RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 MT-ND6P03923 174 aa7.5□□□□□ -1.21
SOX6-213ENST00000530378 ZFP2Q6ZN57 461 aa7.5□□□□□ -1.21
SOX6-213ENST00000530378 SLC25A29Q8N8R3 303 aa7.5□□□□□ -1.21
SOX6-213ENST00000530378 NDUFAF3Q9BU61 184 aa7.5□□□□□ -1.21
SOX6-213ENST00000530378 TRAV26-1A0A087WT03 109 aa7.49□□□□□ -1.21
SOX6-213ENST00000530378 K7EQD1 137 aa7.49□□□□□ -1.21
SOX6-213ENST00000530378 NPYP01303 97 aa7.49□□□□□ -1.21
SOX6-213ENST00000530378 SRIP30626 198 aa7.49□□□□□ -1.21
SOX6-213ENST00000530378 STARD9Q9P2P6 4700 aa7.49□□□□□ -1.21
SOX6-213ENST00000530378 DEFB131BA0A096LNP1 70 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 A0A096LPF7 62 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 M0QY20 66 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 IQCJQ1A5X6 159 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 COX19Q49B96 90 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 OR10J3Q5JRS4 329 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 NEGR1Q7Z3B1 354 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 PRELID3AQ96N28 172 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 C18orf15Q96N68 181 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 HHLA3Q9XRX5 114 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 LOC389332A0A1B0GUA5 103 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 GAGE12JA6NER3 117 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 GAGE1Q13065 139 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 GAGE4Q13068 117 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 GAGE5Q13069 117 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 GAGE13Q4V321 117 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 ORMDL3Q8N138 153 aa7.48□□□□□ -1.21
SOX6-213ENST00000530378 IGHV3-38A0A0C4DH36 116 aa7.47□□□□□ -1.21
SOX6-213ENST00000530378 GYPEP15421 78 aa7.47□□□□□ -1.21
SOX6-213ENST00000530378 NRACQ8N912 160 aa7.47□□□□□ -1.21
SOX6-213ENST00000530378 NEXN-AS1Q8NBZ9 246 aa7.47□□□□□ -1.21
SOX6-213ENST00000530378 MRAP2Q96G30 205 aa7.47□□□□□ -1.21
SOX6-213ENST00000530378 DYNC2H1Q8NCM8 4307 aaKnown RBP7.46□□□□□ -1.21
SOX6-213ENST00000530378 PHOX2AO14813 284 aa7.46□□□□□ -1.21
SOX6-213ENST00000530378 PAX4O43316 350 aa7.46□□□□□ -1.21
SOX6-213ENST00000530378 TNFRSF6BO95407 300 aa7.46□□□□□ -1.21
SOX6-213ENST00000530378 CRYBA4P53673 196 aa7.46□□□□□ -1.21
SOX6-213ENST00000530378 PLECQ15149 4684 aaKnown RBP7.46□□□□□ -1.21
SOX6-213ENST00000530378 RHOHQ15669 191 aa7.46□□□□□ -1.21
SOX6-213ENST00000530378 PHLDA1Q8WV24 401 aaPredicted RBP7.46□□□□□ -1.21
SOX6-213ENST00000530378 VSIG2Q96IQ7 327 aa7.46□□□□□ -1.21
SOX6-213ENST00000530378 ALKBH7Q9BT30 221 aaPredicted RBP7.46□□□□□ -1.21
SOX6-213ENST00000530378 TENM2Q9NT68 2774 aa7.46□□□□□ -1.22
SOX6-213ENST00000530378 TRAV10A0A0B4J240 114 aa7.45□□□□□ -1.22
SOX6-213ENST00000530378 H7C1H1 209 aa7.45□□□□□ -1.22
SOX6-213ENST00000530378 ZNRF2Q8NHG8 242 aa7.45□□□□□ -1.22
SOX6-213ENST00000530378 PRO0255Q9UI72 69 aa7.45□□□□□ -1.22
SOX6-213ENST00000530378 LYSTQ99698 3801 aa7.45□□□□□ -1.22
SOX6-213ENST00000530378 TRBV6-4A0A1B0GX49 114 aa7.45□□□□□ -1.22
SOX6-213ENST00000530378 ZFAND6Q6FIF0 208 aa7.45□□□□□ -1.22
SOX6-213ENST00000530378 PRADC1Q9BSG0 188 aa7.45□□□□□ -1.22
SOX6-213ENST00000530378 NUDT3O95989 172 aa7.44□□□□□ -1.22
SOX6-213ENST00000530378 ST20Q9HBF5 79 aa7.44□□□□□ -1.22
SOX6-213ENST00000530378 NIT2Q9NQR4 276 aa7.44□□□□□ -1.22
SOX6-213ENST00000530378 TNFRSF18Q9Y5U5 241 aa7.44□□□□□ -1.22
SOX6-213ENST00000530378 KMT2CQ8NEZ4 4911 aaKnown RBP7.44□□□□□ -1.22
SOX6-213ENST00000530378 SDHAF1A6NFY7 115 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 C1orf196B1AJZ1 125 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 IGLL5B9A064 214 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 HIST1H2BKO60814 126 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 PPBPP02775 128 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 HIST1H2BJP06899 126 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 HIST1H2BOP23527 126 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 HIST1H2BBP33778 126 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 HIST1H2BDP58876 126 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 SUMO2P61956 95 aaKnown RBP7.43□□□□□ -1.22
SOX6-213ENST00000530378 HIST1H2BCP62807 126 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 HIST2H2BEQ16778 126 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.43□□□□□ -1.22
SOX6-213ENST00000530378 C18orf32Q8TCD1 76 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 HIST1H2BHQ93079 126 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 HIST1H2BNQ99877 126 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 HIST1H2BMQ99879 126 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 CIDEAO60543 219 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 RPL36AP83881 106 aaKnown RBP7.43□□□□□ -1.22
SOX6-213ENST00000530378 RPL36ALQ969Q0 106 aaKnown RBP7.43□□□□□ -1.22
SOX6-213ENST00000530378 MAP1LC3AQ9H492 121 aa7.43□□□□□ -1.22
SOX6-213ENST00000530378 TRBV7-3A0A075B6L6 115 aa7.42□□□□□ -1.22
SOX6-213ENST00000530378 IFI27P40305 119 aaPredicted RBP7.42□□□□□ -1.22
SOX6-213ENST00000530378 TMEM70Q9BUB7 260 aa7.42□□□□□ -1.22
SOX6-213ENST00000530378 TRBV10-1A0A0K0K1A3 114 aa7.41□□□□□ -1.22
SOX6-213ENST00000530378 TCAPO15273 167 aa7.41□□□□□ -1.22
SOX6-213ENST00000530378 UBE2D3P61077 147 aa7.41□□□□□ -1.22
SOX6-213ENST00000530378 UBE2D2P62837 147 aa7.41□□□□□ -1.22
SOX6-213ENST00000530378 RNASEKQ6P5S7 137 aaKnown RBP7.41□□□□□ -1.22
SOX6-213ENST00000530378 SMIM2Q9BVW6 85 aa7.41□□□□□ -1.22
SOX6-213ENST00000530378 ICOSQ9Y6W8 199 aa7.41□□□□□ -1.22
SOX6-213ENST00000530378 RAB5BP61020 215 aa7.41□□□□□ -1.22
SOX6-213ENST00000530378 BAGE3Q86Y29 109 aa7.41□□□□□ -1.22
SOX6-213ENST00000530378 RYR3Q15413 4870 aa7.4□□□□□ -1.22
SOX6-213ENST00000530378 TRBV6-5A0A0K0K1A5 114 aa7.4□□□□□ -1.23
SOX6-213ENST00000530378 LINC00694P0DN24 101 aa7.4□□□□□ -1.23
SOX6-213ENST00000530378 PMCHP20382 165 aa7.4□□□□□ -1.23
SOX6-213ENST00000530378 PRSS3P2Q8NHM4 247 aa7.4□□□□□ -1.23
SOX6-213ENST00000530378 DNAJC30Q96LL9 226 aa7.4□□□□□ -1.23
SOX6-213ENST00000530378 LAMTOR2Q9Y2Q5 125 aa7.4□□□□□ -1.23
SOX6-213ENST00000530378 PPP1R17O96001 155 aa7.39□□□□□ -1.23
SOX6-213ENST00000530378 POLR2KP53803 58 aaKnown RBP7.39□□□□□ -1.23
SOX6-213ENST00000530378 NDUFA6P56556 154 aa7.39□□□□□ -1.23
SOX6-213ENST00000530378 PMCHL1Q16048 86 aa7.39□□□□□ -1.23
SOX6-213ENST00000530378 ATP6V0E2Q8NHE4 81 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms