000533464 FAM231AP0DMU4 169 aa13.24□□□□□ -0.29
PHRF1-205ENST00000533464 FAM231CP0DMU5 169 aa13.24□□□□□ -0.29
PHRF1-205ENST00000533464 IGHV3-30-3P0DP02 117 aa13.24□□□□□ -0.29
PHRF1-205ENST00000533464 IGHV3-30-5P0DP03 117 aa13.24□□□□□ -0.29
PHRF1-205ENST00000533464 DSCR8Q96T75 97 aa13.23□□□□□ -0.29
PHRF1-205ENST00000533464 LGALS9O00182 355 aa13.23□□□□□ -0.29
PHRF1-205ENST00000533464 Q8N6K4 173 aa13.22□□□□□ -0.29
PHRF1-205ENST00000533464 ABCA12Q86UK0 2595 aa13.22□□□□□ -0.29
PHRF1-205ENST00000533464 RPL32P62910 135 aaKnown RBP13.22□□□□□ -0.29
PHRF1-205ENST00000533464 ANKRD29Q8N6D5 301 aa13.22□□□□□ -0.29
PHRF1-205ENST00000533464 ODF3Q96PU9 254 aa13.22□□□□□ -0.29
PHRF1-205ENST00000533464 PRRC2AP48634 2157 aaKnown RBP13.21□□□□□ -0.29
PHRF1-205ENST00000533464 IGLV2-11P01706 119 aa13.21□□□□□ -0.29
PHRF1-205ENST00000533464 ZFAND2AQ8N6M9 145 aa13.21□□□□□ -0.29
PHRF1-205ENST00000533464 CAMK2N2Q96S95 79 aa13.21□□□□□ -0.29
PHRF1-205ENST00000533464 TRBV10-1A0A0K0K1A3 114 aa13.21□□□□□ -0.3
PHRF1-205ENST00000533464 DEFB114Q30KQ6 69 aa13.2□□□□□ -0.3
PHRF1-205ENST00000533464 WFDC2Q14508 124 aa13.2□□□□□ -0.3
PHRF1-205ENST00000533464 Q6ZTI0 123 aa13.2□□□□□ -0.3
PHRF1-205ENST00000533464 ZFYVE26Q68DK2 2539 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms