RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 FAM231AP0DMU4 169 aa15.59■□□□□ 0.09
PACSIN3-209ENST00000532457 FAM231CP0DMU5 169 aa15.59■□□□□ 0.09
PACSIN3-209ENST00000532457 DEFB130BP0DP73 79 aa15.59■□□□□ 0.09
PACSIN3-209ENST00000532457 DEFB130AP0DP74 79 aa15.59■□□□□ 0.09
PACSIN3-209ENST00000532457 FABP4P15090 132 aa15.59■□□□□ 0.09
PACSIN3-209ENST00000532457 TRAV4A0A0B4J268 109 aa15.58■□□□□ 0.08
PACSIN3-209ENST00000532457 DKK2Q9UBU2 259 aa15.58■□□□□ 0.08
PACSIN3-209ENST00000532457 CELA1Q9UNI1 258 aa15.58■□□□□ 0.08
PACSIN3-209ENST00000532457 LAMTOR2Q9Y2Q5 125 aa15.58■□□□□ 0.08
PACSIN3-209ENST00000532457 TRGV2A0A075B6R0 118 aa15.57■□□□□ 0.08
PACSIN3-209ENST00000532457 ZFP2Q6ZN57 461 aa15.57■□□□□ 0.08
PACSIN3-209ENST00000532457 OR10D4PQ8NGN7 298 aa15.57■□□□□ 0.08
PACSIN3-209ENST00000532457 HUWE1Q7Z6Z7 4374 aaKnown RBP15.57■□□□□ 0.08
PACSIN3-209ENST00000532457 IGLV2-18A0A075B6J9 118 aa15.57■□□□□ 0.08
PACSIN3-209ENST00000532457 PRSS47A8MTI9 375 aa15.57■□□□□ 0.08
PACSIN3-209ENST00000532457 LINC00614P0C842 121 aa15.57■□□□□ 0.08
PACSIN3-209ENST00000532457 ESDP10768 282 aa15.57■□□□□ 0.08
PACSIN3-209ENST00000532457 RNASEKQ6P5S7 137 aaKnown RBP15.56■□□□□ 0.08
PACSIN3-209ENST00000532457 PRSS3P2Q8NHM4 247 aa15.56■□□□□ 0.08
PACSIN3-209ENST00000532457 PACRGQ96M98 296 aaPredicted RBP15.55■□□□□ 0.08
PACSIN3-209ENST00000532457 MAP1LC3AQ9H492 121 aa15.55■□□□□ 0.08
PACSIN3-209ENST00000532457 TGP01266 2768 aa15.55■□□□□ 0.08
PACSIN3-209ENST00000532457 RHODO00212 210 aa15.54■□□□□ 0.08
PACSIN3-209ENST00000532457 LYRM9A8MSI8 78 aa15.54■□□□□ 0.08
PACSIN3-209ENST00000532457 FAM19A2Q8N3H0 131 aa15.54■□□□□ 0.08
PACSIN3-209ENST00000532457 TMEM18Q96B42 140 aa15.54■□□□□ 0.08
PACSIN3-209ENST00000532457 SUMO2P61956 95 aaKnown RBP15.53■□□□□ 0.08
PACSIN3-209ENST00000532457 PMCHL1Q16048 86 aa15.53■□□□□ 0.08
PACSIN3-209ENST00000532457 EDA2RQ9HAV5 297 aa15.53■□□□□ 0.08
PACSIN3-209ENST00000532457 FHL2Q14192 279 aa15.52■□□□□ 0.08
PACSIN3-209ENST00000532457 NEGR1Q7Z3B1 354 aa15.52■□□□□ 0.08
PACSIN3-209ENST00000532457 C20orf78Q9BR46 151 aa15.52■□□□□ 0.08
PACSIN3-209ENST00000532457 NIT2Q9NQR4 276 aa15.52■□□□□ 0.08
PACSIN3-209ENST00000532457 POLR2KP53803 58 aaKnown RBP15.52■□□□□ 0.07
PACSIN3-209ENST00000532457 C18orf15Q96N68 181 aa15.52■□□□□ 0.07
PACSIN3-209ENST00000532457 TRBV6-5A0A0K0K1A5 114 aa15.51■□□□□ 0.07
PACSIN3-209ENST00000532457 Q8N8P6 123 aa15.51■□□□□ 0.07
PACSIN3-209ENST00000532457 DEFB104AQ8WTQ1 72 aa15.51■□□□□ 0.07
PACSIN3-209ENST00000532457 CHCHD1Q96BP2 118 aaKnown RBP15.51■□□□□ 0.07
PACSIN3-209ENST00000532457 PYY3Q5JQD4 70 aa15.5■□□□□ 0.07
PACSIN3-209ENST00000532457 FA2HQ7L5A8 372 aa15.5■□□□□ 0.07
PACSIN3-209ENST00000532457 SLC25A29Q8N8R3 303 aa15.5■□□□□ 0.07
PACSIN3-209ENST00000532457 SMIM2Q9BVW6 85 aa15.5■□□□□ 0.07
PACSIN3-209ENST00000532457 ST20Q9HBF5 79 aa15.5■□□□□ 0.07
PACSIN3-209ENST00000532457 LINC01546A6NGU7 62 aa15.5■□□□□ 0.07
PACSIN3-209ENST00000532457 PPP1R17O96001 155 aa15.5■□□□□ 0.07
PACSIN3-209ENST00000532457 NEXN-AS1Q8NBZ9 246 aa15.5■□□□□ 0.07
PACSIN3-209ENST00000532457 TMEM70Q9BUB7 260 aa15.5■□□□□ 0.07
PACSIN3-209ENST00000532457 TCAPO15273 167 aa15.49■□□□□ 0.07
PACSIN3-209ENST00000532457 PMCHP20382 165 aa15.49■□□□□ 0.07
PACSIN3-209ENST00000532457 SDHAF1A6NFY7 115 aa15.48■□□□□ 0.07
PACSIN3-209ENST00000532457 SPART-AS1P0CW21 52 aa15.48■□□□□ 0.07
PACSIN3-209ENST00000532457 NXT2Q9NPJ8 142 aaKnown RBP15.48■□□□□ 0.07
PACSIN3-209ENST00000532457 AP5S1Q9NUS5 200 aa15.48■□□□□ 0.07
PACSIN3-209ENST00000532457 H7C1H1 209 aa15.47■□□□□ 0.07
PACSIN3-209ENST00000532457 HSBP1O75506 76 aa15.47■□□□□ 0.07
PACSIN3-209ENST00000532457 A0A096LNJ9 63 aa15.47■□□□□ 0.07
PACSIN3-209ENST00000532457 IGHV1-24A0A0C4DH33 117 aa15.47■□□□□ 0.07
PACSIN3-209ENST00000532457 TRGV4A0A0C4DH28 118 aa15.46■□□□□ 0.07
PACSIN3-209ENST00000532457 AMTP48728 403 aa15.46■□□□□ 0.07
PACSIN3-209ENST00000532457 DAD1P61803 113 aa15.46■□□□□ 0.07
PACSIN3-209ENST00000532457 A0A0J9YWU9 116 aa15.45■□□□□ 0.06
PACSIN3-209ENST00000532457 LOC100131303A0A0U1RQF7 123 aa15.45■□□□□ 0.06
PACSIN3-209ENST00000532457 CIDEAO60543 219 aa15.45■□□□□ 0.06
PACSIN3-209ENST00000532457 RPL32P62910 135 aaKnown RBP15.45■□□□□ 0.06
PACSIN3-209ENST00000532457 C11orf68Q9H3H3 251 aaKnown RBP15.45■□□□□ 0.06
PACSIN3-209ENST00000532457 TRBV27A0A0K0K1C4 114 aa15.45■□□□□ 0.06
PACSIN3-209ENST00000532457 K7EQD1 137 aa15.45■□□□□ 0.06
PACSIN3-209ENST00000532457 C12orf74Q32Q52 190 aa15.45■□□□□ 0.06
PACSIN3-209ENST00000532457 VCYO14598 125 aa15.44■□□□□ 0.06
PACSIN3-209ENST00000532457 TNFRSF18Q9Y5U5 241 aa15.44■□□□□ 0.06
PACSIN3-209ENST00000532457 STAB2Q8WWQ8 2551 aa15.44■□□□□ 0.06
PACSIN3-209ENST00000532457 JOSD1Q15040 202 aaPredicted RBP15.43■□□□□ 0.06
PACSIN3-209ENST00000532457 HHLA3Q9XRX5 114 aa15.43■□□□□ 0.06
PACSIN3-209ENST00000532457 TRBV6-4A0A1B0GX49 114 aa15.43■□□□□ 0.06
PACSIN3-209ENST00000532457 LINC00173Q6ZV60 143 aa15.43■□□□□ 0.06
PACSIN3-209ENST00000532457 ZNRF2Q8NHG8 242 aa15.43■□□□□ 0.06
PACSIN3-209ENST00000532457 DNAJC30Q96LL9 226 aa15.42■□□□□ 0.06
PACSIN3-209ENST00000532457 LAGE3Q14657 143 aa15.41■□□□□ 0.06
PACSIN3-209ENST00000532457 TRBV7-3A0A075B6L6 115 aa15.4■□□□□ 0.06
PACSIN3-209ENST00000532457 IGHV3-38A0A0C4DH36 116 aa15.4■□□□□ 0.06
PACSIN3-209ENST00000532457 TRBV10-1A0A0K0K1A3 114 aa15.4■□□□□ 0.06
PACSIN3-209ENST00000532457 GAGE12JA6NER3 117 aa15.4■□□□□ 0.06
PACSIN3-209ENST00000532457 TSHBP01222 138 aa15.4■□□□□ 0.06
PACSIN3-209ENST00000532457 CRYBA4P53673 196 aa15.4■□□□□ 0.06
PACSIN3-209ENST00000532457 GAGE1Q13065 139 aa15.4■□□□□ 0.06
PACSIN3-209ENST00000532457 GAGE4Q13068 117 aa15.4■□□□□ 0.06
PACSIN3-209ENST00000532457 GAGE5Q13069 117 aa15.4■□□□□ 0.06
PACSIN3-209ENST00000532457 GAGE13Q4V321 117 aa15.4■□□□□ 0.06
PACSIN3-209ENST00000532457 PHLDA1Q8WV24 401 aaPredicted RBP15.4■□□□□ 0.06
PACSIN3-209ENST00000532457 FCER1GP30273 86 aa15.39■□□□□ 0.05
PACSIN3-209ENST00000532457 I3L3M4 83 aa15.38■□□□□ 0.05
PACSIN3-209ENST00000532457 ATP5G1P05496 136 aa15.38■□□□□ 0.05
PACSIN3-209ENST00000532457 CDPF1Q6NVV7 123 aa15.38■□□□□ 0.05
PACSIN3-209ENST00000532457 TEX48A0A1B0GUV7 120 aa15.38■□□□□ 0.05
PACSIN3-209ENST00000532457 PCP4L1A6NKN8 68 aa15.38■□□□□ 0.05
PACSIN3-209ENST00000532457 VSIG2Q96IQ7 327 aa15.38■□□□□ 0.05
PACSIN3-209ENST00000532457 UBE2D3P61077 147 aa15.37■□□□□ 0.05
PACSIN3-209ENST00000532457 UBE2D2P62837 147 aa15.37■□□□□ 0.05
PACSIN3-209ENST00000532457 PRO0255Q9UI72 69 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms