RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 SNAI2O43623 268 aa11.66□□□□□ -0.54
PCF11-206ENST00000533018 EIF5AP63241 154 aaKnown RBP11.66□□□□□ -0.54
PCF11-206ENST00000533018 MPV17L2Q567V2 206 aa11.66□□□□□ -0.54
PCF11-206ENST00000533018 TPPP3Q9BW30 176 aa11.66□□□□□ -0.54
PCF11-206ENST00000533018 HMSDA8MTL9 139 aa11.65□□□□□ -0.54
PCF11-206ENST00000533018 OR5AL1P0C617 328 aa11.65□□□□□ -0.54
PCF11-206ENST00000533018 RPL35P42766 123 aaKnown RBP11.65□□□□□ -0.54
PCF11-206ENST00000533018 C14orf177Q52M58 125 aa11.65□□□□□ -0.54
PCF11-206ENST00000533018 ATRAIDQ6UW56 229 aa11.65□□□□□ -0.54
PCF11-206ENST00000533018 ENHOQ6UWT2 76 aa11.65□□□□□ -0.54
PCF11-206ENST00000533018 SSBP4Q9BWG4 385 aaPredicted RBP11.65□□□□□ -0.54
PCF11-206ENST00000533018 HLA-DQA1P01909 254 aa11.64□□□□□ -0.55
PCF11-206ENST00000533018 PKIAP61925 76 aa11.64□□□□□ -0.55
PCF11-206ENST00000533018 DEFB104AQ8WTQ1 72 aa11.64□□□□□ -0.55
PCF11-206ENST00000533018 DERL1Q9BUN8 251 aa11.64□□□□□ -0.55
PCF11-206ENST00000533018 CHAC1Q9BUX1 264 aa11.64□□□□□ -0.55
PCF11-206ENST00000533018 GNG13Q9P2W3 67 aa11.64□□□□□ -0.55
PCF11-206ENST00000533018 TMEM97Q5BJF2 176 aa11.63□□□□□ -0.55
PCF11-206ENST00000533018 DAZAP1Q96EP5 407 aaKnown RBP11.63□□□□□ -0.55
PCF11-206ENST00000533018 AP1S3Q96PC3 154 aa11.63□□□□□ -0.55
PCF11-206ENST00000533018 MGPP08493 103 aa11.62□□□□□ -0.55
PCF11-206ENST00000533018 MANBALQ9NQG1 85 aa11.62□□□□□ -0.55
PCF11-206ENST00000533018 TRBV25-1A0A075B6N4 114 aa11.61□□□□□ -0.55
PCF11-206ENST00000533018 GZMBP10144 247 aa11.61□□□□□ -0.55
PCF11-206ENST00000533018 CCL20P78556 96 aa11.61□□□□□ -0.55
PCF11-206ENST00000533018 GAGE6Q13070 117 aa11.61□□□□□ -0.55
PCF11-206ENST00000533018 CLPSL2Q6UWE3 100 aa11.61□□□□□ -0.55
PCF11-206ENST00000533018 CIRBP-AS1Q8TBR5 109 aa11.61□□□□□ -0.55
PCF11-206ENST00000533018 USP17L23D6RBM5 183 aa11.6□□□□□ -0.55
PCF11-206ENST00000533018 MIAQ16674 131 aa11.6□□□□□ -0.55
PCF11-206ENST00000533018 CENPWQ5EE01 88 aa11.6□□□□□ -0.55
PCF11-206ENST00000533018 NTM-AS1Q6ZSK4 140 aa11.6□□□□□ -0.55
PCF11-206ENST00000533018 KIF25-AS1Q9Y6Z4 181 aa11.6□□□□□ -0.55
PCF11-206ENST00000533018 TEX46H3BTG2 121 aa11.59□□□□□ -0.55
PCF11-206ENST00000533018 LINC00269Q8N2A0 174 aa11.59□□□□□ -0.55
PCF11-206ENST00000533018 FER1L6-AS1Q8NA97 138 aa11.59□□□□□ -0.55
PCF11-206ENST00000533018 OR2D3Q8NGH3 330 aa11.59□□□□□ -0.55
PCF11-206ENST00000533018 VAX2Q9UIW0 290 aa11.59□□□□□ -0.55
PCF11-206ENST00000533018 RPS20P60866 119 aaKnown RBP11.58□□□□□ -0.56
PCF11-206ENST00000533018 RBX1P62877 108 aa11.58□□□□□ -0.56
PCF11-206ENST00000533018 LRP1Q07954 4544 aaKnown RBP11.57□□□□□ -0.56
PCF11-206ENST00000533018 RAB19A4D1S5 217 aa11.57□□□□□ -0.56
PCF11-206ENST00000533018 KRTAP29-1A8MX34 341 aaPredicted RBP11.57□□□□□ -0.56
PCF11-206ENST00000533018 H7C1H1 209 aa11.57□□□□□ -0.56
PCF11-206ENST00000533018 GNG4P50150 75 aa11.57□□□□□ -0.56
PCF11-206ENST00000533018 C11orf52Q96A22 123 aa11.57□□□□□ -0.56
PCF11-206ENST00000533018 IGHV1-24A0A0C4DH33 117 aa11.56□□□□□ -0.56
PCF11-206ENST00000533018 XKRY2A2RUG3 117 aa11.56□□□□□ -0.56
PCF11-206ENST00000533018 RAB5CP51148 216 aa11.56□□□□□ -0.56
PCF11-206ENST00000533018 CACNG7P62955 275 aa11.56□□□□□ -0.56
PCF11-206ENST00000533018 SUMO4Q6EEV6 95 aa11.56□□□□□ -0.56
PCF11-206ENST00000533018 EIF5AL1Q6IS14 154 aaKnown RBP11.56□□□□□ -0.56
PCF11-206ENST00000533018 M0QY20 66 aa11.55□□□□□ -0.56
PCF11-206ENST00000533018 IGLV2-8P01709 118 aa11.55□□□□□ -0.56
PCF11-206ENST00000533018 P01737 135 aa11.55□□□□□ -0.56
PCF11-206ENST00000533018 PRSS1P07477 247 aa11.55□□□□□ -0.56
PCF11-206ENST00000533018 IGLC6P0CF74 106 aa11.55□□□□□ -0.56
PCF11-206ENST00000533018 PRR34Q9NV39 138 aa11.55□□□□□ -0.56
PCF11-206ENST00000533018 MED9Q9NWA0 146 aa11.55□□□□□ -0.56
PCF11-206ENST00000533018 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
PCF11-206ENST00000533018 TRAV1-1A0A0B4J248 108 aa11.54□□□□□ -0.56
PCF11-206ENST00000533018 IFNA1P01562 189 aa11.54□□□□□ -0.56
PCF11-206ENST00000533018 NKX2-5P52952 324 aaPredicted RBP11.54□□□□□ -0.56
PCF11-206ENST00000533018 IQCJQ1A5X6 159 aa11.54□□□□□ -0.56
PCF11-206ENST00000533018 C19orf71A6NCJ1 209 aa11.53□□□□□ -0.56
PCF11-206ENST00000533018 F2Z2F3 143 aa11.53□□□□□ -0.56
PCF11-206ENST00000533018 PDE6DO43924 150 aa11.53□□□□□ -0.56
PCF11-206ENST00000533018 MEF2BQ02080 365 aaPredicted RBP11.53□□□□□ -0.56
PCF11-206ENST00000533018 REG3AQ06141 175 aa11.53□□□□□ -0.56
PCF11-206ENST00000533018 DGAT2L7PQ6IED9 249 aa11.53□□□□□ -0.56
PCF11-206ENST00000533018 TRGC1P0CF51 173 aa11.52□□□□□ -0.57
PCF11-206ENST00000533018 RASL11AQ6T310 242 aa11.52□□□□□ -0.57
PCF11-206ENST00000533018 LYZL1Q6UWQ5 148 aa11.52□□□□□ -0.57
PCF11-206ENST00000533018 SMIM12Q96EX1 92 aa11.52□□□□□ -0.57
PCF11-206ENST00000533018 BIN3Q9NQY0 253 aa11.52□□□□□ -0.57
PCF11-206ENST00000533018 FAT3Q8TDW7 4589 aa11.51□□□□□ -0.57
PCF11-206ENST00000533018 SULT1A2P50226 295 aa11.51□□□□□ -0.57
PCF11-206ENST00000533018 TMEM243Q9BU79 118 aa11.51□□□□□ -0.57
PCF11-206ENST00000533018 DPH3P1Q9H4G8 78 aa11.51□□□□□ -0.57
PCF11-206ENST00000533018 UBE2L6O14933 153 aa11.5□□□□□ -0.57
PCF11-206ENST00000533018 NTF3P20783 257 aa11.5□□□□□ -0.57
PCF11-206ENST00000533018 KRTAP10-4P60372 401 aaPredicted RBP11.5□□□□□ -0.57
PCF11-206ENST00000533018 RPL37AP61513 92 aaKnown RBP11.5□□□□□ -0.57
PCF11-206ENST00000533018 C9orf163Q8N9P6 203 aa11.5□□□□□ -0.57
PCF11-206ENST00000533018 CLRN3Q8NCR9 226 aa11.5□□□□□ -0.57
PCF11-206ENST00000533018 hDV102S1A0JD36 115 aa11.49□□□□□ -0.57
PCF11-206ENST00000533018 TWIST1Q15672 202 aa11.49□□□□□ -0.57
PCF11-206ENST00000533018 KRTAP26-1Q6PEX3 210 aa11.49□□□□□ -0.57
PCF11-206ENST00000533018 C20orf203Q8NBC4 194 aa11.49□□□□□ -0.57
PCF11-206ENST00000533018 NIT2Q9NQR4 276 aa11.49□□□□□ -0.57
PCF11-206ENST00000533018 TRBV20OR9-2A0A075B6H5 130 aa11.48□□□□□ -0.57
PCF11-206ENST00000533018 TRAV8-4A0A0B4J246 113 aa11.48□□□□□ -0.57
PCF11-206ENST00000533018 BCL2P10415 239 aa11.48□□□□□ -0.57
PCF11-206ENST00000533018 NUDT10Q8NFP7 164 aa11.48□□□□□ -0.57
PCF11-206ENST00000533018 NUDT11Q96G61 164 aa11.48□□□□□ -0.57
PCF11-206ENST00000533018 IGLV4-60A0A075B6I1 120 aa11.47□□□□□ -0.57
PCF11-206ENST00000533018 AMTP48728 403 aa11.47□□□□□ -0.57
PCF11-206ENST00000533018 COTL1Q14019 142 aa11.47□□□□□ -0.57
PCF11-206ENST00000533018 C9orf62Q8N4C0 152 aa11.47□□□□□ -0.57
PCF11-206ENST00000533018 DPH3Q96FX2 82 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms