RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 LINC01551Q86U37 167 aa11.88□□□□□ -0.51
SMG1-203ENST00000532700 PGPEP1Q9NXJ5 209 aa11.88□□□□□ -0.51
SMG1-203ENST00000532700 MUC21A0A0G2JKD1 596 aa11.87□□□□□ -0.51
SMG1-203ENST00000532700 MUC21A0A140T8X8 626 aa11.87□□□□□ -0.51
SMG1-203ENST00000532700 C9JQL5 133 aa11.87□□□□□ -0.51
SMG1-203ENST00000532700 CLLU1Q5K131 121 aa11.87□□□□□ -0.51
SMG1-203ENST00000532700 C10orf126Q8N4M7 172 aa11.87□□□□□ -0.51
SMG1-203ENST00000532700 SMIM17P0DL12 118 aa11.86□□□□□ -0.51
SMG1-203ENST00000532700 SSTP61278 116 aa11.86□□□□□ -0.51
SMG1-203ENST00000532700 DAZ4Q86SG3 579 aaKnown RBP11.86□□□□□ -0.51
SMG1-203ENST00000532700 DAZ3Q9NR90 486 aaKnown RBP11.86□□□□□ -0.51
SMG1-203ENST00000532700 A8MWL6 223 aa11.85□□□□□ -0.51
SMG1-203ENST00000532700 EREGO14944 169 aa11.85□□□□□ -0.51
SMG1-203ENST00000532700 CT83Q5H943 113 aa11.85□□□□□ -0.51
SMG1-203ENST00000532700 CDPF1Q6NVV7 123 aa11.85□□□□□ -0.51
SMG1-203ENST00000532700 WDR73Q6P4I2 378 aa11.85□□□□□ -0.51
SMG1-203ENST00000532700 LYZL1Q6UWQ5 148 aa11.85□□□□□ -0.51
SMG1-203ENST00000532700 AP1S3Q96PC3 154 aa11.85□□□□□ -0.51
SMG1-203ENST00000532700 NAT8Q9UHE5 227 aa11.85□□□□□ -0.51
SMG1-203ENST00000532700 RAB4BP61018 213 aa11.84□□□□□ -0.51
SMG1-203ENST00000532700 IFITM2Q01629 132 aa11.84□□□□□ -0.51
SMG1-203ENST00000532700 C15orf54Q8N8G6 183 aa11.84□□□□□ -0.51
SMG1-203ENST00000532700 OSTCQ9NRP0 149 aa11.84□□□□□ -0.51
SMG1-203ENST00000532700 CTRLP40313 264 aa11.83□□□□□ -0.52
SMG1-203ENST00000532700 TRGC1P0CF51 173 aa11.82□□□□□ -0.52
SMG1-203ENST00000532700 RPL23P62829 140 aaKnown RBP11.82□□□□□ -0.52
SMG1-203ENST00000532700 ADIRFQ15847 76 aa11.82□□□□□ -0.52
SMG1-203ENST00000532700 ZNF56Q15929 161 aa11.82□□□□□ -0.52
SMG1-203ENST00000532700 TRBV10-1A0A0K0K1A3 114 aa11.81□□□□□ -0.52
SMG1-203ENST00000532700 F5H697 171 aa11.81□□□□□ -0.52
SMG1-203ENST00000532700 LECT2O14960 151 aa11.81□□□□□ -0.52
SMG1-203ENST00000532700 PSCAO43653 123 aa11.81□□□□□ -0.52
SMG1-203ENST00000532700 NTF3P20783 257 aa11.81□□□□□ -0.52
SMG1-203ENST00000532700 Q8N814 137 aa11.81□□□□□ -0.52
SMG1-203ENST00000532700 ISOC2Q96AB3 205 aa11.81□□□□□ -0.52
SMG1-203ENST00000532700 CNFNQ9BYD5 112 aa11.81□□□□□ -0.52
SMG1-203ENST00000532700 FAT1Q14517 4588 aa11.81□□□□□ -0.52
SMG1-203ENST00000532700 FAM231BA6NCW3 169 aa11.8□□□□□ -0.52
SMG1-203ENST00000532700 GCSHP23434 173 aa11.8□□□□□ -0.52
SMG1-203ENST00000532700 FOXA3P55318 350 aaPredicted RBP11.8□□□□□ -0.52
SMG1-203ENST00000532700 TWIST1Q15672 202 aa11.8□□□□□ -0.52
SMG1-203ENST00000532700 TSKUQ8WUA8 353 aa11.8□□□□□ -0.52
SMG1-203ENST00000532700 GTSF1Q8WW33 167 aa11.8□□□□□ -0.52
SMG1-203ENST00000532700 BORCS7Q96B45 105 aa11.8□□□□□ -0.52
SMG1-203ENST00000532700 GFRA4Q9GZZ7 299 aa11.8□□□□□ -0.52
SMG1-203ENST00000532700 UBE2D3P61077 147 aa11.79□□□□□ -0.52
SMG1-203ENST00000532700 UBE2D2P62837 147 aa11.79□□□□□ -0.52
SMG1-203ENST00000532700 RPL36AP83881 106 aaKnown RBP11.79□□□□□ -0.52
SMG1-203ENST00000532700 LAGE3Q14657 143 aa11.79□□□□□ -0.52
SMG1-203ENST00000532700 NIT1Q86X76 327 aa11.79□□□□□ -0.52
SMG1-203ENST00000532700 OR10G8Q8NGN5 311 aa11.79□□□□□ -0.52
SMG1-203ENST00000532700 RPL36ALQ969Q0 106 aaKnown RBP11.79□□□□□ -0.52
SMG1-203ENST00000532700 FAM30AQ9NZY2 134 aa11.79□□□□□ -0.52
SMG1-203ENST00000532700 KIF25-AS1Q9Y6Z4 181 aa11.79□□□□□ -0.52
SMG1-203ENST00000532700 IGLV5-52A0A0A0MRZ9 124 aa11.78□□□□□ -0.52
SMG1-203ENST00000532700 SMR3BP02814 79 aaPredicted RBP11.78□□□□□ -0.52
SMG1-203ENST00000532700 SMIM15Q7Z3B0 74 aa11.78□□□□□ -0.52
SMG1-203ENST00000532700 NEXN-AS1Q8NBZ9 246 aa11.78□□□□□ -0.52
SMG1-203ENST00000532700 PGLYRP4Q96LB8 373 aa11.78□□□□□ -0.52
SMG1-203ENST00000532700 MGPP08493 103 aa11.77□□□□□ -0.53
SMG1-203ENST00000532700 DPH3P1Q9H4G8 78 aa11.77□□□□□ -0.53
SMG1-203ENST00000532700 V9GYV3 84 aa11.77□□□□□ -0.53
SMG1-203ENST00000532700 DNAH8Q96JB1 4490 aa11.77□□□□□ -0.53
SMG1-203ENST00000532700 TRBV7-3A0A075B6L6 115 aa11.76□□□□□ -0.53
SMG1-203ENST00000532700 HIGD1CA8MV81 97 aa11.76□□□□□ -0.53
SMG1-203ENST00000532700 H7C1H1 209 aa11.76□□□□□ -0.53
SMG1-203ENST00000532700 UQCC3Q6UW78 93 aa11.76□□□□□ -0.53
SMG1-203ENST00000532700 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.76□□□□□ -0.53
SMG1-203ENST00000532700 A0A087WWC5 75 aa11.75□□□□□ -0.53
SMG1-203ENST00000532700 LINC01620Q4KN68 170 aa11.75□□□□□ -0.53
SMG1-203ENST00000532700 Q5VSD8 79 aa11.75□□□□□ -0.53
SMG1-203ENST00000532700 KLK12Q9UKR0 248 aa11.75□□□□□ -0.53
SMG1-203ENST00000532700 A0A1B0GUT8 65 aa11.74□□□□□ -0.53
SMG1-203ENST00000532700 EPM2AB3EWF7 344 aa11.74□□□□□ -0.53
SMG1-203ENST00000532700 PNRC1Q12796 327 aaPredicted RBP11.74□□□□□ -0.53
SMG1-203ENST00000532700 BAALCQ8WXS3 180 aa11.74□□□□□ -0.53
SMG1-203ENST00000532700 NAT8BQ9UHF3 227 aa11.74□□□□□ -0.53
SMG1-203ENST00000532700 VPS13BQ7Z7G8 4022 aa11.74□□□□□ -0.53
SMG1-203ENST00000532700 NTM-AS1Q6ZSK4 140 aa11.73□□□□□ -0.53
SMG1-203ENST00000532700 NTN5Q8WTR8 489 aaPredicted RBP11.73□□□□□ -0.53
SMG1-203ENST00000532700 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.72□□□□□ -0.53
SMG1-203ENST00000532700 M0QY20 66 aa11.72□□□□□ -0.53
SMG1-203ENST00000532700 SUMO4Q6EEV6 95 aa11.72□□□□□ -0.53
SMG1-203ENST00000532700 TRAV8-3A0A0A6YYJ7 113 aa11.71□□□□□ -0.53
SMG1-203ENST00000532700 SMIM27A0A1W2PRY6 76 aa11.71□□□□□ -0.53
SMG1-203ENST00000532700 PPP1R2P9O14990 202 aa11.71□□□□□ -0.53
SMG1-203ENST00000532700 RIGQ13278 110 aa11.71□□□□□ -0.53
SMG1-203ENST00000532700 MPV17L2Q567V2 206 aa11.71□□□□□ -0.53
SMG1-203ENST00000532700 NUP35Q8NFH5 326 aa11.71□□□□□ -0.53
SMG1-203ENST00000532700 TRBV6-8A0A0A6YYG3 113 aa11.7□□□□□ -0.54
SMG1-203ENST00000532700 RASL11AQ6T310 242 aa11.7□□□□□ -0.54
SMG1-203ENST00000532700 COMMD7Q86VX2 200 aa11.7□□□□□ -0.54
SMG1-203ENST00000532700 UBE2WQ96B02 151 aa11.7□□□□□ -0.54
SMG1-203ENST00000532700 TM2D2Q9BX73 214 aa11.7□□□□□ -0.54
SMG1-203ENST00000532700 IGKV2D-24A0A075B6R9 120 aa11.69□□□□□ -0.54
SMG1-203ENST00000532700 TMEM218A2RU14 115 aa11.69□□□□□ -0.54
SMG1-203ENST00000532700 TMEM97Q5BJF2 176 aa11.69□□□□□ -0.54
SMG1-203ENST00000532700 ENHOQ6UWT2 76 aa11.69□□□□□ -0.54
SMG1-203ENST00000532700 FRZBQ92765 325 aa11.69□□□□□ -0.54
SMG1-203ENST00000532700 TMEM70Q9BUB7 260 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms