RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TMEM97Q5BJF2 176 aa10.24□□□□□ -0.77
CHMP4A-204ENST00000530996 FAM213BQ8TBF2 198 aa10.24□□□□□ -0.77
CHMP4A-204ENST00000530996 HMCN2Q8NDA2 5059 aa10.23□□□□□ -0.77
CHMP4A-204ENST00000530996 TRBV25-1A0A075B6N4 114 aa10.23□□□□□ -0.77
CHMP4A-204ENST00000530996 PRSS1P07477 247 aa10.23□□□□□ -0.77
CHMP4A-204ENST00000530996 MGPP08493 103 aa10.23□□□□□ -0.77
CHMP4A-204ENST00000530996 CXCL1P09341 107 aa10.23□□□□□ -0.77
CHMP4A-204ENST00000530996 BAGE2Q86Y30 109 aa10.23□□□□□ -0.77
CHMP4A-204ENST00000530996 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
CHMP4A-204ENST00000530996 SFT2D1Q8WV19 159 aa10.23□□□□□ -0.77
CHMP4A-204ENST00000530996 DERL1Q9BUN8 251 aa10.23□□□□□ -0.77
CHMP4A-204ENST00000530996 TPPP3Q9BW30 176 aa10.23□□□□□ -0.77
CHMP4A-204ENST00000530996 S100A9P06702 114 aaKnown RBP10.22□□□□□ -0.77
CHMP4A-204ENST00000530996 RBX1P62877 108 aa10.22□□□□□ -0.77
CHMP4A-204ENST00000530996 SNAI2O43623 268 aa10.21□□□□□ -0.77
CHMP4A-204ENST00000530996 CYTL1Q9NRR1 136 aa10.21□□□□□ -0.77
CHMP4A-204ENST00000530996 IGLV10-54A0A075B6I4 117 aa10.2□□□□□ -0.78
CHMP4A-204ENST00000530996 IGHV1-24A0A0C4DH33 117 aa10.2□□□□□ -0.78
CHMP4A-204ENST00000530996 OR5AL1P0C617 328 aa10.2□□□□□ -0.78
CHMP4A-204ENST00000530996 DGAT2L7PQ6IED9 249 aa10.2□□□□□ -0.78
CHMP4A-204ENST00000530996 NTM-AS1Q6ZSK4 140 aa10.2□□□□□ -0.78
CHMP4A-204ENST00000530996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.2□□□□□ -0.78
CHMP4A-204ENST00000530996 LRP1Q07954 4544 aaKnown RBP10.19□□□□□ -0.78
CHMP4A-204ENST00000530996 HNRNPA3P51991 378 aaKnown RBP10.19□□□□□ -0.78
CHMP4A-204ENST00000530996 PRR34Q9NV39 138 aa10.19□□□□□ -0.78
CHMP4A-204ENST00000530996 VAX2Q9UIW0 290 aa10.19□□□□□ -0.78
CHMP4A-204ENST00000530996 hDV102S1A0JD36 115 aa10.18□□□□□ -0.78
CHMP4A-204ENST00000530996 G3V3Q6 166 aa10.18□□□□□ -0.78
CHMP4A-204ENST00000530996 SMLR1H3BR10 107 aa10.18□□□□□ -0.78
CHMP4A-204ENST00000530996 KCNRGQ8N5I3 272 aa10.18□□□□□ -0.78
CHMP4A-204ENST00000530996 C9orf163Q8N9P6 203 aa10.18□□□□□ -0.78
CHMP4A-204ENST00000530996 BATF3Q9NR55 127 aa10.18□□□□□ -0.78
CHMP4A-204ENST00000530996 A0A0D9SG52 128 aa10.17□□□□□ -0.78
CHMP4A-204ENST00000530996 H7C1H1 209 aa10.17□□□□□ -0.78
CHMP4A-204ENST00000530996 REG3AQ06141 175 aa10.17□□□□□ -0.78
CHMP4A-204ENST00000530996 DAZAP1Q96EP5 407 aaKnown RBP10.17□□□□□ -0.78
CHMP4A-204ENST00000530996 DPH3Q96FX2 82 aa10.17□□□□□ -0.78
CHMP4A-204ENST00000530996 SSBP4Q9BWG4 385 aaPredicted RBP10.17□□□□□ -0.78
CHMP4A-204ENST00000530996 AP5S1Q9NUS5 200 aa10.17□□□□□ -0.78
CHMP4A-204ENST00000530996 UMAD1C9J7I0 102 aa10.16□□□□□ -0.78
CHMP4A-204ENST00000530996 PANO1I0J062 215 aa10.16□□□□□ -0.78
CHMP4A-204ENST00000530996 RPL35P42766 123 aaKnown RBP10.16□□□□□ -0.78
CHMP4A-204ENST00000530996 IQCJQ1A5X6 159 aa10.16□□□□□ -0.78
CHMP4A-204ENST00000530996 FER1L6-AS1Q8NA97 138 aa10.16□□□□□ -0.78
CHMP4A-204ENST00000530996 CLRN3Q8NCR9 226 aa10.16□□□□□ -0.78
CHMP4A-204ENST00000530996 MLST8Q9BVC4 326 aa10.16□□□□□ -0.78
CHMP4A-204ENST00000530996 H2AFB1P0C5Y9 115 aa10.15□□□□□ -0.78
CHMP4A-204ENST00000530996 GZMBP10144 247 aa10.15□□□□□ -0.78
CHMP4A-204ENST00000530996 RAB5CP51148 216 aa10.15□□□□□ -0.78
CHMP4A-204ENST00000530996 NKX2-5P52952 324 aaPredicted RBP10.15□□□□□ -0.78
CHMP4A-204ENST00000530996 SUMO4Q6EEV6 95 aa10.15□□□□□ -0.78
CHMP4A-204ENST00000530996 TMUB2Q71RG4 321 aa10.15□□□□□ -0.78
CHMP4A-204ENST00000530996 TMEM243Q9BU79 118 aa10.15□□□□□ -0.78
CHMP4A-204ENST00000530996 IGHV3-64A0A075B6Q5 118 aa10.14□□□□□ -0.79
CHMP4A-204ENST00000530996 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.14□□□□□ -0.79
CHMP4A-204ENST00000530996 KANTRA0A1W2PQU2 76 aa10.14□□□□□ -0.79
CHMP4A-204ENST00000530996 UBE2L6O14933 153 aa10.14□□□□□ -0.79
CHMP4A-204ENST00000530996 ZNF345Q14585 488 aa10.14□□□□□ -0.79
CHMP4A-204ENST00000530996 WDR73Q6P4I2 378 aa10.14□□□□□ -0.79
CHMP4A-204ENST00000530996 OR2D3Q8NGH3 330 aa10.14□□□□□ -0.79
CHMP4A-204ENST00000530996 MBD3L1Q8WWY6 194 aa10.14□□□□□ -0.79
CHMP4A-204ENST00000530996 KIF25-AS1Q9Y6Z4 181 aa10.14□□□□□ -0.79
CHMP4A-204ENST00000530996 SULT1A2P50226 295 aa10.13□□□□□ -0.79
CHMP4A-204ENST00000530996 RGS21Q2M5E4 152 aa10.13□□□□□ -0.79
CHMP4A-204ENST00000530996 CENPWQ5EE01 88 aa10.13□□□□□ -0.79
CHMP4A-204ENST00000530996 KRTAP26-1Q6PEX3 210 aa10.13□□□□□ -0.79
CHMP4A-204ENST00000530996 SDIM1Q6ZPB5 146 aa10.13□□□□□ -0.79
CHMP4A-204ENST00000530996 GNG13Q9P2W3 67 aa10.13□□□□□ -0.79
CHMP4A-204ENST00000530996 FAT3Q8TDW7 4589 aa10.13□□□□□ -0.79
CHMP4A-204ENST00000530996 UBR4Q5T4S7 5183 aa10.12□□□□□ -0.79
CHMP4A-204ENST00000530996 TRAV8-4A0A0B4J246 113 aa10.12□□□□□ -0.79
CHMP4A-204ENST00000530996 M0QY20 66 aa10.12□□□□□ -0.79
CHMP4A-204ENST00000530996 BCL2L11O43521 198 aa10.12□□□□□ -0.79
CHMP4A-204ENST00000530996 P01737 135 aa10.12□□□□□ -0.79
CHMP4A-204ENST00000530996 RPS20P60866 119 aaKnown RBP10.12□□□□□ -0.79
CHMP4A-204ENST00000530996 CNBPP62633 177 aaKnown RBP10.12□□□□□ -0.79
CHMP4A-204ENST00000530996 MANBALQ9NQG1 85 aa10.12□□□□□ -0.79
CHMP4A-204ENST00000530996 IGLV4-60A0A075B6I1 120 aa10.11□□□□□ -0.79
CHMP4A-204ENST00000530996 XKRY2A2RUG3 117 aa10.11□□□□□ -0.79
CHMP4A-204ENST00000530996 CHTF8P0CG12 524 aa10.11□□□□□ -0.79
CHMP4A-204ENST00000530996 AMTP48728 403 aa10.11□□□□□ -0.79
CHMP4A-204ENST00000530996 CACNG7P62955 275 aa10.11□□□□□ -0.79
CHMP4A-204ENST00000530996 RASL11AQ6T310 242 aa10.11□□□□□ -0.79
CHMP4A-204ENST00000530996 C20orf203Q8NBC4 194 aa10.11□□□□□ -0.79
CHMP4A-204ENST00000530996 IGKV3OR2-268A0A0C4DH90 116 aa10.1□□□□□ -0.79
CHMP4A-204ENST00000530996 TRGC1P0CF51 173 aa10.1□□□□□ -0.79
CHMP4A-204ENST00000530996 EIF5AP63241 154 aaKnown RBP10.1□□□□□ -0.79
CHMP4A-204ENST00000530996 GFRA4Q9GZZ7 299 aa10.1□□□□□ -0.79
CHMP4A-204ENST00000530996 PKHD1L1Q86WI1 4243 aa10.09□□□□□ -0.79
CHMP4A-204ENST00000530996 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
CHMP4A-204ENST00000530996 GNG4P50150 75 aa10.09□□□□□ -0.79
CHMP4A-204ENST00000530996 COTL1Q14019 142 aa10.09□□□□□ -0.79
CHMP4A-204ENST00000530996 Q6ZRU5 148 aa10.09□□□□□ -0.79
CHMP4A-204ENST00000530996 C11orf52Q96A22 123 aa10.09□□□□□ -0.79
CHMP4A-204ENST00000530996 DPH3P1Q9H4G8 78 aa10.09□□□□□ -0.79
CHMP4A-204ENST00000530996 A0A087WYN8 130 aa10.08□□□□□ -0.8
CHMP4A-204ENST00000530996 IFNA1P01562 189 aa10.08□□□□□ -0.8
CHMP4A-204ENST00000530996 CIRBPQ14011 172 aaKnown RBP10.08□□□□□ -0.8
CHMP4A-204ENST00000530996 SPACA4Q8TDM5 124 aa10.08□□□□□ -0.8
CHMP4A-204ENST00000530996 C7orf33Q8WU49 177 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms